Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G44410

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006399: tRNA metabolic process0.00E+00
2GO:0070125: mitochondrial translational elongation0.00E+00
3GO:0009249: protein lipoylation0.00E+00
4GO:2000505: regulation of energy homeostasis0.00E+00
5GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate0.00E+00
6GO:0017038: protein import0.00E+00
7GO:0090071: negative regulation of ribosome biogenesis0.00E+00
8GO:0046460: neutral lipid biosynthetic process0.00E+00
9GO:0046838: phosphorylated carbohydrate dephosphorylation0.00E+00
10GO:0031116: positive regulation of microtubule polymerization0.00E+00
11GO:0042407: cristae formation0.00E+00
12GO:0042821: pyridoxal biosynthetic process0.00E+00
13GO:0042820: vitamin B6 catabolic process0.00E+00
14GO:0009106: lipoate metabolic process0.00E+00
15GO:0090042: tubulin deacetylation0.00E+00
16GO:0015882: L-ascorbic acid transport0.00E+00
17GO:0042817: pyridoxal metabolic process0.00E+00
18GO:0018023: peptidyl-lysine trimethylation0.00E+00
19GO:0009658: chloroplast organization1.06E-04
20GO:0045038: protein import into chloroplast thylakoid membrane2.04E-04
21GO:0010190: cytochrome b6f complex assembly2.88E-04
22GO:2000021: regulation of ion homeostasis4.87E-04
23GO:1902458: positive regulation of stomatal opening4.87E-04
24GO:0010028: xanthophyll cycle4.87E-04
25GO:0048363: mucilage pectin metabolic process4.87E-04
26GO:0000023: maltose metabolic process4.87E-04
27GO:0006419: alanyl-tRNA aminoacylation4.87E-04
28GO:0000476: maturation of 4.5S rRNA4.87E-04
29GO:0009443: pyridoxal 5'-phosphate salvage4.87E-04
30GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process4.87E-04
31GO:0000967: rRNA 5'-end processing4.87E-04
32GO:0015671: oxygen transport4.87E-04
33GO:0043266: regulation of potassium ion transport4.87E-04
34GO:0042547: cell wall modification involved in multidimensional cell growth4.87E-04
35GO:0042371: vitamin K biosynthetic process4.87E-04
36GO:0006400: tRNA modification4.95E-04
37GO:0006605: protein targeting6.17E-04
38GO:0071482: cellular response to light stimulus7.51E-04
39GO:0010206: photosystem II repair8.99E-04
40GO:0019432: triglyceride biosynthetic process8.99E-04
41GO:0001682: tRNA 5'-leader removal1.05E-03
42GO:1903426: regulation of reactive oxygen species biosynthetic process1.05E-03
43GO:0034470: ncRNA processing1.05E-03
44GO:0010198: synergid death1.05E-03
45GO:0006739: NADP metabolic process1.05E-03
46GO:0009629: response to gravity1.05E-03
47GO:1900871: chloroplast mRNA modification1.05E-03
48GO:0007154: cell communication1.05E-03
49GO:0018026: peptidyl-lysine monomethylation1.05E-03
50GO:0006423: cysteinyl-tRNA aminoacylation1.05E-03
51GO:0006435: threonyl-tRNA aminoacylation1.05E-03
52GO:0071668: plant-type cell wall assembly1.05E-03
53GO:0009220: pyrimidine ribonucleotide biosynthetic process1.05E-03
54GO:0045036: protein targeting to chloroplast1.23E-03
55GO:0006782: protoporphyrinogen IX biosynthetic process1.23E-03
56GO:0009793: embryo development ending in seed dormancy1.30E-03
57GO:0006352: DNA-templated transcription, initiation1.42E-03
58GO:0010027: thylakoid membrane organization1.54E-03
59GO:0005983: starch catabolic process1.63E-03
60GO:0045037: protein import into chloroplast stroma1.63E-03
61GO:0006760: folic acid-containing compound metabolic process1.71E-03
62GO:0090506: axillary shoot meristem initiation1.71E-03
63GO:0033591: response to L-ascorbic acid1.71E-03
64GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition1.71E-03
