Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G45610

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0031222: arabinan catabolic process0.00E+00
2GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate0.00E+00
3GO:0090071: negative regulation of ribosome biogenesis0.00E+00
4GO:0035884: arabinan biosynthetic process0.00E+00
5GO:0045184: establishment of protein localization0.00E+00
6GO:0009606: tropism0.00E+00
7GO:1903224: regulation of endodermal cell differentiation0.00E+00
8GO:0006003: fructose 2,6-bisphosphate metabolic process0.00E+00
9GO:0006399: tRNA metabolic process0.00E+00
10GO:0046620: regulation of organ growth1.44E-07
11GO:0009734: auxin-activated signaling pathway1.30E-06
12GO:0009926: auxin polar transport2.20E-06
13GO:0042793: transcription from plastid promoter2.83E-06
14GO:0009658: chloroplast organization2.64E-05
15GO:0009451: RNA modification6.84E-05
16GO:0015904: tetracycline transport3.52E-04
17GO:0042659: regulation of cell fate specification3.52E-04
18GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process3.52E-04
19GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process3.52E-04
20GO:0090558: plant epidermis development3.52E-04
21GO:0042371: vitamin K biosynthetic process3.52E-04
22GO:0035987: endodermal cell differentiation3.52E-04
23GO:0043609: regulation of carbon utilization3.52E-04
24GO:0006436: tryptophanyl-tRNA aminoacylation3.52E-04
25GO:0000066: mitochondrial ornithine transport3.52E-04
26GO:0009733: response to auxin3.53E-04
27GO:0000105: histidine biosynthetic process3.84E-04
28GO:0007389: pattern specification process4.70E-04
29GO:0000373: Group II intron splicing5.65E-04
30GO:0010583: response to cyclopentenone5.74E-04
31GO:0009828: plant-type cell wall loosening6.73E-04
32GO:2000123: positive regulation of stomatal complex development7.67E-04
33GO:0006420: arginyl-tRNA aminoacylation7.67E-04
34GO:1902326: positive regulation of chlorophyll biosynthetic process7.67E-04
35GO:2000039: regulation of trichome morphogenesis7.67E-04
36GO:0018026: peptidyl-lysine monomethylation7.67E-04
37GO:0071497: cellular response to freezing7.67E-04
38GO:0042325: regulation of phosphorylation7.67E-04
39GO:1904143: positive regulation of carotenoid biosynthetic process7.67E-04
40GO:0080009: mRNA methylation7.67E-04
41GO:0090708: specification of plant organ axis polarity1.24E-03
42GO:0006000: fructose metabolic process1.24E-03
43GO:0001578: microtubule bundle formation1.24E-03
44GO:0006760: folic acid-containing compound metabolic process1.24E-03
45GO:1902476: chloride transmembrane transport1.79E-03
46GO:0010239: chloroplast mRNA processing1.79E-03
47GO:0010306: rhamnogalacturonan II biosynthetic process1.79E-03
48GO:0016556: mRNA modification1.79E-03
49GO:0046739: transport of virus in multicellular host1.79E-03
50GO:0051289: protein homotetramerization1.79E-03
51GO:0043572: plastid fission1.79E-03
52GO:2001141: regulation of RNA biosynthetic process1.79E-03
53GO:0009416: response to light stimulus2.07E-03
54GO:0051322: anaphase2.40E-03
55GO:0030104: water homeostasis2.40E-03
56GO:2000038: regulation of stomatal complex development2.40E-03
57GO:0046656: folic acid biosynthetic process2.40E-03
58GO:0006021: inositol biosynthetic process2.40E-03
59GO:0006346: methylation-dependent chromatin silencing2.40E-03
60GO:1901141: regulation of lignin biosynthetic process2.40E-03
61GO:0009831: plant-type cell wall modification involved in multidimensional cell growth2.60E-03
