co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G44600

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0000488: maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	0.00E+00
2	GO:0006399: tRNA metabolic process	0.00E+00
3	GO:0070125: mitochondrial translational elongation	0.00E+00
4	GO:0010028: xanthophyll cycle	0.00E+00
5	GO:0097275: cellular ammonia homeostasis	0.00E+00
6	GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate	0.00E+00
7	GO:0051924: regulation of calcium ion transport	0.00E+00
8	GO:0000489: maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	0.00E+00
9	GO:0042407: cristae formation	0.00E+00
10	GO:0000455: enzyme-directed rRNA pseudouridine synthesis	0.00E+00
11	GO:0046460: neutral lipid biosynthetic process	0.00E+00
12	GO:0019379: sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)	0.00E+00
13	GO:0015805: S-adenosyl-L-methionine transport	0.00E+00
14	GO:0015882: L-ascorbic acid transport	0.00E+00
15	GO:0018023: peptidyl-lysine trimethylation	0.00E+00
16	GO:0042817: pyridoxal metabolic process	0.00E+00
17	GO:0009658: chloroplast organization	1.05E-04
18	GO:0042372: phylloquinone biosynthetic process	1.83E-04
19	GO:0006659: phosphatidylserine biosynthetic process	2.99E-04
20	GO:0042371: vitamin K biosynthetic process	2.99E-04
21	GO:0043087: regulation of GTPase activity	2.99E-04
22	GO:2000021: regulation of ion homeostasis	2.99E-04
23	GO:1902458: positive regulation of stomatal opening	2.99E-04
24	GO:0006419: alanyl-tRNA aminoacylation	2.99E-04
25	GO:0051171: regulation of nitrogen compound metabolic process	2.99E-04
26	GO:0010493: Lewis a epitope biosynthetic process	2.99E-04
27	GO:0043266: regulation of potassium ion transport	2.99E-04
28	GO:0032544: plastid translation	3.71E-04
29	GO:0045036: protein targeting to chloroplast	6.16E-04
30	GO:0042325: regulation of phosphorylation	6.55E-04
31	GO:0042550: photosystem I stabilization	6.55E-04
32	GO:0016122: xanthophyll metabolic process	6.55E-04
33	GO:1903426: regulation of reactive oxygen species biosynthetic process	6.55E-04
34	GO:0006568: tryptophan metabolic process	6.55E-04
35	GO:0015804: neutral amino acid transport	6.55E-04
36	GO:0006739: NADP metabolic process	6.55E-04
37	GO:0006423: cysteinyl-tRNA aminoacylation	6.55E-04
38	GO:0018026: peptidyl-lysine monomethylation	6.55E-04
39	GO:0000256: allantoin catabolic process	6.55E-04
40	GO:0009684: indoleacetic acid biosynthetic process	7.11E-04
41	GO:0045037: protein import into chloroplast stroma	8.12E-04
42	GO:0033591: response to L-ascorbic acid	1.06E-03
43	GO:0019419: sulfate reduction	1.06E-03
44	GO:0010136: ureide catabolic process	1.06E-03
45	GO:0080055: low-affinity nitrate transport	1.06E-03
46	GO:0051604: protein maturation	1.06E-03
47	GO:0019344: cysteine biosynthetic process	1.42E-03
48	GO:2001141: regulation of RNA biosynthetic process	1.52E-03
49	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	1.52E-03
50	GO:0051639: actin filament network formation	1.52E-03
51	GO:0006145: purine nucleobase catabolic process	1.52E-03
52	GO:0008615: pyridoxine biosynthetic process	1.52E-03
53	GO:0010255: glucose mediated signaling pathway	1.52E-03
54	GO:0051764: actin crosslink formation	2.04E-03
55	GO:0015994: chlorophyll metabolic process	2.04E-03
56	GO:0006021: inositol biosynthetic process	2.04E-03
57	GO:0006734: NADH metabolic process	2.04E-03
58	GO:0045038: protein import into chloroplast thylakoid membrane	2.61E-03
59	GO:0010236: plastoquinone biosynthetic process	2.61E-03
60	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	3.22E-03
61	GO:0016554: cytidine to uridine editing	3.22E-03
62	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	3.22E-03
63	GO:0080086: stamen filament development	3.87E-03
64	GO:0042026: protein refolding	3.87E-03
