co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G46250

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010729: positive regulation of hydrogen peroxide biosynthetic process	5.03E-05
2	GO:0006511: ubiquitin-dependent protein catabolic process	8.83E-05
3	GO:2000072: regulation of defense response to fungus, incompatible interaction	1.23E-04
4	GO:0006672: ceramide metabolic process	1.23E-04
5	GO:0006212: uracil catabolic process	1.23E-04
6	GO:0019483: beta-alanine biosynthetic process	1.23E-04
7	GO:0015865: purine nucleotide transport	1.23E-04
8	GO:0018345: protein palmitoylation	1.23E-04
9	GO:0080183: response to photooxidative stress	1.23E-04
10	GO:0018342: protein prenylation	2.11E-04
11	GO:0010498: proteasomal protein catabolic process	2.11E-04
12	GO:0055074: calcium ion homeostasis	2.11E-04
13	GO:0016117: carotenoid biosynthetic process	2.22E-04
14	GO:0046902: regulation of mitochondrial membrane permeability	3.09E-04
15	GO:0009963: positive regulation of flavonoid biosynthetic process	3.09E-04
16	GO:0010255: glucose mediated signaling pathway	3.09E-04
17	GO:0030163: protein catabolic process	3.67E-04
18	GO:0007166: cell surface receptor signaling pathway	3.99E-04
19	GO:0009823: cytokinin catabolic process	5.26E-04
20	GO:0046283: anthocyanin-containing compound metabolic process	5.26E-04
21	GO:0097428: protein maturation by iron-sulfur cluster transfer	5.26E-04
22	GO:0045040: protein import into mitochondrial outer membrane	6.44E-04
23	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	6.44E-04
24	GO:0009407: toxin catabolic process	6.61E-04
25	GO:0015937: coenzyme A biosynthetic process	8.97E-04
26	GO:0009636: response to toxic substance	1.07E-03
27	GO:0043562: cellular response to nitrogen levels	1.17E-03
28	GO:0007186: G-protein coupled receptor signaling pathway	1.17E-03
29	GO:0009657: plastid organization	1.17E-03
30	GO:0010204: defense response signaling pathway, resistance gene-independent	1.17E-03
31	GO:0046685: response to arsenic-containing substance	1.32E-03
32	GO:0043067: regulation of programmed cell death	1.47E-03
33	GO:0043069: negative regulation of programmed cell death	1.63E-03
34	GO:0005986: sucrose biosynthetic process	2.14E-03
35	GO:0010102: lateral root morphogenesis	2.14E-03
36	GO:0010540: basipetal auxin transport	2.32E-03
37	GO:0009266: response to temperature stimulus	2.32E-03
38	GO:0009934: regulation of meristem structural organization	2.32E-03
39	GO:0048768: root hair cell tip growth	2.32E-03
40	GO:0010223: secondary shoot formation	2.32E-03
41	GO:0000162: tryptophan biosynthetic process	2.69E-03
42	GO:0006487: protein N-linked glycosylation	2.88E-03
43	GO:0010187: negative regulation of seed germination	2.88E-03
44	GO:0080147: root hair cell development	2.88E-03
45	GO:0071456: cellular response to hypoxia	3.50E-03
46	GO:0030433: ubiquitin-dependent ERAD pathway	3.50E-03
47	GO:0009625: response to insect	3.71E-03
48	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	4.15E-03
49	GO:0016579: protein deubiquitination	6.59E-03
50	GO:0045454: cell redox homeostasis	7.00E-03
51	GO:0006950: response to stress	7.68E-03
52	GO:0008219: cell death	8.24E-03
53	GO:0048767: root hair elongation	8.53E-03
54	GO:0009813: flavonoid biosynthetic process	8.53E-03
55	GO:0048527: lateral root development	9.12E-03
56	GO:0009867: jasmonic acid mediated signaling pathway	9.73E-03
57	GO:0045087: innate immune response	9.73E-03
58	GO:0006839: mitochondrial transport	1.07E-02
59	GO:0006887: exocytosis	1.10E-02
60	GO:0006631: fatty acid metabolic process	1.10E-02
61	GO:0006357: regulation of transcription from RNA polymerase II promoter	1.15E-02
62	GO:0009926: auxin polar transport	1.16E-02
63	GO:0009644: response to high light intensity	1.23E-02
