co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G43870

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0034337: RNA folding	0.00E+00
2	GO:1901918: negative regulation of exoribonuclease activity	0.00E+00
3	GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation	0.00E+00
4	GO:0033494: ferulate metabolic process	0.00E+00
5	GO:0090279: regulation of calcium ion import	0.00E+00
6	GO:0090470: shoot organ boundary specification	0.00E+00
7	GO:0032928: regulation of superoxide anion generation	0.00E+00
8	GO:2000042: negative regulation of double-strand break repair via homologous recombination	0.00E+00
9	GO:0008298: intracellular mRNA localization	0.00E+00
10	GO:0071474: cellular hyperosmotic response	0.00E+00
11	GO:0015995: chlorophyll biosynthetic process	1.84E-06
12	GO:0010207: photosystem II assembly	1.01E-05
13	GO:0010143: cutin biosynthetic process	1.01E-05
14	GO:0055114: oxidation-reduction process	2.60E-05
15	GO:2001141: regulation of RNA biosynthetic process	8.23E-05
16	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	8.23E-05
17	GO:0031365: N-terminal protein amino acid modification	2.19E-04
18	GO:0042549: photosystem II stabilization	3.08E-04
19	GO:0010362: negative regulation of anion channel activity by blue light	5.09E-04
20	GO:0015969: guanosine tetraphosphate metabolic process	5.09E-04
21	GO:1902478: negative regulation of defense response to bacterium, incompatible interaction	5.09E-04
22	GO:0031426: polycistronic mRNA processing	5.09E-04
23	GO:1904966: positive regulation of vitamin E biosynthetic process	5.09E-04
24	GO:0043953: protein transport by the Tat complex	5.09E-04
25	GO:0010426: DNA methylation on cytosine within a CHH sequence	5.09E-04
26	GO:0000481: maturation of 5S rRNA	5.09E-04
27	GO:0015801: aromatic amino acid transport	5.09E-04
28	GO:1904964: positive regulation of phytol biosynthetic process	5.09E-04
29	GO:0065002: intracellular protein transmembrane transport	5.09E-04
30	GO:0043686: co-translational protein modification	5.09E-04
31	GO:0043087: regulation of GTPase activity	5.09E-04
32	GO:0071461: cellular response to redox state	5.09E-04
33	GO:1990542: mitochondrial transmembrane transport	5.09E-04
34	GO:0046167: glycerol-3-phosphate biosynthetic process	5.09E-04
35	GO:0043007: maintenance of rDNA	5.09E-04
36	GO:1902458: positive regulation of stomatal opening	5.09E-04
37	GO:0009395: phospholipid catabolic process	5.29E-04
38	GO:0016559: peroxisome fission	6.59E-04
39	GO:0006631: fatty acid metabolic process	6.92E-04
40	GO:0071482: cellular response to light stimulus	8.02E-04
41	GO:1903426: regulation of reactive oxygen species biosynthetic process	1.10E-03
42	GO:0015790: UDP-xylose transport	1.10E-03
43	GO:0051262: protein tetramerization	1.10E-03
44	GO:0035304: regulation of protein dephosphorylation	1.10E-03
45	GO:0080005: photosystem stoichiometry adjustment	1.10E-03
46	GO:0010115: regulation of abscisic acid biosynthetic process	1.10E-03
47	GO:1902326: positive regulation of chlorophyll biosynthetic process	1.10E-03
48	GO:0010541: acropetal auxin transport	1.10E-03
49	GO:0006650: glycerophospholipid metabolic process	1.10E-03
50	GO:0016122: xanthophyll metabolic process	1.10E-03
51	GO:0010155: regulation of proton transport	1.10E-03
52	GO:0015979: photosynthesis	1.20E-03
53	GO:0009773: photosynthetic electron transport in photosystem I	1.52E-03
54	GO:0006352: DNA-templated transcription, initiation	1.52E-03
55	GO:0010027: thylakoid membrane organization	1.67E-03