65GO:0051604: protein maturation1.71E-03
66GO:0015940: pantothenate biosynthetic process1.71E-03
67GO:0001578: microtubule bundle formation1.71E-03
68GO:0045493: xylan catabolic process1.71E-03
69GO:0009627: systemic acquired resistance1.77E-03
70GO:2000012: regulation of auxin polar transport1.85E-03
71GO:0015995: chlorophyll biosynthetic process1.89E-03
72GO:0090351: seedling development2.34E-03
73GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly2.48E-03
74GO:0009102: biotin biosynthetic process2.48E-03
75GO:0046653: tetrahydrofolate metabolic process2.48E-03
76GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity2.48E-03
77GO:0008615: pyridoxine biosynthetic process2.48E-03
78GO:0016556: mRNA modification2.48E-03
79GO:2001141: regulation of RNA biosynthetic process2.48E-03
80GO:0010109: regulation of photosynthesis3.34E-03
81GO:0051322: anaphase3.34E-03
82GO:0022622: root system development3.34E-03
83GO:0046656: folic acid biosynthetic process3.34E-03
84GO:0007020: microtubule nucleation3.34E-03
85GO:0071483: cellular response to blue light3.34E-03
86GO:0006734: NADH metabolic process3.34E-03
87GO:0044205: 'de novo' UMP biosynthetic process3.34E-03
88GO:0061077: chaperone-mediated protein folding3.52E-03
89GO:0009733: response to auxin3.65E-03
90GO:0006730: one-carbon metabolic process3.86E-03
91GO:0040008: regulation of growth4.10E-03
92GO:0009107: lipoate biosynthetic process4.28E-03
93GO:0016123: xanthophyll biosynthetic process4.28E-03
94GO:0046785: microtubule polymerization4.28E-03
95GO:0010236: plastoquinone biosynthetic process4.28E-03
96GO:0009306: protein secretion4.58E-03
97GO:0042793: transcription from plastid promoter5.30E-03
98GO:0016554: cytidine to uridine editing5.30E-03
99GO:0032973: amino acid export5.30E-03
100GO:0080086: stamen filament development6.40E-03
101GO:0009648: photoperiodism6.40E-03
102GO:0042372: phylloquinone biosynthetic process6.40E-03
103GO:0010067: procambium histogenesis6.40E-03
104GO:0042026: protein refolding6.40E-03
105GO:0006458: 'de novo' protein folding6.40E-03
106GO:0034389: lipid particle organization6.40E-03
107GO:0017148: negative regulation of translation6.40E-03
108GO:0046654: tetrahydrofolate biosynthetic process6.40E-03
109GO:0030488: tRNA methylation6.40E-03
110GO:0005975: carbohydrate metabolic process7.43E-03
111GO:0032880: regulation of protein localization7.57E-03
112GO:0048528: post-embryonic root development7.57E-03
113GO:0009772: photosynthetic electron transport in photosystem II7.57E-03
114GO:0043090: amino acid import7.57E-03
115GO:0006614: SRP-dependent cotranslational protein targeting to membrane7.57E-03
116GO:0010196: nonphotochemical quenching7.57E-03
117GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process7.57E-03
118GO:1901657: glycosyl compound metabolic process8.17E-03
119GO:0000105: histidine biosynthetic process8.81E-03
120GO:0046620: regulation of organ growth8.81E-03
121GO:0006353: DNA-templated transcription, termination8.81E-03
122GO:0070413: trehalose metabolism in response to stress8.81E-03
123GO:0006875: cellular metal ion homeostasis8.81E-03
124GO:2000070: regulation of response to water deprivation8.81E-03
125GO:0009932: cell tip growth1.01E-02
126GO:0022900: electron transport chain1.01E-02
127GO:0009657: plastid organization1.01E-02
128GO:0006526: arginine biosynthetic process1.01E-02
129GO:0032544: plastid translation1.01E-02
130GO:0015780: nucleotide-sugar transport1.15E-02
131GO:0098656: anion transmembrane transport1.15E-02
132GO:0080144: amino acid homeostasis1.15E-02