65	GO:0034389: lipid particle organization	3.87E-03
66	GO:0006458: 'de novo' protein folding	3.87E-03
67	GO:1901657: glycosyl compound metabolic process	3.94E-03
68	GO:0015693: magnesium ion transport	4.57E-03
69	GO:0009772: photosynthetic electron transport in photosystem II	4.57E-03
70	GO:0006400: tRNA modification	4.57E-03
71	GO:0010027: thylakoid membrane organization	5.00E-03
72	GO:2000070: regulation of response to water deprivation	5.30E-03
73	GO:0009787: regulation of abscisic acid-activated signaling pathway	5.30E-03
74	GO:0006402: mRNA catabolic process	5.30E-03
75	GO:0046620: regulation of organ growth	5.30E-03
76	GO:0019375: galactolipid biosynthetic process	5.30E-03
77	GO:0010078: maintenance of root meristem identity	5.30E-03
78	GO:0043562: cellular response to nitrogen levels	6.08E-03
79	GO:0006002: fructose 6-phosphate metabolic process	6.08E-03
80	GO:0071482: cellular response to light stimulus	6.08E-03
81	GO:0006633: fatty acid biosynthetic process	6.54E-03
82	GO:0000373: Group II intron splicing	6.89E-03
83	GO:0015780: nucleotide-sugar transport	6.89E-03
84	GO:0098656: anion transmembrane transport	6.89E-03
85	GO:0019432: triglyceride biosynthetic process	6.89E-03
86	GO:0006783: heme biosynthetic process	6.89E-03
87	GO:0009638: phototropism	7.74E-03
88	GO:0043067: regulation of programmed cell death	7.74E-03
89	GO:1900865: chloroplast RNA modification	7.74E-03
90	GO:0010380: regulation of chlorophyll biosynthetic process	7.74E-03
91	GO:0031425: chloroplast RNA processing	7.74E-03
92	GO:0006865: amino acid transport	7.91E-03
93	GO:0006782: protoporphyrinogen IX biosynthetic process	8.62E-03
94	GO:0006535: cysteine biosynthetic process from serine	8.62E-03
95	GO:0000103: sulfate assimilation	8.62E-03
96	GO:0006839: mitochondrial transport	9.45E-03
97	GO:0018119: peptidyl-cysteine S-nitrosylation	9.55E-03
98	GO:0006415: translational termination	9.55E-03
99	GO:1903507: negative regulation of nucleic acid-templated transcription	9.55E-03
100	GO:0006352: DNA-templated transcription, initiation	9.55E-03
101	GO:0006631: fatty acid metabolic process	9.85E-03
102	GO:0010588: cotyledon vascular tissue pattern formation	1.15E-02
103	GO:2000012: regulation of auxin polar transport	1.15E-02
104	GO:0006108: malate metabolic process	1.15E-02
105	GO:0048467: gynoecium development	1.25E-02
106	GO:0019853: L-ascorbic acid biosynthetic process	1.36E-02
107	GO:0009585: red, far-red light phototransduction	1.45E-02
108	GO:0009833: plant-type primary cell wall biogenesis	1.47E-02
109	GO:0006071: glycerol metabolic process	1.47E-02
110	GO:0080147: root hair cell development	1.58E-02
111	GO:0010187: negative regulation of seed germination	1.58E-02
112	GO:0051017: actin filament bundle assembly	1.58E-02
113	GO:0009416: response to light stimulus	1.68E-02
114	GO:0061077: chaperone-mediated protein folding	1.81E-02
115	GO:0031408: oxylipin biosynthetic process	1.81E-02
116	GO:0003333: amino acid transmembrane transport	1.81E-02
117	GO:0007005: mitochondrion organization	1.93E-02
118	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.93E-02
119	GO:0006730: one-carbon metabolic process	1.93E-02
120	GO:0009733: response to auxin	1.96E-02
121	GO:0006012: galactose metabolic process	2.05E-02
122	GO:0010214: seed coat development	2.18E-02
123	GO:0009306: protein secretion	2.18E-02
124	GO:0010087: phloem or xylem histogenesis	2.44E-02
125	GO:0080022: primary root development	2.44E-02
126	GO:0010197: polar nucleus fusion	2.57E-02
127	GO:0009958: positive gravitropism	2.57E-02
128	GO:0009793: embryo development ending in seed dormancy	2.59E-02
129	GO:0008654: phospholipid biosynthetic process	2.85E-02
130	GO:0009851: auxin biosynthetic process	2.85E-02
131	GO:0009791: post-embryonic development	2.85E-02