62GO:0009664: plant-type cell wall organization2.91E-03
63GO:0009107: lipoate biosynthetic process3.07E-03
64GO:0016123: xanthophyll biosynthetic process3.07E-03
65GO:0010375: stomatal complex patterning3.07E-03
66GO:0009904: chloroplast accumulation movement3.07E-03
67GO:0010236: plastoquinone biosynthetic process3.07E-03
68GO:0010315: auxin efflux3.79E-03
69GO:0018258: protein O-linked glycosylation via hydroxyproline3.79E-03
70GO:1902456: regulation of stomatal opening3.79E-03
71GO:0010405: arabinogalactan protein metabolic process3.79E-03
72GO:0007275: multicellular organism development4.31E-03
73GO:2000067: regulation of root morphogenesis4.57E-03
74GO:0042372: phylloquinone biosynthetic process4.57E-03
75GO:1901259: chloroplast rRNA processing4.57E-03
76GO:0017148: negative regulation of translation4.57E-03
77GO:0009942: longitudinal axis specification4.57E-03
78GO:0046654: tetrahydrofolate biosynthetic process4.57E-03
79GO:0009903: chloroplast avoidance movement4.57E-03
80GO:0030488: tRNA methylation4.57E-03
81GO:0010252: auxin homeostasis5.34E-03
82GO:0009772: photosynthetic electron transport in photosystem II5.40E-03
83GO:0006821: chloride transport5.40E-03
84GO:0015937: coenzyme A biosynthetic process5.40E-03
85GO:0030307: positive regulation of cell growth5.40E-03
86GO:0001522: pseudouridine synthesis6.27E-03
87GO:0048766: root hair initiation6.27E-03
88GO:0055075: potassium ion homeostasis6.27E-03
89GO:0006002: fructose 6-phosphate metabolic process7.19E-03
90GO:0071482: cellular response to light stimulus7.19E-03
91GO:0010497: plasmodesmata-mediated intercellular transport7.19E-03
92GO:0009657: plastid organization7.19E-03
93GO:0006526: arginine biosynthetic process7.19E-03
94GO:0010411: xyloglucan metabolic process7.51E-03
95GO:0009638: phototropism9.17E-03
96GO:1900865: chloroplast RNA modification9.17E-03
97GO:2000280: regulation of root development9.17E-03
98GO:0006499: N-terminal protein myristoylation9.19E-03
99GO:0040008: regulation of growth9.47E-03
100GO:0006949: syncytium formation1.02E-02
101GO:0006259: DNA metabolic process1.02E-02
102GO:0031627: telomeric loop formation1.02E-02
103GO:0006535: cysteine biosynthetic process from serine1.02E-02
104GO:0045036: protein targeting to chloroplast1.02E-02
105GO:0009637: response to blue light1.06E-02
106GO:0006265: DNA topological change1.13E-02
107GO:0006352: DNA-templated transcription, initiation1.13E-02
108GO:0006839: mitochondrial transport1.21E-02
109GO:0000266: mitochondrial fission1.25E-02
110GO:0006790: sulfur compound metabolic process1.25E-02
111GO:0045037: protein import into chloroplast stroma1.25E-02
112GO:2000012: regulation of auxin polar transport1.37E-02
113GO:0009785: blue light signaling pathway1.37E-02
114GO:0030048: actin filament-based movement1.37E-02
115GO:0009691: cytokinin biosynthetic process1.37E-02
116GO:0010114: response to red light1.37E-02
117GO:0042546: cell wall biogenesis1.42E-02
118GO:0010020: chloroplast fission1.49E-02
119GO:0046854: phosphatidylinositol phosphorylation1.61E-02
120GO:0009826: unidimensional cell growth1.67E-02
121GO:0006833: water transport1.74E-02
122GO:0019344: cysteine biosynthetic process1.88E-02
123GO:0000027: ribosomal large subunit assembly1.88E-02
124GO:0051302: regulation of cell division2.01E-02
125GO:0019953: sexual reproduction2.01E-02
126GO:0006418: tRNA aminoacylation for protein translation2.01E-02
127GO:0010073: meristem maintenance2.01E-02
