Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G45950

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0034337: RNA folding0.00E+00
2GO:0019685: photosynthesis, dark reaction0.00E+00
3GO:0002184: cytoplasmic translational termination0.00E+00
4GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation0.00E+00
5GO:0090470: shoot organ boundary specification0.00E+00
6GO:0016553: base conversion or substitution editing0.00E+00
7GO:0006428: isoleucyl-tRNA aminoacylation0.00E+00
8GO:0090279: regulation of calcium ion import0.00E+00
9GO:0018023: peptidyl-lysine trimethylation0.00E+00
10GO:0071474: cellular hyperosmotic response0.00E+00
11GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process0.00E+00
12GO:0015995: chlorophyll biosynthetic process9.83E-12
13GO:0010207: photosystem II assembly7.09E-08
14GO:0042549: photosystem II stabilization3.23E-06
15GO:0055114: oxidation-reduction process8.42E-06
16GO:0048564: photosystem I assembly1.33E-05
17GO:0006783: heme biosynthetic process2.63E-05
18GO:0006782: protoporphyrinogen IX biosynthetic process4.55E-05
19GO:2001141: regulation of RNA biosynthetic process4.74E-05
20GO:0006633: fatty acid biosynthetic process6.14E-05
21GO:0010021: amylopectin biosynthetic process8.40E-05
22GO:0015979: photosynthesis8.91E-05
23GO:0010143: cutin biosynthetic process1.06E-04
24GO:0045038: protein import into chloroplast thylakoid membrane1.31E-04
25GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway1.88E-04
26GO:1901259: chloroplast rRNA processing2.54E-04
27GO:0006631: fatty acid metabolic process3.29E-04
28GO:1902458: positive regulation of stomatal opening3.70E-04
29GO:1902478: negative regulation of defense response to bacterium, incompatible interaction3.70E-04
30GO:0043489: RNA stabilization3.70E-04
31GO:0043953: protein transport by the Tat complex3.70E-04
32GO:0015671: oxygen transport3.70E-04
33GO:1904966: positive regulation of vitamin E biosynthetic process3.70E-04
34GO:0000481: maturation of 5S rRNA3.70E-04
35GO:0015801: aromatic amino acid transport3.70E-04
36GO:1904964: positive regulation of phytol biosynthetic process3.70E-04
37GO:0065002: intracellular protein transmembrane transport3.70E-04
38GO:0043686: co-translational protein modification3.70E-04
39GO:0071482: cellular response to light stimulus5.06E-04
40GO:0032544: plastid translation5.06E-04
41GO:0009735: response to cytokinin5.57E-04
42GO:0006412: translation7.13E-04
43GO:0005982: starch metabolic process7.16E-04
44GO:0006779: porphyrin-containing compound biosynthetic process7.16E-04
45GO:0006729: tetrahydrobiopterin biosynthetic process8.05E-04
46GO:1903426: regulation of reactive oxygen species biosynthetic process8.05E-04
47GO:0051262: protein tetramerization8.05E-04
48GO:0035304: regulation of protein dephosphorylation8.05E-04
49GO:0010115: regulation of abscisic acid biosynthetic process8.05E-04
50GO:1902326: positive regulation of chlorophyll biosynthetic process8.05E-04
51GO:0018026: peptidyl-lysine monomethylation8.05E-04
52GO:0006435: threonyl-tRNA aminoacylation8.05E-04
53GO:0000256: allantoin catabolic process8.05E-04
54GO:0090342: regulation of cell aging8.05E-04
55GO:0080183: response to photooxidative stress8.05E-04
56GO:0010027: thylakoid membrane organization9.22E-04
57GO:0019684: photosynthesis, light reaction9.61E-04
58GO:0009089: lysine biosynthetic process via diaminopimelate9.61E-04
59GO:0009773: photosynthetic electron transport in photosystem I9.61E-04
60GO:0006352: DNA-templated transcription, initiation9.61E-04
61GO:0016024: CDP-diacylglycerol biosynthetic process1.10E-03
62GO:0005977: glycogen metabolic process1.30E-03
63GO:0010136: ureide catabolic process1.30E-03
64GO:0034051: negative regulation of plant-type hypersensitive response1.30E-03
65GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition1.30E-03
66GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly1.88E-03
67GO:0010371: regulation of gibberellin biosynthetic process1.88E-03
68GO:0009152: purine ribonucleotide biosynthetic process1.88E-03
69GO:0046653: tetrahydrofolate metabolic process1.88E-03
70GO:0009052: pentose-phosphate shunt, non-oxidative branch1.88E-03
