Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G46570

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0034337: RNA folding0.00E+00
2GO:0006982: response to lipid hydroperoxide0.00E+00
3GO:0002184: cytoplasmic translational termination0.00E+00
4GO:0010335: response to non-ionic osmotic stress0.00E+00
5GO:1901918: negative regulation of exoribonuclease activity0.00E+00
6GO:0016553: base conversion or substitution editing0.00E+00
7GO:0090279: regulation of calcium ion import0.00E+00
8GO:2000042: negative regulation of double-strand break repair via homologous recombination0.00E+00
9GO:0071474: cellular hyperosmotic response0.00E+00
10GO:0015995: chlorophyll biosynthetic process2.00E-08
11GO:0055114: oxidation-reduction process1.86E-05
12GO:0006021: inositol biosynthetic process9.33E-05
13GO:0010207: photosystem II assembly1.21E-04
14GO:0010027: thylakoid membrane organization1.21E-04
15GO:0009904: chloroplast accumulation movement1.45E-04
16GO:0046855: inositol phosphate dephosphorylation2.07E-04
17GO:0009903: chloroplast avoidance movement2.80E-04
18GO:1902458: positive regulation of stomatal opening3.94E-04
19GO:0010362: negative regulation of anion channel activity by blue light3.94E-04
20GO:0015969: guanosine tetraphosphate metabolic process3.94E-04
21GO:0046467: membrane lipid biosynthetic process3.94E-04
22GO:1902478: negative regulation of defense response to bacterium, incompatible interaction3.94E-04
23GO:0031426: polycistronic mRNA processing3.94E-04
24GO:0043489: RNA stabilization3.94E-04
25GO:1904966: positive regulation of vitamin E biosynthetic process3.94E-04
26GO:0043953: protein transport by the Tat complex3.94E-04
27GO:0000481: maturation of 5S rRNA3.94E-04
28GO:0010426: DNA methylation on cytosine within a CHH sequence3.94E-04
29GO:1904964: positive regulation of phytol biosynthetic process3.94E-04
30GO:0065002: intracellular protein transmembrane transport3.94E-04
31GO:0043686: co-translational protein modification3.94E-04
32GO:0043087: regulation of GTPase activity3.94E-04
33GO:0071461: cellular response to redox state3.94E-04
34GO:0071277: cellular response to calcium ion3.94E-04
35GO:0046167: glycerol-3-phosphate biosynthetic process3.94E-04
36GO:0043007: maintenance of rDNA3.94E-04
37GO:0016559: peroxisome fission4.53E-04
38GO:0009704: de-etiolation4.53E-04
39GO:0044550: secondary metabolite biosynthetic process5.03E-04
40GO:0015979: photosynthesis5.55E-04
41GO:0010155: regulation of proton transport8.55E-04
42GO:0006729: tetrahydrobiopterin biosynthetic process8.55E-04
43GO:1903426: regulation of reactive oxygen species biosynthetic process8.55E-04
44GO:0015790: UDP-xylose transport8.55E-04
45GO:0030388: fructose 1,6-bisphosphate metabolic process8.55E-04
46GO:0051262: protein tetramerization8.55E-04
47GO:0080005: photosystem stoichiometry adjustment8.55E-04
48GO:0042819: vitamin B6 biosynthetic process8.55E-04
49GO:1902326: positive regulation of chlorophyll biosynthetic process8.55E-04
50GO:0010541: acropetal auxin transport8.55E-04
51GO:0006650: glycerophospholipid metabolic process8.55E-04
52GO:0009773: photosynthetic electron transport in photosystem I1.05E-03
53GO:0006790: sulfur compound metabolic process1.20E-03
54GO:0009658: chloroplast organization1.22E-03
55GO:0006094: gluconeogenesis1.36E-03
56GO:0000913: preprophase band assembly1.39E-03
57GO:0031022: nuclear migration along microfilament1.39E-03
58GO:0006000: fructose metabolic process1.39E-03
59GO:0034051: negative regulation of plant-type hypersensitive response1.39E-03
60GO:0046168: glycerol-3-phosphate catabolic process1.39E-03
61GO:0010160: formation of animal organ boundary1.39E-03
62GO:0044375: regulation of peroxisome size1.39E-03
63GO:0046621: negative regulation of organ growth1.39E-03