128GO:0006306: DNA methylation2.15E-02
129GO:0016998: cell wall macromolecule catabolic process2.15E-02
130GO:0006730: one-carbon metabolic process2.29E-02
131GO:0010082: regulation of root meristem growth2.44E-02
132GO:0009742: brassinosteroid mediated signaling pathway2.79E-02
133GO:0010118: stomatal movement2.90E-02
134GO:0000226: microtubule cytoskeleton organization2.90E-02
135GO:0008033: tRNA processing2.90E-02
136GO:0009741: response to brassinosteroid3.06E-02
137GO:0009958: positive gravitropism3.06E-02
138GO:0006662: glycerol ether metabolic process3.06E-02
139GO:0048868: pollen tube development3.06E-02
140GO:0007059: chromosome segregation3.22E-02
141GO:0009646: response to absence of light3.22E-02
142GO:0048544: recognition of pollen3.22E-02
143GO:0006814: sodium ion transport3.22E-02
144GO:0009851: auxin biosynthetic process3.39E-02
145GO:0080156: mitochondrial mRNA modification3.55E-02
146GO:0071554: cell wall organization or biogenesis3.55E-02
147GO:0032502: developmental process3.72E-02
148GO:0009630: gravitropism3.72E-02
149GO:0031047: gene silencing by RNA3.72E-02
150GO:0019761: glucosinolate biosynthetic process3.72E-02
151GO:0009790: embryo development3.84E-02
152GO:1901657: glycosyl compound metabolic process3.90E-02
153GO:0009793: embryo development ending in seed dormancy4.06E-02
154GO:0006464: cellular protein modification process4.07E-02
155GO:0007267: cell-cell signaling4.25E-02
156GO:0000910: cytokinesis4.43E-02
157GO:0010027: thylakoid membrane organization4.62E-02
RankGO TermAdjusted P value
1GO:0070009: serine-type aminopeptidase activity0.00E+00
2GO:0052834: inositol monophosphate phosphatase activity0.00E+00
3GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity0.00E+00
4GO:0071633: dihydroceramidase activity0.00E+00
5GO:0004401: histidinol-phosphatase activity0.00E+00
6GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity0.00E+00
7GO:0003873: 6-phosphofructo-2-kinase activity0.00E+00
8GO:0004358: glutamate N-acetyltransferase activity0.00E+00
9GO:0004519: endonuclease activity3.07E-05
10GO:0004400: histidinol-phosphate transaminase activity3.52E-04
11GO:0005227: calcium activated cation channel activity3.52E-04
12GO:0004632: phosphopantothenate--cysteine ligase activity3.52E-04
13GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity3.52E-04
14GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity3.52E-04
15GO:0005290: L-histidine transmembrane transporter activity3.52E-04
16GO:0003867: 4-aminobutyrate transaminase activity3.52E-04
17GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity3.52E-04
18GO:0052381: tRNA dimethylallyltransferase activity3.52E-04
19GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity3.52E-04
20GO:0004830: tryptophan-tRNA ligase activity3.52E-04
21GO:0010347: L-galactose-1-phosphate phosphatase activity3.52E-04
22GO:0003723: RNA binding3.73E-04
23GO:0009672: auxin:proton symporter activity6.66E-04
24GO:0004326: tetrahydrofolylpolyglutamate synthase activity7.67E-04
25GO:0004814: arginine-tRNA ligase activity7.67E-04
26GO:0016415: octanoyltransferase activity7.67E-04
27GO:0102083: 7,8-dihydromonapterin aldolase activity7.67E-04
28GO:0052832: inositol monophosphate 3-phosphatase activity7.67E-04
29GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity7.67E-04
30GO:0008805: carbon-monoxide oxygenase activity7.67E-04
31GO:0008934: inositol monophosphate 1-phosphatase activity7.67E-04
