Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G48380

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0071327: cellular response to trehalose stimulus0.00E+00
2GO:0043048: dolichyl monophosphate biosynthetic process0.00E+00
3GO:0098755: maintenance of seed dormancy by absisic acid0.00E+00
4GO:1900367: positive regulation of defense response to insect0.00E+00
5GO:0006990: positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response0.00E+00
6GO:0002376: immune system process0.00E+00
7GO:0006983: ER overload response0.00E+00
8GO:0010324: membrane invagination0.00E+00
9GO:0006468: protein phosphorylation6.00E-08
10GO:0009626: plant-type hypersensitive response1.17E-06
11GO:0035556: intracellular signal transduction1.67E-06
12GO:0019725: cellular homeostasis2.10E-06
13GO:0015696: ammonium transport1.76E-05
14GO:0000187: activation of MAPK activity1.76E-05
15GO:0018105: peptidyl-serine phosphorylation3.02E-05
16GO:0060548: negative regulation of cell death3.23E-05
17GO:0072488: ammonium transmembrane transport3.23E-05
18GO:0034052: positive regulation of plant-type hypersensitive response5.18E-05
19GO:0010200: response to chitin5.53E-05
20GO:0031348: negative regulation of defense response7.99E-05
21GO:2000037: regulation of stomatal complex patterning1.06E-04
22GO:0010365: positive regulation of ethylene biosynthetic process2.11E-04
23GO:0019567: arabinose biosynthetic process2.11E-04
24GO:0015969: guanosine tetraphosphate metabolic process2.11E-04
25GO:0010482: regulation of epidermal cell division2.11E-04
26GO:1901183: positive regulation of camalexin biosynthetic process2.11E-04
27GO:0009270: response to humidity2.11E-04
28GO:2000031: regulation of salicylic acid mediated signaling pathway2.22E-04
29GO:0030968: endoplasmic reticulum unfolded protein response2.22E-04
30GO:0046777: protein autophosphorylation3.98E-04
31GO:0010618: aerenchyma formation4.71E-04
32GO:0080181: lateral root branching4.71E-04
33GO:0044419: interspecies interaction between organisms4.71E-04
34GO:0031349: positive regulation of defense response4.71E-04
35GO:0051258: protein polymerization4.71E-04
36GO:0043066: negative regulation of apoptotic process4.71E-04
37GO:0080151: positive regulation of salicylic acid mediated signaling pathway4.71E-04
38GO:0042742: defense response to bacterium5.15E-04
39GO:0010229: inflorescence development5.67E-04
40GO:0018107: peptidyl-threonine phosphorylation5.67E-04
41GO:0009266: response to temperature stimulus6.38E-04
42GO:0015695: organic cation transport7.67E-04
43GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway7.67E-04
44GO:0034051: negative regulation of plant-type hypersensitive response7.67E-04
45GO:1900140: regulation of seedling development7.67E-04
46GO:0045793: positive regulation of cell size7.67E-04
47GO:0010186: positive regulation of cellular defense response7.67E-04
48GO:0007166: cell surface receptor signaling pathway8.29E-04
49GO:0009737: response to abscisic acid8.56E-04
50GO:0072334: UDP-galactose transmembrane transport1.09E-03
51GO:0015749: monosaccharide transport1.09E-03
52GO:0072583: clathrin-dependent endocytosis1.09E-03
53GO:0002679: respiratory burst involved in defense response1.09E-03
54GO:0048530: fruit morphogenesis1.09E-03
55GO:0006986: response to unfolded protein1.09E-03
56GO:0010116: positive regulation of abscisic acid biosynthetic process1.09E-03
57GO:0048194: Golgi vesicle budding1.09E-03
58GO:0009814: defense response, incompatible interaction1.15E-03
59GO:0071456: cellular response to hypoxia1.15E-03
60GO:0010227: floral organ abscission1.25E-03
61GO:0045227: capsule polysaccharide biosynthetic process1.45E-03
62GO:0010483: pollen tube reception1.45E-03
63GO:0033358: UDP-L-arabinose biosynthetic process1.45E-03
64GO:0051567: histone H3-K9 methylation1.45E-03
65GO:2000038: regulation of stomatal complex development1.45E-03
66GO:0080142: regulation of salicylic acid biosynthetic process1.45E-03
67GO:0080167: response to karrikin1.80E-03
68GO:0010225: response to UV-C1.85E-03
69GO:0009697: salicylic acid biosynthetic process1.85E-03
70GO:0009749: response to glucose1.97E-03
71GO:0009742: brassinosteroid mediated signaling pathway2.08E-03
72GO:0006574: valine catabolic process2.28E-03
73GO:0010942: positive regulation of cell death2.28E-03
74GO:0007165: signal transduction2.57E-03