64GO:0009266: response to temperature stimulus1.53E-03
65GO:0046854: phosphatidylinositol phosphorylation1.71E-03
66GO:0006020: inositol metabolic process2.00E-03
67GO:0009152: purine ribonucleotide biosynthetic process2.00E-03
68GO:0046653: tetrahydrofolate metabolic process2.00E-03
69GO:0010239: chloroplast mRNA processing2.00E-03
70GO:0009052: pentose-phosphate shunt, non-oxidative branch2.00E-03
71GO:0033014: tetrapyrrole biosynthetic process2.00E-03
72GO:0008615: pyridoxine biosynthetic process2.00E-03
73GO:0043481: anthocyanin accumulation in tissues in response to UV light2.00E-03
74GO:0010731: protein glutathionylation2.00E-03
75GO:0006072: glycerol-3-phosphate metabolic process2.00E-03
76GO:0042823: pyridoxal phosphate biosynthetic process2.00E-03
77GO:2001141: regulation of RNA biosynthetic process2.00E-03
78GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly2.00E-03
79GO:0015994: chlorophyll metabolic process2.69E-03
80GO:0010600: regulation of auxin biosynthetic process2.69E-03
81GO:0010021: amylopectin biosynthetic process2.69E-03
82GO:0007623: circadian rhythm2.70E-03
83GO:0010017: red or far-red light signaling pathway2.81E-03
84GO:0000304: response to singlet oxygen3.44E-03
85GO:0006465: signal peptide processing3.44E-03
86GO:0006564: L-serine biosynthetic process3.44E-03
87GO:0010236: plastoquinone biosynthetic process3.44E-03
88GO:0045038: protein import into chloroplast thylakoid membrane3.44E-03
89GO:0031365: N-terminal protein amino acid modification3.44E-03
90GO:0009107: lipoate biosynthetic process3.44E-03
91GO:0006520: cellular amino acid metabolic process4.21E-03
92GO:0042549: photosystem II stabilization4.26E-03
93GO:0060918: auxin transport4.26E-03
94GO:1902456: regulation of stomatal opening4.26E-03
95GO:0009920: cell plate formation involved in plant-type cell wall biogenesis4.26E-03
96GO:0009791: post-embryonic development4.86E-03
97GO:0019252: starch biosynthetic process4.86E-03
98GO:0017148: negative regulation of translation5.13E-03
99GO:0010244: response to low fluence blue light stimulus by blue low-fluence system5.13E-03
100GO:0030488: tRNA methylation5.13E-03
101GO:1901259: chloroplast rRNA processing5.13E-03
102GO:0000054: ribosomal subunit export from nucleus5.13E-03
103GO:0010161: red light signaling pathway6.06E-03
104GO:0009772: photosynthetic electron transport in photosystem II6.06E-03
105GO:1900057: positive regulation of leaf senescence6.06E-03
106GO:0048437: floral organ development6.06E-03
107GO:0006400: tRNA modification6.06E-03
108GO:0006396: RNA processing6.43E-03
109GO:0007155: cell adhesion7.05E-03
110GO:0010928: regulation of auxin mediated signaling pathway7.05E-03
111GO:0032508: DNA duplex unwinding7.05E-03
112GO:0042255: ribosome assembly7.05E-03
113GO:2000070: regulation of response to water deprivation7.05E-03
114GO:0006353: DNA-templated transcription, termination7.05E-03
115GO:0009932: cell tip growth8.09E-03
116GO:0006002: fructose 6-phosphate metabolic process8.09E-03
117GO:0071482: cellular response to light stimulus8.09E-03
118GO:0015996: chlorophyll catabolic process8.09E-03
119GO:0007186: G-protein coupled receptor signaling pathway8.09E-03
120GO:0006526: arginine biosynthetic process8.09E-03
121GO:0009657: plastid organization8.09E-03
122GO:0032544: plastid translation8.09E-03
123GO:0009821: alkaloid biosynthetic process9.18E-03
124GO:0051865: protein autoubiquitination9.18E-03
125GO:0090305: nucleic acid phosphodiester bond hydrolysis9.18E-03
126GO:0090333: regulation of stomatal closure9.18E-03
127GO:0006783: heme biosynthetic process9.18E-03
128GO:0048507: meristem development9.18E-03
129GO:0006754: ATP biosynthetic process9.18E-03
130GO:0005975: carbohydrate metabolic process9.63E-03