71GO:0033014: tetrapyrrole biosynthetic process1.88E-03
72GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity1.88E-03
73GO:0006145: purine nucleobase catabolic process1.88E-03
74GO:0010731: protein glutathionylation1.88E-03
75GO:0006424: glutamyl-tRNA aminoacylation1.88E-03
76GO:0048511: rhythmic process2.35E-03
77GO:0009765: photosynthesis, light harvesting2.52E-03
78GO:0016123: xanthophyll biosynthetic process3.23E-03
79GO:0000304: response to singlet oxygen3.23E-03
80GO:0080110: sporopollenin biosynthetic process3.23E-03
81GO:0016120: carotene biosynthetic process3.23E-03
82GO:0032543: mitochondrial translation3.23E-03
83GO:0006564: L-serine biosynthetic process3.23E-03
84GO:0031365: N-terminal protein amino acid modification3.23E-03
85GO:0000470: maturation of LSU-rRNA3.99E-03
86GO:0006655: phosphatidylglycerol biosynthetic process3.99E-03
87GO:0019252: starch biosynthetic process4.43E-03
88GO:0010310: regulation of hydrogen peroxide metabolic process4.81E-03
89GO:0009955: adaxial/abaxial pattern specification4.81E-03
90GO:0030488: tRNA methylation4.81E-03
91GO:0009395: phospholipid catabolic process5.68E-03
92GO:0006614: SRP-dependent cotranslational protein targeting to membrane5.68E-03
93GO:0006400: tRNA modification5.68E-03
94GO:0016559: peroxisome fission6.61E-03
95GO:0005978: glycogen biosynthetic process6.61E-03
96GO:0032508: DNA duplex unwinding6.61E-03
97GO:2000070: regulation of response to water deprivation6.61E-03
98GO:0022900: electron transport chain7.58E-03
99GO:0015996: chlorophyll catabolic process7.58E-03
100GO:0007186: G-protein coupled receptor signaling pathway7.58E-03
101GO:0006526: arginine biosynthetic process7.58E-03
102GO:0090305: nucleic acid phosphodiester bond hydrolysis8.60E-03
103GO:0006098: pentose-phosphate shunt8.60E-03
104GO:0010206: photosystem II repair8.60E-03
105GO:0019432: triglyceride biosynthetic process8.60E-03
106GO:0009817: defense response to fungus, incompatible interaction8.97E-03
107GO:0010205: photoinhibition9.67E-03
108GO:0010629: negative regulation of gene expression1.08E-02
109GO:0006535: cysteine biosynthetic process from serine1.08E-02
110GO:0043069: negative regulation of programmed cell death1.08E-02
111GO:0045087: innate immune response1.14E-02
112GO:0008285: negative regulation of cell proliferation1.19E-02
113GO:0045037: protein import into chloroplast stroma1.32E-02
114GO:0009725: response to hormone1.44E-02
115GO:0006094: gluconeogenesis1.44E-02
116GO:0009266: response to temperature stimulus1.57E-02
117GO:0010020: chloroplast fission1.57E-02
118GO:0010025: wax biosynthetic process1.84E-02
119GO:0006636: unsaturated fatty acid biosynthetic process1.84E-02
120GO:0009658: chloroplast organization1.93E-02
121GO:0042254: ribosome biogenesis1.97E-02
122GO:0019344: cysteine biosynthetic process1.98E-02
123GO:0006289: nucleotide-excision repair1.98E-02
124GO:0010073: meristem maintenance2.12E-02
125GO:0008299: isoprenoid biosynthetic process2.12E-02
126GO:0006418: tRNA aminoacylation for protein translation2.12E-02
127GO:0007017: microtubule-based process2.12E-02
128GO:0005975: carbohydrate metabolic process2.14E-02
129GO:0046686: response to cadmium ion2.25E-02
130GO:0010431: seed maturation2.27E-02
131GO:0061077: chaperone-mediated protein folding2.27E-02
132GO:0031408: oxylipin biosynthetic process2.27E-02
133GO:0003333: amino acid transmembrane transport2.27E-02
134GO:0006096: glycolytic process2.36E-02
135GO:0019748: secondary metabolic process2.42E-02
136GO:0016226: iron-sulfur cluster assembly2.42E-02
137GO:0035428: hexose transmembrane transport2.42E-02
138GO:0080092: regulation of pollen tube growth2.42E-02
139GO:0010227: floral organ abscission2.58E-02
140GO:0010584: pollen exine formation2.73E-02
141GO:0016117: carotenoid biosynthetic process2.90E-02
142GO:0006396: RNA processing2.92E-02
143GO:0042335: cuticle development3.06E-02
144GO:0000413: protein peptidyl-prolyl isomerization3.06E-02
145GO:0046323: glucose import3.23E-02
146GO:0009741: response to brassinosteroid3.23E-02
147GO:0006520: cellular amino acid metabolic process3.23E-02