133GO:0006783: heme biosynthetic process1.15E-02
134GO:0043067: regulation of programmed cell death1.29E-02
135GO:0006779: porphyrin-containing compound biosynthetic process1.29E-02
136GO:0042761: very long-chain fatty acid biosynthetic process1.29E-02
137GO:1900865: chloroplast RNA modification1.29E-02
138GO:0048354: mucilage biosynthetic process involved in seed coat development1.29E-02
139GO:0006949: syncytium formation1.45E-02
140GO:0009684: indoleacetic acid biosynthetic process1.60E-02
141GO:0010015: root morphogenesis1.60E-02
142GO:0019684: photosynthesis, light reaction1.60E-02
143GO:0009089: lysine biosynthetic process via diaminopimelate1.60E-02
144GO:0009773: photosynthetic electron transport in photosystem I1.60E-02
145GO:1903507: negative regulation of nucleic acid-templated transcription1.60E-02
146GO:0006415: translational termination1.60E-02
147GO:0018119: peptidyl-cysteine S-nitrosylation1.60E-02
148GO:0045087: innate immune response1.73E-02
149GO:0009725: response to hormone1.93E-02
150GO:0006631: fatty acid metabolic process2.06E-02
151GO:0010207: photosystem II assembly2.11E-02
152GO:0010020: chloroplast fission2.11E-02
153GO:0010114: response to red light2.23E-02
154GO:0071732: cellular response to nitric oxide2.28E-02
155GO:0006071: glycerol metabolic process2.47E-02
156GO:0000162: tryptophan biosynthetic process2.47E-02
157GO:0010025: wax biosynthetic process2.47E-02
158GO:0005992: trehalose biosynthetic process2.66E-02
159GO:0009116: nucleoside metabolic process2.66E-02
160GO:0016575: histone deacetylation2.85E-02
161GO:0043622: cortical microtubule organization2.85E-02
162GO:0048511: rhythmic process3.05E-02
163GO:0031348: negative regulation of defense response3.25E-02
164GO:0009814: defense response, incompatible interaction3.25E-02
165GO:2000022: regulation of jasmonic acid mediated signaling pathway3.25E-02
166GO:0007005: mitochondrion organization3.25E-02
167GO:0009831: plant-type cell wall modification involved in multidimensional cell growth3.46E-02
168GO:0071369: cellular response to ethylene stimulus3.46E-02
169GO:0009734: auxin-activated signaling pathway3.53E-02
170GO:0010089: xylem development3.67E-02
171GO:0009409: response to cold3.73E-02
172GO:0016117: carotenoid biosynthetic process3.89E-02
173GO:0009789: positive regulation of abscisic acid-activated signaling pathway3.89E-02
174GO:0008284: positive regulation of cell proliferation3.89E-02
175GO:0010087: phloem or xylem histogenesis4.11E-02
176GO:0000271: polysaccharide biosynthetic process4.11E-02
177GO:0008033: tRNA processing4.11E-02
178GO:0009958: positive gravitropism4.33E-02
179GO:0045489: pectin biosynthetic process4.33E-02
180GO:0010197: polar nucleus fusion4.33E-02
181GO:0042752: regulation of circadian rhythm4.56E-02
182GO:0009646: response to absence of light4.56E-02
183GO:0015979: photosynthesis4.95E-02
RankGO TermAdjusted P value
1GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity0.00E+00
2GO:0004358: glutamate N-acetyltransferase activity0.00E+00
3GO:0033819: lipoyl(octanoyl) transferase activity0.00E+00
4GO:0005048: signal sequence binding0.00E+00
5GO:0004076: biotin synthase activity0.00E+00
6GO:0061634: alpha-D-xyloside xylohydrolase0.00E+00
7GO:0005363: maltose transmembrane transporter activity0.00E+00
8GO:0043864: indoleacetamide hydrolase activity0.00E+00
9GO:0050236: pyridoxine:NADP 4-dehydrogenase activity0.00E+00
10GO:0004588: orotate phosphoribosyltransferase activity0.00E+00
11GO:0008115: sarcosine oxidase activity0.00E+00