132	GO:0048825: cotyledon development	2.85E-02
133	GO:0000302: response to reactive oxygen species	2.99E-02
134	GO:0016032: viral process	3.13E-02
135	GO:0005975: carbohydrate metabolic process	3.25E-02
136	GO:0006413: translational initiation	3.32E-02
137	GO:0040008: regulation of growth	3.40E-02
138	GO:0009911: positive regulation of flower development	3.88E-02
139	GO:0007166: cell surface receptor signaling pathway	4.07E-02
140	GO:0009627: systemic acquired resistance	4.20E-02
141	GO:0010468: regulation of gene expression	4.24E-02
142	GO:0015995: chlorophyll biosynthetic process	4.36E-02
143	GO:0030244: cellulose biosynthetic process	4.69E-02
144	GO:0009832: plant-type cell wall biogenesis	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0004740: pyruvate dehydrogenase (acetyl-transferring) kinase activity	0.00E+00
2	GO:0010349: L-galactose dehydrogenase activity	0.00E+00
3	GO:0046422: violaxanthin de-epoxidase activity	0.00E+00
4	GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity	0.00E+00
5	GO:0043864: indoleacetamide hydrolase activity	0.00E+00
6	GO:0033818: beta-ketoacyl-acyl-carrier-protein synthase III activity	0.00E+00
7	GO:0015229: L-ascorbic acid transporter activity	0.00E+00
8	GO:0008756: o-succinylbenzoate-CoA ligase activity	0.00E+00
9	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	2.99E-04
10	GO:0052857: NADPHX epimerase activity	2.99E-04
11	GO:0050139: nicotinate-N-glucosyltransferase activity	2.99E-04
12	GO:0046480: galactolipid galactosyltransferase activity	2.99E-04
13	GO:0004425: indole-3-glycerol-phosphate synthase activity	2.99E-04
14	GO:0004733: pyridoxamine-phosphate oxidase activity	2.99E-04
15	GO:0046920: alpha-(1->3)-fucosyltransferase activity	2.99E-04
16	GO:0004813: alanine-tRNA ligase activity	2.99E-04
17	GO:0004853: uroporphyrinogen decarboxylase activity	2.99E-04
18	GO:0052856: NADHX epimerase activity	2.99E-04
19	GO:0046481: digalactosyldiacylglycerol synthase activity	2.99E-04
20	GO:0015172: acidic amino acid transmembrane transporter activity	6.55E-04
21	GO:0050017: L-3-cyanoalanine synthase activity	6.55E-04
22	GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity	6.55E-04
23	GO:0009977: proton motive force dependent protein transmembrane transporter activity	6.55E-04
24	GO:0033741: adenylyl-sulfate reductase (glutathione) activity	6.55E-04
25	GO:0004817: cysteine-tRNA ligase activity	6.55E-04
26	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	6.55E-04
27	GO:0009973: adenylyl-sulfate reductase activity	6.55E-04
28	GO:0080097: L-tryptophan:pyruvate aminotransferase activity	6.55E-04
29	GO:0004604: phosphoadenylyl-sulfate reductase (thioredoxin) activity	6.55E-04
30	GO:0004512: inositol-3-phosphate synthase activity	6.55E-04
31	GO:0005525: GTP binding	1.01E-03
32	GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity	1.06E-03
33	GO:0052692: raffinose alpha-galactosidase activity	1.06E-03
34	GO:0080054: low-affinity nitrate transmembrane transporter activity	1.06E-03
35	GO:0046524: sucrose-phosphate synthase activity	1.06E-03
36	GO:0004848: ureidoglycolate hydrolase activity	1.06E-03
37	GO:0004148: dihydrolipoyl dehydrogenase activity	1.06E-03
38	GO:0004557: alpha-galactosidase activity	1.06E-03
39	GO:0015175: neutral amino acid transmembrane transporter activity	1.52E-03
40	GO:0035250: UDP-galactosyltransferase activity	1.52E-03
41	GO:0016149: translation release factor activity, codon specific	1.52E-03
42	GO:0016851: magnesium chelatase activity	1.52E-03
43	GO:0004659: prenyltransferase activity	2.04E-03
44	GO:0016279: protein-lysine N-methyltransferase activity	2.04E-03
45	GO:0001053: plastid sigma factor activity	2.04E-03
46	GO:0016987: sigma factor activity	2.04E-03
47	GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	2.04E-03