75GO:0006904: vesicle docking involved in exocytosis2.70E-03
76GO:0010310: regulation of hydrogen peroxide metabolic process2.74E-03
77GO:2000067: regulation of root morphogenesis2.74E-03
78GO:0009094: L-phenylalanine biosynthetic process2.74E-03
79GO:0031930: mitochondria-nucleus signaling pathway2.74E-03
80GO:0010199: organ boundary specification between lateral organs and the meristem2.74E-03
81GO:0010555: response to mannitol2.74E-03
82GO:0001666: response to hypoxia3.03E-03
83GO:0009751: response to salicylic acid3.20E-03
84GO:0043090: amino acid import3.23E-03
85GO:0071446: cellular response to salicylic acid stimulus3.23E-03
86GO:1902074: response to salt3.23E-03
87GO:0009408: response to heat3.26E-03
88GO:0035265: organ growth3.74E-03
89GO:0009787: regulation of abscisic acid-activated signaling pathway3.74E-03
90GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline3.74E-03
91GO:0016049: cell growth3.75E-03
92GO:0010150: leaf senescence3.87E-03
93GO:0008219: cell death3.94E-03
94GO:0007186: G-protein coupled receptor signaling pathway4.29E-03
95GO:0009617: response to bacterium4.84E-03
96GO:0046685: response to arsenic-containing substance4.85E-03
97GO:0006098: pentose-phosphate shunt4.85E-03
98GO:0051865: protein autoubiquitination4.85E-03
99GO:0010112: regulation of systemic acquired resistance4.85E-03
100GO:0009056: catabolic process4.85E-03
101GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway5.44E-03
102GO:1900426: positive regulation of defense response to bacterium5.44E-03
103GO:0043069: negative regulation of programmed cell death6.06E-03
104GO:0000038: very long-chain fatty acid metabolic process6.69E-03
105GO:0000209: protein polyubiquitination6.69E-03
106GO:0019684: photosynthesis, light reaction6.69E-03
107GO:0009750: response to fructose6.69E-03
108GO:0048765: root hair cell differentiation6.69E-03
109GO:0012501: programmed cell death7.36E-03
110GO:0002213: defense response to insect7.36E-03
111GO:0010105: negative regulation of ethylene-activated signaling pathway7.36E-03
112GO:0006890: retrograde vesicle-mediated transport, Golgi to ER7.36E-03
113GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process7.79E-03
114GO:0000165: MAPK cascade7.79E-03
115GO:0055046: microgametogenesis8.04E-03
116GO:0006952: defense response8.24E-03
117GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway9.25E-03
118GO:0009225: nucleotide-sugar metabolic process9.48E-03
119GO:0042343: indole glucosinolate metabolic process9.48E-03
120GO:0010167: response to nitrate9.48E-03
121GO:0070588: calcium ion transmembrane transport9.48E-03
122GO:0010053: root epidermal cell differentiation9.48E-03
123GO:0034976: response to endoplasmic reticulum stress1.02E-02
124GO:0080147: root hair cell development1.10E-02
125GO:0051302: regulation of cell division1.18E-02
126GO:0010026: trichome differentiation1.18E-02
127GO:0009624: response to nematode1.24E-02
128GO:0098542: defense response to other organism1.26E-02
129GO:0010431: seed maturation1.26E-02
130GO:2000022: regulation of jasmonic acid mediated signaling pathway1.34E-02
131GO:0006012: galactose metabolic process1.43E-02
132GO:0009625: response to insect1.43E-02
133GO:0009306: protein secretion1.52E-02
134GO:0009789: positive regulation of abscisic acid-activated signaling pathway1.61E-02
135GO:0009741: response to brassinosteroid1.79E-02
136GO:0046323: glucose import1.79E-02
137GO:0008654: phospholipid biosynthetic process1.98E-02
138GO:0071554: cell wall organization or biogenesis2.08E-02
139GO:0002229: defense response to oomycetes2.08E-02
140GO:0019760: glucosinolate metabolic process2.38E-02
141GO:0006464: cellular protein modification process2.38E-02
142GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process2.40E-02
143GO:0006470: protein dephosphorylation2.45E-02
144GO:0010286: heat acclimation2.49E-02
145GO:0009911: positive regulation of flower development2.70E-02
146GO:0010029: regulation of seed germination2.81E-02
147GO:0009816: defense response to bacterium, incompatible interaction2.81E-02
148GO:0009627: systemic acquired resistance2.92E-02
149GO:0048573: photoperiodism, flowering3.04E-02
150GO:0006950: response to stress3.04E-02
151GO:0015031: protein transport3.21E-02
152GO:0010311: lateral root formation3.38E-02