131GO:0018298: protein-chromophore linkage9.86E-03
132GO:0009638: phototropism1.03E-02
133GO:0006779: porphyrin-containing compound biosynthetic process1.03E-02
134GO:0000160: phosphorelay signal transduction system1.04E-02
135GO:0006811: ion transport1.09E-02
136GO:0006535: cysteine biosynthetic process from serine1.15E-02
137GO:0043069: negative regulation of programmed cell death1.15E-02
138GO:0032259: methylation1.24E-02
139GO:0016051: carbohydrate biosynthetic process1.25E-02
140GO:0009637: response to blue light1.25E-02
141GO:0006352: DNA-templated transcription, initiation1.28E-02
142GO:0006415: translational termination1.28E-02
143GO:0034599: cellular response to oxidative stress1.31E-02
144GO:0008361: regulation of cell size1.41E-02
145GO:0016024: CDP-diacylglycerol biosynthetic process1.41E-02
146GO:0045037: protein import into chloroplast stroma1.41E-02
147GO:0006631: fatty acid metabolic process1.49E-02
148GO:0009725: response to hormone1.54E-02
149GO:0009767: photosynthetic electron transport chain1.54E-02
150GO:0005986: sucrose biosynthetic process1.54E-02
151GO:0030048: actin filament-based movement1.54E-02
152GO:0009785: blue light signaling pathway1.54E-02
153GO:0018107: peptidyl-threonine phosphorylation1.54E-02
154GO:0009718: anthocyanin-containing compound biosynthetic process1.54E-02
155GO:0010540: basipetal auxin transport1.68E-02
156GO:0034605: cellular response to heat1.68E-02
157GO:0010143: cutin biosynthetic process1.68E-02
158GO:0010020: chloroplast fission1.68E-02
159GO:0019253: reductive pentose-phosphate cycle1.68E-02
160GO:0007031: peroxisome organization1.82E-02
161GO:0042343: indole glucosinolate metabolic process1.82E-02
162GO:0019853: L-ascorbic acid biosynthetic process1.82E-02
163GO:0009636: response to toxic substance1.82E-02
164GO:0019762: glucosinolate catabolic process1.96E-02
165GO:0006636: unsaturated fatty acid biosynthetic process1.96E-02
166GO:0009833: plant-type primary cell wall biogenesis1.96E-02
167GO:0019344: cysteine biosynthetic process2.11E-02
168GO:0006289: nucleotide-excision repair2.11E-02
169GO:0010073: meristem maintenance2.27E-02
170GO:0006857: oligopeptide transport2.34E-02
171GO:0006810: transport2.40E-02
172GO:0098542: defense response to other organism2.43E-02
173GO:0061077: chaperone-mediated protein folding2.43E-02
174GO:0031408: oxylipin biosynthetic process2.43E-02
175GO:0006306: DNA methylation2.43E-02
176GO:0016226: iron-sulfur cluster assembly2.59E-02
177GO:0009735: response to cytokinin2.72E-02
178GO:0006817: phosphate ion transport2.92E-02
179GO:0048443: stamen development2.92E-02
180GO:0009306: protein secretion2.92E-02
181GO:0019722: calcium-mediated signaling2.92E-02
182GO:0009561: megagametogenesis2.92E-02
183GO:0006606: protein import into nucleus3.27E-02
184GO:0009741: response to brassinosteroid3.45E-02
185GO:0009958: positive gravitropism3.45E-02
186GO:0045489: pectin biosynthetic process3.45E-02
187GO:0010182: sugar mediated signaling pathway3.45E-02
188GO:0009646: response to absence of light3.63E-02
189GO:0015986: ATP synthesis coupled proton transport3.63E-02
190GO:0007018: microtubule-based movement3.63E-02
191GO:0010183: pollen tube guidance3.82E-02
192GO:0008654: phospholipid biosynthetic process3.82E-02
193GO:0000302: response to reactive oxygen species4.01E-02
194GO:0009058: biosynthetic process4.10E-02
195GO:0032502: developmental process4.20E-02
196GO:0007264: small GTPase mediated signal transduction4.20E-02
197GO:0016032: viral process4.20E-02
198GO:0009567: double fertilization forming a zygote and endosperm4.59E-02
199GO:0009639: response to red or far red light4.59E-02
200GO:0007267: cell-cell signaling4.79E-02
201GO:0006633: fatty acid biosynthetic process4.87E-02
202GO:0000910: cytokinesis5.00E-02