64	GO:0051603: proteolysis involved in cellular protein catabolic process	1.47E-02
65	GO:0009626: plant-type hypersensitive response	1.69E-02
66	GO:0009553: embryo sac development	1.80E-02
67	GO:0009742: brassinosteroid mediated signaling pathway	1.92E-02
68	GO:0009845: seed germination	2.29E-02
69	GO:0050832: defense response to fungus	2.45E-02
70	GO:0009739: response to gibberellin	2.95E-02
71	GO:0009414: response to water deprivation	3.04E-02
72	GO:0055114: oxidation-reduction process	3.05E-02
73	GO:0030154: cell differentiation	3.39E-02
74	GO:0009733: response to auxin	3.50E-02
75	GO:0009658: chloroplast organization	3.71E-02
76	GO:0080167: response to karrikin	4.32E-02
77	GO:0016192: vesicle-mediated transport	4.48E-02
78	GO:0006810: transport	4.56E-02
79	GO:0015979: photosynthesis	4.75E-02

Rank	GO Term	Adjusted P value
1	GO:0004140: dephospho-CoA kinase activity	0.00E+00
2	GO:0052684: L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity	0.00E+00
3	GO:0004157: dihydropyrimidinase activity	0.00E+00
4	GO:0001729: ceramide kinase activity	0.00E+00
5	GO:0018708: thiol S-methyltransferase activity	1.23E-04
6	GO:0004298: threonine-type endopeptidase activity	1.54E-04
7	GO:0052692: raffinose alpha-galactosidase activity	2.11E-04
8	GO:0004324: ferredoxin-NADP+ reductase activity	2.11E-04
9	GO:0004557: alpha-galactosidase activity	2.11E-04
10	GO:0005504: fatty acid binding	2.11E-04
11	GO:0050307: sucrose-phosphate phosphatase activity	2.11E-04
12	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.06E-04
13	GO:0004834: tryptophan synthase activity	4.15E-04
14	GO:0045430: chalcone isomerase activity	4.15E-04
15	GO:0004576: oligosaccharyl transferase activity	4.15E-04
16	GO:0009916: alternative oxidase activity	4.15E-04
17	GO:0019139: cytokinin dehydrogenase activity	5.26E-04
18	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	5.26E-04
19	GO:0005471: ATP:ADP antiporter activity	5.26E-04
20	GO:0036402: proteasome-activating ATPase activity	6.44E-04
21	GO:0004364: glutathione transferase activity	9.25E-04
22	GO:0005198: structural molecule activity	1.07E-03
23	GO:0003951: NAD+ kinase activity	1.17E-03
24	GO:0008794: arsenate reductase (glutaredoxin) activity	1.79E-03
25	GO:0008327: methyl-CpG binding	1.79E-03
26	GO:0015035: protein disulfide oxidoreductase activity	1.85E-03
27	GO:0008131: primary amine oxidase activity	2.32E-03
28	GO:0017025: TBP-class protein binding	2.50E-03
29	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	3.29E-03
30	GO:0004843: thiol-dependent ubiquitin-specific protease activity	5.32E-03
31	GO:0008233: peptidase activity	5.75E-03
32	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	7.00E-03
33	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	7.80E-03
34	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	9.12E-03
35	GO:0009055: electron carrier activity	9.26E-03
36	GO:0051537: 2 iron, 2 sulfur cluster binding	1.23E-02
37	GO:0016874: ligase activity	1.77E-02
38	GO:0003779: actin binding	1.80E-02
39	GO:0051082: unfolded protein binding	1.84E-02
40	GO:0005507: copper ion binding	2.19E-02
41	GO:0019825: oxygen binding	2.19E-02
42	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.20E-02
43	GO:0005516: calmodulin binding	2.32E-02
44	GO:0004252: serine-type endopeptidase activity	2.33E-02
45	GO:0030170: pyridoxal phosphate binding	2.33E-02
46	GO:0005509: calcium ion binding	2.88E-02
47	GO:0044212: transcription regulatory region DNA binding	3.12E-02
48	GO:0008168: methyltransferase activity	3.61E-02
49	GO:0000287: magnesium ion binding	3.66E-02
50	GO:0016491: oxidoreductase activity	4.09E-02
51	GO:0050660: flavin adenine dinucleotide binding	4.12E-02
52	GO:0004497: monooxygenase activity	4.32E-02