148GO:0010182: sugar mediated signaling pathway3.23E-02
149GO:0042752: regulation of circadian rhythm3.40E-02
150GO:0006629: lipid metabolic process4.09E-02
151GO:0009567: double fertilization forming a zygote and endosperm4.30E-02
152GO:0006397: mRNA processing4.31E-02
153GO:0010286: heat acclimation4.49E-02
154GO:0016126: sterol biosynthetic process4.87E-02
155GO:0009451: RNA modification4.99E-02
RankGO TermAdjusted P value
1GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity0.00E+00
2GO:0005048: signal sequence binding0.00E+00
3GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity0.00E+00
4GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity0.00E+00
5GO:0019144: ADP-sugar diphosphatase activity0.00E+00
6GO:0016631: enoyl-[acyl-carrier-protein] reductase activity0.00E+00
7GO:0071522: ureidoglycine aminohydrolase activity0.00E+00
8GO:0050613: delta14-sterol reductase activity0.00E+00
9GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity0.00E+00
10GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity0.00E+00
11GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity0.00E+00
12GO:0045435: lycopene epsilon cyclase activity0.00E+00
13GO:0004822: isoleucine-tRNA ligase activity0.00E+00
14GO:0004853: uroporphyrinogen decarboxylase activity0.00E+00
15GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity0.00E+00
16GO:0003858: 3-hydroxybutyrate dehydrogenase activity0.00E+00
17GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity0.00E+00
18GO:0008942: nitrite reductase [NAD(P)H] activity0.00E+00
19GO:0003755: peptidyl-prolyl cis-trans isomerase activity2.31E-07
20GO:0019843: rRNA binding2.92E-06
21GO:0008266: poly(U) RNA binding3.67E-06
22GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase6.16E-06
23GO:0005528: FK506 binding7.71E-06
24GO:0030267: glyoxylate reductase (NADP) activity2.16E-05
25GO:0070402: NADPH binding2.16E-05
26GO:0016851: magnesium chelatase activity4.74E-05
27GO:0016491: oxidoreductase activity5.03E-05
28GO:0001053: plastid sigma factor activity8.40E-05
29GO:0016987: sigma factor activity8.40E-05
30GO:0004366: glycerol-3-phosphate O-acyltransferase activity1.88E-04
31GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity2.54E-04
32GO:0005344: oxygen transporter activity3.70E-04
33GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity3.70E-04
34GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity3.70E-04
35GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity3.70E-04
36GO:0005227: calcium activated cation channel activity3.70E-04
37GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity3.70E-04
38GO:0004856: xylulokinase activity3.70E-04
39GO:0009496: plastoquinol--plastocyanin reductase activity3.70E-04
40GO:0080042: ADP-glucose pyrophosphohydrolase activity3.70E-04
41GO:0080132: fatty acid alpha-hydroxylase activity3.70E-04
42GO:0010242: oxygen evolving activity3.70E-04
43GO:0004325: ferrochelatase activity3.70E-04
44GO:0042586: peptide deformylase activity3.70E-04
45GO:0005080: protein kinase C binding3.70E-04
46GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity3.70E-04
47GO:0031957: very long-chain fatty acid-CoA ligase activity3.70E-04
48GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity3.70E-04
49GO:0003735: structural constituent of ribosome6.92E-04
50GO:0080041: ADP-ribose pyrophosphohydrolase activity8.05E-04
51GO:0009977: proton motive force dependent protein transmembrane transporter activity8.05E-04
52GO:0004617: phosphoglycerate dehydrogenase activity8.05E-04
53GO:0015173: aromatic amino acid transmembrane transporter activity8.05E-04
54GO:0003844: 1,4-alpha-glucan branching enzyme activity8.05E-04
55GO:0034432: bis(5'-adenosyl)-pentaphosphatase activity8.05E-04
56GO:0016630: protochlorophyllide reductase activity8.05E-04
57GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity8.05E-04
58GO:0004081: bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity8.05E-04
59GO:0004829: threonine-tRNA ligase activity8.05E-04
60GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity8.05E-04
61GO:0019156: isoamylase activity8.05E-04
62GO:0050017: L-3-cyanoalanine synthase activity8.05E-04