56	GO:0016024: CDP-diacylglycerol biosynthetic process	1.74E-03
57	GO:0046168: glycerol-3-phosphate catabolic process	1.79E-03
58	GO:0034051: negative regulation of plant-type hypersensitive response	1.79E-03
59	GO:0010160: formation of animal organ boundary	1.79E-03
60	GO:0044375: regulation of peroxisome size	1.79E-03
61	GO:0046621: negative regulation of organ growth	1.79E-03
62	GO:0009266: response to temperature stimulus	2.24E-03
63	GO:0009152: purine ribonucleotide biosynthetic process	2.60E-03
64	GO:0046653: tetrahydrofolate metabolic process	2.60E-03
65	GO:0010239: chloroplast mRNA processing	2.60E-03
66	GO:0009052: pentose-phosphate shunt, non-oxidative branch	2.60E-03
67	GO:0033014: tetrapyrrole biosynthetic process	2.60E-03
68	GO:0043481: anthocyanin accumulation in tissues in response to UV light	2.60E-03
69	GO:0006072: glycerol-3-phosphate metabolic process	2.60E-03
70	GO:0010731: protein glutathionylation	2.60E-03
71	GO:0006424: glutamyl-tRNA aminoacylation	2.60E-03
72	GO:0010371: regulation of gibberellin biosynthetic process	2.60E-03
73	GO:0007568: aging	2.84E-03
74	GO:0009765: photosynthesis, light harvesting	3.50E-03
75	GO:0006021: inositol biosynthetic process	3.50E-03
76	GO:0032366: intracellular sterol transport	3.50E-03
77	GO:0048511: rhythmic process	3.77E-03
78	GO:0044550: secondary metabolite biosynthetic process	4.11E-03
79	GO:0006633: fatty acid biosynthetic process	4.23E-03
80	GO:0016123: xanthophyll biosynthetic process	4.49E-03
81	GO:0000304: response to singlet oxygen	4.49E-03
82	GO:0006465: signal peptide processing	4.49E-03
83	GO:0080110: sporopollenin biosynthetic process	4.49E-03
84	GO:0032543: mitochondrial translation	4.49E-03
85	GO:0010117: photoprotection	4.49E-03
86	GO:0006564: L-serine biosynthetic process	4.49E-03
87	GO:0009904: chloroplast accumulation movement	4.49E-03
88	GO:0016120: carotene biosynthetic process	4.49E-03
89	GO:0010236: plastoquinone biosynthetic process	4.49E-03
90	GO:0045038: protein import into chloroplast thylakoid membrane	4.49E-03
91	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	5.56E-03
92	GO:0006655: phosphatidylglycerol biosynthetic process	5.56E-03
93	GO:0060918: auxin transport	5.56E-03
94	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	5.56E-03
95	GO:0046855: inositol phosphate dephosphorylation	5.56E-03
96	GO:0006520: cellular amino acid metabolic process	6.20E-03
97	GO:0009648: photoperiodism	6.71E-03
98	GO:0009903: chloroplast avoidance movement	6.71E-03
99	GO:0030488: tRNA methylation	6.71E-03
100	GO:1901259: chloroplast rRNA processing	6.71E-03
101	GO:0000054: ribosomal subunit export from nucleus	6.71E-03
102	GO:0048437: floral organ development	7.95E-03
103	GO:0006400: tRNA modification	7.95E-03
104	GO:0006810: transport	8.08E-03
105	GO:0032502: developmental process	8.20E-03
106	GO:0007155: cell adhesion	9.25E-03
107	GO:0009690: cytokinin metabolic process	9.25E-03
108	GO:0032508: DNA duplex unwinding	9.25E-03
109	GO:0042255: ribosome assembly	9.25E-03
110	GO:0006353: DNA-templated transcription, termination	9.25E-03
111	GO:2000070: regulation of response to water deprivation	9.25E-03
112	GO:0009932: cell tip growth	1.06E-02
113	GO:0015996: chlorophyll catabolic process	1.06E-02
114	GO:0007186: G-protein coupled receptor signaling pathway	1.06E-02
115	GO:0006526: arginine biosynthetic process	1.06E-02
116	GO:0009657: plastid organization	1.06E-02
117	GO:0009821: alkaloid biosynthetic process	1.21E-02
118	GO:0051865: protein autoubiquitination	1.21E-02