12GO:0004590: orotidine-5'-phosphate decarboxylase activity0.00E+00
13GO:0050613: delta14-sterol reductase activity0.00E+00
14GO:0051721: protein phosphatase 2A binding0.00E+00
15GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity0.00E+00
16GO:0042903: tubulin deacetylase activity0.00E+00
17GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity0.00E+00
18GO:0043014: alpha-tubulin binding0.00E+00
19GO:0080176: xyloglucan 1,6-alpha-xylosidase activity0.00E+00
20GO:0015229: L-ascorbic acid transporter activity0.00E+00
21GO:0004326: tetrahydrofolylpolyglutamate synthase activity1.04E-05
22GO:0016851: magnesium chelatase activity7.62E-05
23GO:0001053: plastid sigma factor activity1.32E-04
24GO:0016987: sigma factor activity1.32E-04
25GO:0004040: amidase activity2.04E-04
26GO:0005528: FK506 binding3.00E-04
27GO:0004017: adenylate kinase activity3.85E-04
28GO:0016784: 3-mercaptopyruvate sulfurtransferase activity4.87E-04
29GO:0005344: oxygen transporter activity4.87E-04
30GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity4.87E-04
31GO:0004733: pyridoxamine-phosphate oxidase activity4.87E-04
32GO:0003864: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity4.87E-04
33GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity4.87E-04
34GO:0004856: xylulokinase activity4.87E-04
35GO:0009496: plastoquinol--plastocyanin reductase activity4.87E-04
36GO:0050308: sugar-phosphatase activity4.87E-04
37GO:0004813: alanine-tRNA ligase activity4.87E-04
38GO:0019203: carbohydrate phosphatase activity4.87E-04
39GO:0004853: uroporphyrinogen decarboxylase activity4.87E-04
40GO:0052856: NADHX epimerase activity4.87E-04
41GO:0015088: copper uptake transmembrane transporter activity4.87E-04
42GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity4.87E-04
43GO:0052857: NADPHX epimerase activity4.87E-04
44GO:0003755: peptidyl-prolyl cis-trans isomerase activity8.94E-04
45GO:0009977: proton motive force dependent protein transmembrane transporter activity1.05E-03
46GO:0016415: octanoyltransferase activity1.05E-03
47GO:0102083: 7,8-dihydromonapterin aldolase activity1.05E-03
48GO:0004817: cysteine-tRNA ligase activity1.05E-03
49GO:0004829: threonine-tRNA ligase activity1.05E-03
50GO:0004150: dihydroneopterin aldolase activity1.05E-03
51GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase1.05E-03
52GO:0010291: carotene beta-ring hydroxylase activity1.05E-03
53GO:0017118: lipoyltransferase activity1.05E-03
54GO:0005525: GTP binding1.68E-03
55GO:0070402: NADPH binding1.71E-03
56GO:0052692: raffinose alpha-galactosidase activity1.71E-03
57GO:0015462: ATPase-coupled protein transmembrane transporter activity1.71E-03
58GO:0046524: sucrose-phosphate synthase activity1.71E-03
59GO:0003913: DNA photolyase activity1.71E-03
60GO:0004557: alpha-galactosidase activity1.71E-03
61GO:0008236: serine-type peptidase activity2.02E-03
62GO:0043023: ribosomal large subunit binding2.48E-03
63GO:0019201: nucleotide kinase activity2.48E-03
64GO:0048487: beta-tubulin binding2.48E-03
65GO:0004792: thiosulfate sulfurtransferase activity2.48E-03
66GO:0016149: translation release factor activity, codon specific2.48E-03
67GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor2.48E-03
68GO:0016656: monodehydroascorbate reductase (NADH) activity2.48E-03
69GO:0004659: prenyltransferase activity3.34E-03
70GO:0016279: protein-lysine N-methyltransferase activity3.34E-03
71GO:0004045: aminoacyl-tRNA hydrolase activity3.34E-03
72GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds3.34E-03
73GO:0009044: xylan 1,4-beta-xylosidase activity3.34E-03