63GO:0042389: omega-3 fatty acid desaturase activity8.05E-04
64GO:0008864: formyltetrahydrofolate deformylase activity1.30E-03
65GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor1.30E-03
66GO:0043169: cation binding1.30E-03
67GO:0005504: fatty acid binding1.30E-03
68GO:0002161: aminoacyl-tRNA editing activity1.30E-03
69GO:0004148: dihydrolipoyl dehydrogenase activity1.30E-03
70GO:0003955: NAD(P)H dehydrogenase (quinone) activity1.30E-03
71GO:0004751: ribose-5-phosphate isomerase activity1.30E-03
72GO:0016742: hydroxymethyl-, formyl- and related transferase activity1.30E-03
73GO:0003993: acid phosphatase activity1.84E-03
74GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor1.88E-03
75GO:0043023: ribosomal large subunit binding1.88E-03
76GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor2.52E-03
77GO:0004045: aminoacyl-tRNA hydrolase activity2.52E-03
78GO:0070628: proteasome binding2.52E-03
79GO:0045430: chalcone isomerase activity2.52E-03
80GO:0043495: protein anchor2.52E-03
81GO:0016279: protein-lysine N-methyltransferase activity2.52E-03
82GO:0003729: mRNA binding2.66E-03
83GO:0051287: NAD binding3.06E-03
84GO:0003959: NADPH dehydrogenase activity3.23E-03
85GO:0016773: phosphotransferase activity, alcohol group as acceptor3.23E-03
86GO:0005275: amine transmembrane transporter activity3.23E-03
87GO:2001070: starch binding3.99E-03
88GO:0004332: fructose-bisphosphate aldolase activity3.99E-03
89GO:0031593: polyubiquitin binding3.99E-03
90GO:0004556: alpha-amylase activity3.99E-03
91GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity3.99E-03
92GO:0048038: quinone binding4.74E-03
93GO:0004124: cysteine synthase activity4.81E-03
94GO:0051920: peroxiredoxin activity4.81E-03
95GO:0102391: decanoate--CoA ligase activity4.81E-03
96GO:0005261: cation channel activity4.81E-03
97GO:0019899: enzyme binding5.68E-03
98GO:0004467: long-chain fatty acid-CoA ligase activity5.68E-03
99GO:0003723: RNA binding5.96E-03
100GO:0016787: hydrolase activity6.30E-03
101GO:0005525: GTP binding6.41E-03
102GO:0016209: antioxidant activity6.61E-03
103GO:0008312: 7S RNA binding6.61E-03
104GO:0043022: ribosome binding6.61E-03
105GO:0008173: RNA methyltransferase activity7.58E-03
106GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water7.58E-03
107GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity9.67E-03
108GO:0004743: pyruvate kinase activity9.67E-03
109GO:0030955: potassium ion binding9.67E-03
110GO:0003746: translation elongation factor activity1.14E-02
111GO:0003824: catalytic activity1.15E-02
112GO:0047372: acylglycerol lipase activity1.19E-02
113GO:0005089: Rho guanyl-nucleotide exchange factor activity1.19E-02
114GO:0000049: tRNA binding1.32E-02
115GO:0004565: beta-galactosidase activity1.44E-02
116GO:0004185: serine-type carboxypeptidase activity1.47E-02
117GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.57E-02
118GO:0051537: 2 iron, 2 sulfur cluster binding1.60E-02
119GO:0004601: peroxidase activity1.93E-02
120GO:0051536: iron-sulfur cluster binding1.98E-02
121GO:0004857: enzyme inhibitor activity1.98E-02
122GO:0043130: ubiquitin binding1.98E-02
123GO:0003899: DNA-directed 5'-3' RNA polymerase activity1.99E-02
124GO:0005509: calcium ion binding2.42E-02
125GO:0022891: substrate-specific transmembrane transporter activity2.58E-02
126GO:0030570: pectate lyase activity2.58E-02
127GO:0004812: aminoacyl-tRNA ligase activity2.90E-02
128GO:0008080: N-acetyltransferase activity3.23E-02
129GO:0016853: isomerase activity3.40E-02
130GO:0005355: glucose transmembrane transporter activity3.40E-02
131GO:0050662: coenzyme binding3.40E-02
132GO:0004872: receptor activity3.57E-02
133GO:0004518: nuclease activity3.93E-02
134GO:0030170: pyridoxal phosphate binding3.94E-02
135GO:0003924: GTPase activity4.09E-02
136GO:0003684: damaged DNA binding4.30E-02
137GO:0016791: phosphatase activity4.30E-02
138GO:0009055: electron carrier activity4.46E-02
139GO:0008483: transaminase activity4.49E-02
140GO:0005200: structural constituent of cytoskeleton4.49E-02
141GO:0016597: amino acid binding4.68E-02
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Gene type



Gene DE type