153GO:0009832: plant-type cell wall biogenesis3.38E-02
154GO:0007568: aging3.62E-02
155GO:0006865: amino acid transport3.74E-02
156GO:0045087: innate immune response3.86E-02
157GO:0006897: endocytosis4.37E-02
158GO:0006887: exocytosis4.37E-02
159GO:0051707: response to other organism4.63E-02
160GO:0009744: response to sucrose4.63E-02
161GO:0042546: cell wall biogenesis4.76E-02
RankGO TermAdjusted P value
1GO:0005358: high-affinity hydrogen:glucose symporter activity0.00E+00
2GO:0004168: dolichol kinase activity0.00E+00
3GO:0004674: protein serine/threonine kinase activity1.05E-07
4GO:0016301: kinase activity1.37E-07
5GO:0004672: protein kinase activity2.09E-06
6GO:0005524: ATP binding2.43E-06
7GO:0008519: ammonium transmembrane transporter activity7.64E-05
8GO:0004708: MAP kinase kinase activity1.78E-04
9GO:0004714: transmembrane receptor protein tyrosine kinase activity1.78E-04
10GO:0009679: hexose:proton symporter activity2.11E-04
11GO:0032050: clathrin heavy chain binding2.11E-04
12GO:0015085: calcium ion transmembrane transporter activity2.11E-04
13GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity2.11E-04
14GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity2.11E-04
15GO:0004713: protein tyrosine kinase activity3.76E-04
16GO:0009931: calcium-dependent protein serine/threonine kinase activity3.77E-04
17GO:0004683: calmodulin-dependent protein kinase activity4.04E-04
18GO:0015036: disulfide oxidoreductase activity4.71E-04
19GO:0008728: GTP diphosphokinase activity4.71E-04
20GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity7.67E-04
21GO:0031683: G-protein beta/gamma-subunit complex binding7.67E-04
22GO:0001664: G-protein coupled receptor binding7.67E-04
23GO:0033612: receptor serine/threonine kinase binding1.05E-03
24GO:0004664: prephenate dehydratase activity1.45E-03
25GO:0050373: UDP-arabinose 4-epimerase activity1.45E-03
26GO:0047769: arogenate dehydratase activity1.45E-03
27GO:0005459: UDP-galactose transmembrane transporter activity1.85E-03
28GO:0015145: monosaccharide transmembrane transporter activity1.85E-03
29GO:0070696: transmembrane receptor protein serine/threonine kinase binding1.85E-03
30GO:0004605: phosphatidate cytidylyltransferase activity2.28E-03
31GO:0004871: signal transducer activity2.55E-03
32GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity2.70E-03
33GO:0004012: phospholipid-translocating ATPase activity2.74E-03
34GO:0003978: UDP-glucose 4-epimerase activity2.74E-03
35GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity2.74E-03
36GO:0004656: procollagen-proline 4-dioxygenase activity2.74E-03
37GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.54E-03
38GO:0004806: triglyceride lipase activity3.56E-03
39GO:0005544: calcium-dependent phospholipid binding3.74E-03
40GO:0005516: calmodulin binding3.96E-03
41GO:0005509: calcium ion binding5.78E-03
42GO:0005543: phospholipid binding6.69E-03
43GO:0005198: structural molecule activity7.22E-03
44GO:0015198: oligopeptide transporter activity7.36E-03
45GO:0005388: calcium-transporting ATPase activity8.04E-03
46GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism8.04E-03
47GO:0031072: heat shock protein binding8.04E-03
48GO:0004190: aspartic-type endopeptidase activity9.48E-03
49GO:0031418: L-ascorbic acid binding1.10E-02
50GO:0004707: MAP kinase activity1.26E-02
51GO:0019706: protein-cysteine S-palmitoyltransferase activity1.26E-02
52GO:0003924: GTPase activity1.46E-02
53GO:0005525: GTP binding1.65E-02
54GO:0008565: protein transporter activity1.86E-02
55GO:0015144: carbohydrate transmembrane transporter activity1.86E-02
56GO:0005351: sugar:proton symporter activity2.10E-02
57GO:0016413: O-acetyltransferase activity2.59E-02
58GO:0016597: amino acid binding2.59E-02
59GO:0008375: acetylglucosaminyltransferase activity2.92E-02
60GO:0046982: protein heterodimerization activity3.26E-02
61GO:0015238: drug transmembrane transporter activity3.38E-02
62GO:0004842: ubiquitin-protein transferase activity3.62E-02
63GO:0043531: ADP binding3.64E-02
64GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors3.86E-02
65GO:0004712: protein serine/threonine/tyrosine kinase activity4.11E-02
66GO:0061630: ubiquitin protein ligase activity4.32E-02
67GO:0005515: protein binding4.45E-02
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Gene type



Gene DE type