RankGO TermAdjusted P value
1GO:0102193: protein-ribulosamine 3-kinase activity0.00E+00
2GO:0035798: 2-alkenal reductase (NADP+) activity0.00E+00
3GO:0036033: mediator complex binding0.00E+00
4GO:0004740: pyruvate dehydrogenase (acetyl-transferring) kinase activity0.00E+00
5GO:0046406: magnesium protoporphyrin IX methyltransferase activity0.00E+00
6GO:0009673: low-affinity phosphate transmembrane transporter activity0.00E+00
7GO:0050278: sedoheptulose-bisphosphatase activity0.00E+00
8GO:0008942: nitrite reductase [NAD(P)H] activity0.00E+00
9GO:0016491: oxidoreductase activity2.84E-06
10GO:0052832: inositol monophosphate 3-phosphatase activity6.94E-06
11GO:0018708: thiol S-methyltransferase activity6.94E-06
12GO:0008934: inositol monophosphate 1-phosphatase activity6.94E-06
13GO:0052833: inositol monophosphate 4-phosphatase activity6.94E-06
14GO:0048027: mRNA 5'-UTR binding5.29E-05
15GO:0016851: magnesium chelatase activity5.29E-05
16GO:0000293: ferric-chelate reductase activity2.07E-04
17GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity2.80E-04
18GO:0019843: rRNA binding3.14E-04
19GO:0035671: enone reductase activity3.94E-04
20GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity3.94E-04
21GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity3.94E-04
22GO:0005227: calcium activated cation channel activity3.94E-04
23GO:0080132: fatty acid alpha-hydroxylase activity3.94E-04
24GO:0004325: ferrochelatase activity3.94E-04
25GO:0042586: peptide deformylase activity3.94E-04
26GO:0010313: phytochrome binding3.94E-04
27GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity3.94E-04
28GO:0010347: L-galactose-1-phosphate phosphatase activity3.94E-04
29GO:0009977: proton motive force dependent protein transmembrane transporter activity8.55E-04
30GO:0004617: phosphoglycerate dehydrogenase activity8.55E-04
31GO:0033201: alpha-1,4-glucan synthase activity8.55E-04
32GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity8.55E-04
33GO:0004081: bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity8.55E-04
34GO:0034432: bis(5'-adenosyl)-pentaphosphatase activity8.55E-04
35GO:0043024: ribosomal small subunit binding8.55E-04
36GO:0008728: GTP diphosphokinase activity8.55E-04
37GO:0005464: UDP-xylose transmembrane transporter activity8.55E-04
38GO:0036381: pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity8.55E-04
39GO:0050017: L-3-cyanoalanine synthase activity8.55E-04
40GO:0042389: omega-3 fatty acid desaturase activity8.55E-04
41GO:0042802: identical protein binding8.70E-04
42GO:0005506: iron ion binding1.24E-03
43GO:0004565: beta-galactosidase activity1.36E-03
44GO:0031072: heat shock protein binding1.36E-03
45GO:0010277: chlorophyllide a oxygenase [overall] activity1.39E-03
46GO:0005504: fatty acid binding1.39E-03
47GO:0004373: glycogen (starch) synthase activity1.39E-03
48GO:0003955: NAD(P)H dehydrogenase (quinone) activity1.39E-03
49GO:0016992: lipoate synthase activity1.39E-03
50GO:0004751: ribose-5-phosphate isomerase activity1.39E-03
51GO:0030267: glyoxylate reductase (NADP) activity1.39E-03
52GO:0016742: hydroxymethyl-, formyl- and related transferase activity1.39E-03
53GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity1.39E-03
54GO:0008864: formyltetrahydrofolate deformylase activity1.39E-03
55GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor1.39E-03
56GO:0008266: poly(U) RNA binding1.53E-03
57GO:0009882: blue light photoreceptor activity2.00E-03
58GO:0043023: ribosomal large subunit binding2.00E-03
59GO:0005528: FK506 binding2.12E-03
60GO:0001053: plastid sigma factor activity2.69E-03
61GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor2.69E-03
62GO:0070628: proteasome binding2.69E-03
63GO:0045430: chalcone isomerase activity2.69E-03