32GO:0008493: tetracycline transporter activity7.67E-04
33GO:0052833: inositol monophosphate 4-phosphatase activity7.67E-04
34GO:0000064: L-ornithine transmembrane transporter activity7.67E-04
35GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity7.67E-04
36GO:0004150: dihydroneopterin aldolase activity7.67E-04
37GO:0017118: lipoyltransferase activity7.67E-04
38GO:0010329: auxin efflux transmembrane transporter activity1.16E-03
39GO:0016805: dipeptidase activity1.24E-03
40GO:0008508: bile acid:sodium symporter activity1.79E-03
41GO:0001872: (1->3)-beta-D-glucan binding1.79E-03
42GO:0015189: L-lysine transmembrane transporter activity1.79E-03
43GO:0015181: arginine transmembrane transporter activity1.79E-03
44GO:0043023: ribosomal large subunit binding1.79E-03
45GO:0001053: plastid sigma factor activity2.40E-03
46GO:0016987: sigma factor activity2.40E-03
47GO:0005253: anion channel activity2.40E-03
48GO:0046556: alpha-L-arabinofuranosidase activity2.40E-03
49GO:0004659: prenyltransferase activity2.40E-03
50GO:0016279: protein-lysine N-methyltransferase activity2.40E-03
51GO:0016773: phosphotransferase activity, alcohol group as acceptor3.07E-03
52GO:0070696: transmembrane receptor protein serine/threonine kinase binding3.07E-03
53GO:2001070: starch binding3.79E-03
54GO:1990714: hydroxyproline O-galactosyltransferase activity3.79E-03
55GO:0005247: voltage-gated chloride channel activity3.79E-03
56GO:0016762: xyloglucan:xyloglucosyl transferase activity4.40E-03
57GO:0004124: cysteine synthase activity4.57E-03
58GO:0008195: phosphatidate phosphatase activity4.57E-03
59GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity4.57E-03
60GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity7.19E-03
61GO:0016798: hydrolase activity, acting on glycosyl bonds7.51E-03
62GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.06E-02
63GO:0003993: acid phosphatase activity1.11E-02
64GO:0003691: double-stranded telomeric DNA binding1.13E-02
65GO:0019888: protein phosphatase regulator activity1.37E-02
66GO:0009982: pseudouridine synthase activity1.37E-02
67GO:0004022: alcohol dehydrogenase (NAD) activity1.37E-02
68GO:0031072: heat shock protein binding1.37E-02
69GO:0003774: motor activity1.49E-02
70GO:0102336: 3-oxo-arachidoyl-CoA synthase activity1.74E-02
71GO:0102337: 3-oxo-cerotoyl-CoA synthase activity1.74E-02
72GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity1.74E-02
73GO:0008408: 3'-5' exonuclease activity2.15E-02
74GO:0004707: MAP kinase activity2.15E-02
75GO:0003964: RNA-directed DNA polymerase activity2.15E-02
76GO:0004812: aminoacyl-tRNA ligase activity2.74E-02
77GO:0047134: protein-disulfide reductase activity2.74E-02
78GO:0005215: transporter activity2.88E-02
79GO:0008536: Ran GTPase binding3.06E-02
80GO:0004527: exonuclease activity3.06E-02
81GO:0004791: thioredoxin-disulfide reductase activity3.22E-02
82GO:0019843: rRNA binding3.29E-02
83GO:0019901: protein kinase binding3.39E-02
84GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds3.63E-02
85GO:0004518: nuclease activity3.72E-02
86GO:0000156: phosphorelay response regulator activity3.90E-02
87GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor3.90E-02
88GO:0008237: metallopeptidase activity4.25E-02
89GO:0016413: O-acetyltransferase activity4.43E-02
90GO:0051213: dioxygenase activity4.62E-02
91GO:0008017: microtubule binding4.74E-02
92GO:0005525: GTP binding4.98E-02
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Gene type



Gene DE type