74GO:0046556: alpha-L-arabinofuranosidase activity3.34E-03
75GO:0004176: ATP-dependent peptidase activity3.52E-03
76GO:0045300: acyl-[acyl-carrier-protein] desaturase activity4.28E-03
77GO:0016773: phosphotransferase activity, alcohol group as acceptor4.28E-03
78GO:2001070: starch binding5.30E-03
79GO:0080030: methyl indole-3-acetate esterase activity5.30E-03
80GO:0004526: ribonuclease P activity5.30E-03
81GO:0042578: phosphoric ester hydrolase activity5.30E-03
82GO:0003924: GTPase activity6.23E-03
83GO:0016832: aldehyde-lyase activity6.40E-03
84GO:0004144: diacylglycerol O-acyltransferase activity6.40E-03
85GO:0004723: calcium-dependent protein serine/threonine phosphatase activity6.40E-03
86GO:0005338: nucleotide-sugar transmembrane transporter activity7.57E-03
87GO:0009881: photoreceptor activity7.57E-03
88GO:0008312: 7S RNA binding8.81E-03
89GO:0043022: ribosome binding8.81E-03
90GO:0016788: hydrolase activity, acting on ester bonds8.81E-03
91GO:0004033: aldo-keto reductase (NADP) activity8.81E-03
92GO:0008237: metallopeptidase activity9.24E-03
93GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)1.01E-02
94GO:0003747: translation release factor activity1.15E-02
95GO:0008138: protein tyrosine/serine/threonine phosphatase activity1.15E-02
96GO:0102483: scopolin beta-glucosidase activity1.23E-02
97GO:0005381: iron ion transmembrane transporter activity1.29E-02
98GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity1.36E-02
99GO:0052689: carboxylic ester hydrolase activity1.38E-02
100GO:0004252: serine-type endopeptidase activity1.42E-02
101GO:0004805: trehalose-phosphatase activity1.45E-02
102GO:0008559: xenobiotic-transporting ATPase activity1.60E-02
103GO:0044183: protein binding involved in protein folding1.60E-02
104GO:0003746: translation elongation factor activity1.73E-02
105GO:0000049: tRNA binding1.76E-02
106GO:0008422: beta-glucosidase activity1.89E-02
107GO:0004022: alcohol dehydrogenase (NAD) activity1.93E-02
108GO:0005315: inorganic phosphate transmembrane transporter activity1.93E-02
109GO:0051539: 4 iron, 4 sulfur cluster binding1.97E-02
110GO:0008083: growth factor activity2.11E-02
111GO:0042973: glucan endo-1,3-beta-D-glucosidase activity2.11E-02
112GO:0008266: poly(U) RNA binding2.11E-02
113GO:0051537: 2 iron, 2 sulfur cluster binding2.42E-02
114GO:0043621: protein self-association2.42E-02
115GO:0102336: 3-oxo-arachidoyl-CoA synthase activity2.47E-02
116GO:0102337: 3-oxo-cerotoyl-CoA synthase activity2.47E-02
117GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity2.47E-02
118GO:0051536: iron-sulfur cluster binding2.66E-02
119GO:0004407: histone deacetylase activity2.66E-02
120GO:0003714: transcription corepressor activity2.66E-02
121GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds2.70E-02
122GO:0051087: chaperone binding2.85E-02
123GO:0015079: potassium ion transmembrane transporter activity2.85E-02
124GO:0003899: DNA-directed 5'-3' RNA polymerase activity3.01E-02
125GO:0033612: receptor serine/threonine kinase binding3.05E-02
126GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity3.25E-02
127GO:0030570: pectate lyase activity3.46E-02
128GO:0008514: organic anion transmembrane transporter activity3.67E-02
129GO:0022857: transmembrane transporter activity4.03E-02
130GO:0008536: Ran GTPase binding4.33E-02
131GO:0008080: N-acetyltransferase activity4.33E-02
132GO:0010181: FMN binding4.56E-02
133GO:0004872: receptor activity4.80E-02
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Gene type



Gene DE type