64GO:0016987: sigma factor activity2.69E-03
65GO:0009011: starch synthase activity2.69E-03
66GO:0043495: protein anchor2.69E-03
67GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen2.82E-03
68GO:0003755: peptidyl-prolyl cis-trans isomerase activity3.28E-03
69GO:0003729: mRNA binding3.33E-03
70GO:0003727: single-stranded RNA binding3.33E-03
71GO:0051287: NAD binding3.44E-03
72GO:0004332: fructose-bisphosphate aldolase activity4.26E-03
73GO:0031593: polyubiquitin binding4.26E-03
74GO:0004130: cytochrome-c peroxidase activity4.26E-03
75GO:0035673: oligopeptide transmembrane transporter activity4.26E-03
76GO:0004366: glycerol-3-phosphate O-acyltransferase activity4.26E-03
77GO:0042578: phosphoric ester hydrolase activity4.26E-03
78GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity4.26E-03
79GO:0004124: cysteine synthase activity5.13E-03
80GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity5.13E-03
81GO:0005261: cation channel activity5.13E-03
82GO:0003886: DNA (cytosine-5-)-methyltransferase activity5.13E-03
83GO:0009927: histidine phosphotransfer kinase activity5.13E-03
84GO:0048038: quinone binding5.21E-03
85GO:0004518: nuclease activity5.56E-03
86GO:0019899: enzyme binding6.06E-03
87GO:0016887: ATPase activity7.67E-03
88GO:0005525: GTP binding7.70E-03
89GO:0008135: translation factor activity, RNA binding8.09E-03
90GO:0008173: RNA methyltransferase activity8.09E-03
91GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water8.09E-03
92GO:0071949: FAD binding9.18E-03
93GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity1.03E-02
94GO:0016844: strictosidine synthase activity1.03E-02
95GO:0030234: enzyme regulator activity1.15E-02
96GO:0003746: translation elongation factor activity1.25E-02
97GO:0015198: oligopeptide transporter activity1.41E-02
98GO:0010329: auxin efflux transmembrane transporter activity1.54E-02
99GO:0005315: inorganic phosphate transmembrane transporter activity1.54E-02
100GO:0000155: phosphorelay sensor kinase activity1.54E-02
101GO:0004364: glutathione transferase activity1.55E-02
102GO:0003774: motor activity1.68E-02
103GO:0031624: ubiquitin conjugating enzyme binding1.68E-02
104GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.68E-02
105GO:0051537: 2 iron, 2 sulfur cluster binding1.75E-02
106GO:0035091: phosphatidylinositol binding1.75E-02
107GO:0019825: oxygen binding1.79E-02
108GO:0008168: methyltransferase activity2.07E-02
109GO:0043130: ubiquitin binding2.11E-02
110GO:0051536: iron-sulfur cluster binding2.11E-02
111GO:0003690: double-stranded DNA binding2.26E-02
112GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.59E-02
113GO:0020037: heme binding2.74E-02
114GO:0022891: substrate-specific transmembrane transporter activity2.75E-02
115GO:0016760: cellulose synthase (UDP-forming) activity2.75E-02
116GO:0051082: unfolded protein binding3.11E-02
117GO:0003723: RNA binding3.44E-02
118GO:0046933: proton-transporting ATP synthase activity, rotational mechanism3.45E-02
119GO:0010181: FMN binding3.63E-02
120GO:0042803: protein homodimerization activity3.76E-02
121GO:0004872: receptor activity3.82E-02
122GO:0016762: xyloglucan:xyloglucosyl transferase activity4.01E-02
123GO:0030170: pyridoxal phosphate binding4.32E-02
124GO:0000156: phosphorelay response regulator activity4.39E-02
125GO:0003684: damaged DNA binding4.59E-02
126GO:0003924: GTPase activity4.59E-02
127GO:0016791: phosphatase activity4.59E-02
128GO:0016759: cellulose synthase activity4.59E-02
129GO:0008565: protein transporter activity4.65E-02
130GO:0016787: hydrolase activity4.79E-02
131GO:0016722: oxidoreductase activity, oxidizing metal ions4.79E-02
132GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity4.79E-02
133GO:0016597: amino acid binding5.00E-02
<
Gene type



Gene DE type