119	GO:0090305: nucleic acid phosphodiester bond hydrolysis	1.21E-02
120	GO:0010206: photosystem II repair	1.21E-02
121	GO:0006098: pentose-phosphate shunt	1.21E-02
122	GO:0006783: heme biosynthetic process	1.21E-02
123	GO:0048507: meristem development	1.21E-02
124	GO:0010411: xyloglucan metabolic process	1.31E-02
125	GO:0010205: photoinhibition	1.36E-02
126	GO:0009638: phototropism	1.36E-02
127	GO:0006779: porphyrin-containing compound biosynthetic process	1.36E-02
128	GO:0009817: defense response to fungus, incompatible interaction	1.46E-02
129	GO:0018298: protein-chromophore linkage	1.46E-02
130	GO:0006535: cysteine biosynthetic process from serine	1.52E-02
131	GO:0009688: abscisic acid biosynthetic process	1.52E-02
132	GO:0043069: negative regulation of programmed cell death	1.52E-02
133	GO:0000160: phosphorelay signal transduction system	1.53E-02
134	GO:0006811: ion transport	1.61E-02
135	GO:0019684: photosynthesis, light reaction	1.68E-02
136	GO:0008285: negative regulation of cell proliferation	1.68E-02
137	GO:0006415: translational termination	1.68E-02
138	GO:0008361: regulation of cell size	1.85E-02
139	GO:0006790: sulfur compound metabolic process	1.85E-02
140	GO:0045037: protein import into chloroplast stroma	1.85E-02
141	GO:0009637: response to blue light	1.85E-02
142	GO:0009725: response to hormone	2.03E-02
143	GO:0006094: gluconeogenesis	2.03E-02
144	GO:0009767: photosynthetic electron transport chain	2.03E-02
145	GO:0030048: actin filament-based movement	2.03E-02
146	GO:0009785: blue light signaling pathway	2.03E-02
147	GO:0018107: peptidyl-threonine phosphorylation	2.03E-02
148	GO:0009718: anthocyanin-containing compound biosynthetic process	2.03E-02
149	GO:0007623: circadian rhythm	2.04E-02
150	GO:0010540: basipetal auxin transport	2.21E-02
151	GO:0034605: cellular response to heat	2.21E-02
152	GO:0010020: chloroplast fission	2.21E-02
153	GO:0032259: methylation	2.22E-02
154	GO:0006629: lipid metabolic process	2.36E-02
155	GO:0009640: photomorphogenesis	2.39E-02
156	GO:0007031: peroxisome organization	2.40E-02
157	GO:0042343: indole glucosinolate metabolic process	2.40E-02
158	GO:0019853: L-ascorbic acid biosynthetic process	2.40E-02
159	GO:0046854: phosphatidylinositol phosphorylation	2.40E-02
160	GO:0042546: cell wall biogenesis	2.49E-02
161	GO:0006833: water transport	2.59E-02
162	GO:0010025: wax biosynthetic process	2.59E-02
163	GO:0042753: positive regulation of circadian rhythm	2.59E-02
164	GO:0006636: unsaturated fatty acid biosynthetic process	2.59E-02
165	GO:0009636: response to toxic substance	2.69E-02
166	GO:0019344: cysteine biosynthetic process	2.79E-02
167	GO:0006289: nucleotide-excision repair	2.79E-02
168	GO:0007017: microtubule-based process	2.99E-02
169	GO:0010073: meristem maintenance	2.99E-02
170	GO:0098542: defense response to other organism	3.20E-02
171	GO:0010431: seed maturation	3.20E-02
172	GO:0061077: chaperone-mediated protein folding	3.20E-02
173	GO:0031408: oxylipin biosynthetic process	3.20E-02
174	GO:0006306: DNA methylation	3.20E-02
175	GO:0003333: amino acid transmembrane transport	3.20E-02
176	GO:0010017: red or far-red light signaling pathway	3.42E-02
177	GO:0016226: iron-sulfur cluster assembly	3.42E-02
178	GO:0080092: regulation of pollen tube growth	3.42E-02
179	GO:0009658: chloroplast organization	3.52E-02
180	GO:0010227: floral organ abscission	3.64E-02
181	GO:0006096: glycolytic process	3.81E-02
182	GO:0010584: pollen exine formation	3.86E-02
183	GO:0006817: phosphate ion transport	3.86E-02