48	GO:0010294: abscisic acid glucosyltransferase activity	2.61E-03
49	GO:0016846: carbon-sulfur lyase activity	2.61E-03
50	GO:0004040: amidase activity	2.61E-03
51	GO:0016208: AMP binding	3.22E-03
52	GO:0042578: phosphoric ester hydrolase activity	3.22E-03
53	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	3.87E-03
54	GO:0004124: cysteine synthase activity	3.87E-03
55	GO:0008195: phosphatidate phosphatase activity	3.87E-03
56	GO:0016832: aldehyde-lyase activity	3.87E-03
57	GO:0030060: L-malate dehydrogenase activity	3.87E-03
58	GO:0009927: histidine phosphotransfer kinase activity	3.87E-03
59	GO:0004144: diacylglycerol O-acyltransferase activity	3.87E-03
60	GO:0008237: metallopeptidase activity	4.45E-03
61	GO:0005338: nucleotide-sugar transmembrane transporter activity	4.57E-03
62	GO:0003872: 6-phosphofructokinase activity	4.57E-03
63	GO:0004033: aldo-keto reductase (NADP) activity	5.30E-03
64	GO:0043022: ribosome binding	5.30E-03
65	GO:0042803: protein homodimerization activity	5.52E-03
66	GO:0102483: scopolin beta-glucosidase activity	5.89E-03
67	GO:0003747: translation release factor activity	6.89E-03
68	GO:0008417: fucosyltransferase activity	6.89E-03
69	GO:0003746: translation elongation factor activity	8.28E-03
70	GO:0004713: protein tyrosine kinase activity	8.62E-03
71	GO:0008422: beta-glucosidase activity	9.05E-03
72	GO:0044183: protein binding involved in protein folding	9.55E-03
73	GO:0047372: acylglycerol lipase activity	9.55E-03
74	GO:0000049: tRNA binding	1.05E-02
75	GO:0005315: inorganic phosphate transmembrane transporter activity	1.15E-02
76	GO:0004089: carbonate dehydratase activity	1.15E-02
77	GO:0015095: magnesium ion transmembrane transporter activity	1.15E-02
78	GO:0019888: protein phosphatase regulator activity	1.15E-02
79	GO:0009982: pseudouridine synthase activity	1.15E-02
80	GO:0008266: poly(U) RNA binding	1.25E-02
81	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.47E-02
82	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.47E-02
83	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.47E-02
84	GO:0003714: transcription corepressor activity	1.58E-02
85	GO:0015171: amino acid transmembrane transporter activity	1.60E-02
86	GO:0051087: chaperone binding	1.69E-02
87	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.81E-02
88	GO:0004176: ATP-dependent peptidase activity	1.81E-02
89	GO:0003964: RNA-directed DNA polymerase activity	1.81E-02
90	GO:0080043: quercetin 3-O-glucosyltransferase activity	1.88E-02
91	GO:0080044: quercetin 7-O-glucosyltransferase activity	1.88E-02
92	GO:0022857: transmembrane transporter activity	1.94E-02
93	GO:0016760: cellulose synthase (UDP-forming) activity	2.05E-02
94	GO:0008514: organic anion transmembrane transporter activity	2.18E-02
95	GO:0008536: Ran GTPase binding	2.57E-02
96	GO:0001085: RNA polymerase II transcription factor binding	2.57E-02
97	GO:0010181: FMN binding	2.71E-02
98	GO:0003924: GTPase activity	2.76E-02
99	GO:0008565: protein transporter activity	3.09E-02
100	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	3.28E-02
101	GO:0051015: actin filament binding	3.28E-02
102	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.32E-02
103	GO:0015297: antiporter activity	3.40E-02
104	GO:0016759: cellulose synthase activity	3.42E-02
105	GO:0016597: amino acid binding	3.73E-02
106	GO:0008194: UDP-glycosyltransferase activity	3.98E-02
107	GO:0003743: translation initiation factor activity	4.15E-02
108	GO:0042802: identical protein binding	4.51E-02
109	GO:0008236: serine-type peptidase activity	4.52E-02
110	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	4.69E-02
111	GO:0005096: GTPase activator activity	4.85E-02
112	GO:0015238: drug transmembrane transporter activity	4.85E-02