184	GO:0048443: stamen development	3.86E-02
185	GO:0019722: calcium-mediated signaling	3.86E-02
186	GO:0009306: protein secretion	3.86E-02
187	GO:0016117: carotenoid biosynthetic process	4.08E-02
188	GO:0042335: cuticle development	4.32E-02
189	GO:0034220: ion transmembrane transport	4.32E-02
190	GO:0009958: positive gravitropism	4.55E-02
191	GO:0010182: sugar mediated signaling pathway	4.55E-02
192	GO:0006396: RNA processing	4.71E-02
193	GO:0009735: response to cytokinin	4.77E-02
194	GO:0007018: microtubule-based movement	4.79E-02
195	GO:0009742: brassinosteroid mediated signaling pathway	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0004740: pyruvate dehydrogenase (acetyl-transferring) kinase activity	0.00E+00
2	GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity	0.00E+00
3	GO:0019144: ADP-sugar diphosphatase activity	0.00E+00
4	GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity	0.00E+00
5	GO:0046406: magnesium protoporphyrin IX methyltransferase activity	0.00E+00
6	GO:0009673: low-affinity phosphate transmembrane transporter activity	0.00E+00
7	GO:0036361: racemase activity, acting on amino acids and derivatives	0.00E+00
8	GO:0050613: delta14-sterol reductase activity	0.00E+00
9	GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity	0.00E+00
10	GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity	0.00E+00
11	GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives	0.00E+00
12	GO:0045435: lycopene epsilon cyclase activity	0.00E+00
13	GO:0008942: nitrite reductase [NAD(P)H] activity	0.00E+00
14	GO:0102193: protein-ribulosamine 3-kinase activity	0.00E+00
15	GO:0016491: oxidoreductase activity	7.40E-07
16	GO:0005528: FK506 binding	2.07E-05
17	GO:0016851: magnesium chelatase activity	8.23E-05
18	GO:0001053: plastid sigma factor activity	1.43E-04
19	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.43E-04
20	GO:0016987: sigma factor activity	1.43E-04
21	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.61E-04
22	GO:0000293: ferric-chelate reductase activity	3.08E-04
23	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	3.08E-04
24	GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity	5.09E-04
25	GO:0005227: calcium activated cation channel activity	5.09E-04
26	GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity	5.09E-04
27	GO:0009496: plastoquinol--plastocyanin reductase activity	5.09E-04
28	GO:0080042: ADP-glucose pyrophosphohydrolase activity	5.09E-04
29	GO:0080132: fatty acid alpha-hydroxylase activity	5.09E-04
30	GO:0010242: oxygen evolving activity	5.09E-04
31	GO:0004325: ferrochelatase activity	5.09E-04
32	GO:0042586: peptide deformylase activity	5.09E-04
33	GO:0004328: formamidase activity	5.09E-04
34	GO:0031957: very long-chain fatty acid-CoA ligase activity	5.09E-04
35	GO:0010347: L-galactose-1-phosphate phosphatase activity	5.09E-04
36	GO:0003993: acid phosphatase activity	5.68E-04
37	GO:0016788: hydrolase activity, acting on ester bonds	6.24E-04
38	GO:0019843: rRNA binding	6.36E-04
39	GO:0048038: quinone binding	1.05E-03
40	GO:0009977: proton motive force dependent protein transmembrane transporter activity	1.10E-03
41	GO:0004617: phosphoglycerate dehydrogenase activity	1.10E-03
42	GO:0052832: inositol monophosphate 3-phosphatase activity	1.10E-03
43	GO:0015173: aromatic amino acid transmembrane transporter activity	1.10E-03
44	GO:0018708: thiol S-methyltransferase activity	1.10E-03
45	GO:0034432: bis(5'-adenosyl)-pentaphosphatase activity	1.10E-03
46	GO:0004081: bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity	1.10E-03
47	GO:0043024: ribosomal small subunit binding	1.10E-03
48	GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity	1.10E-03
49	GO:0008934: inositol monophosphate 1-phosphatase activity	1.10E-03
50	GO:0052833: inositol monophosphate 4-phosphatase activity	1.10E-03
51	GO:0005464: UDP-xylose transmembrane transporter activity	1.10E-03
52	GO:0008728: GTP diphosphokinase activity	1.10E-03
53	GO:0050017: L-3-cyanoalanine synthase activity	1.10E-03
54	GO:0042389: omega-3 fatty acid desaturase activity	1.10E-03
55	GO:0080041: ADP-ribose pyrophosphohydrolase activity	1.10E-03
56	GO:0005504: fatty acid binding	1.79E-03
57	GO:0050734: hydroxycinnamoyltransferase activity	1.79E-03
58	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	1.79E-03
59	GO:0004751: ribose-5-phosphate isomerase activity	1.79E-03
60	GO:0030267: glyoxylate reductase (NADP) activity	1.79E-03
61	GO:0016742: hydroxymethyl-, formyl- and related transferase activity	1.79E-03
62	GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity	1.79E-03
63	GO:0008864: formyltetrahydrofolate deformylase activity	1.79E-03
64	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	1.79E-03
65	GO:0004565: beta-galactosidase activity	1.98E-03
66	GO:0008266: poly(U) RNA binding	2.24E-03
67	GO:0017077: oxidative phosphorylation uncoupler activity	2.60E-03
68	GO:0048027: mRNA 5'-UTR binding	2.60E-03
69	GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	2.60E-03
70	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	2.60E-03
71	GO:0009882: blue light photoreceptor activity	2.60E-03
72	GO:0016787: hydrolase activity	3.24E-03
73	GO:0070628: proteasome binding	3.50E-03
74	GO:0045430: chalcone isomerase activity	3.50E-03
75	GO:0043495: protein anchor	3.50E-03
76	GO:0005275: amine transmembrane transporter activity	4.49E-03
77	GO:0003727: single-stranded RNA binding	4.90E-03
78	GO:0004332: fructose-bisphosphate aldolase activity	5.56E-03
79	GO:0031593: polyubiquitin binding	5.56E-03
80	GO:0035673: oligopeptide transmembrane transporter activity	5.56E-03
81	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	5.56E-03
82	GO:0051287: NAD binding	5.64E-03
83	GO:0008080: N-acetyltransferase activity	6.20E-03
84	GO:0004124: cysteine synthase activity	6.71E-03
85	GO:0051920: peroxiredoxin activity	6.71E-03
86	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	6.71E-03
87	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	6.71E-03
88	GO:0102391: decanoate--CoA ligase activity	6.71E-03
89	GO:0005261: cation channel activity	6.71E-03
90	GO:0003886: DNA (cytosine-5-)-methyltransferase activity	6.71E-03
91	GO:0009927: histidine phosphotransfer kinase activity	6.71E-03
92	GO:0042802: identical protein binding	7.04E-03
93	GO:0016762: xyloglucan:xyloglucosyl transferase activity	7.67E-03
94	GO:0008235: metalloexopeptidase activity	7.95E-03
95	GO:0019899: enzyme binding	7.95E-03
96	GO:0004467: long-chain fatty acid-CoA ligase activity	7.95E-03
97	GO:0016209: antioxidant activity	9.25E-03
98	GO:0008173: RNA methyltransferase activity	1.06E-02
99	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	1.06E-02
100	GO:0071949: FAD binding	1.21E-02
101	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.31E-02
102	GO:0004743: pyruvate kinase activity	1.36E-02
103	GO:0030955: potassium ion binding	1.36E-02
104	GO:0016844: strictosidine synthase activity	1.36E-02
105	GO:0016887: ATPase activity	1.51E-02
106	GO:0047372: acylglycerol lipase activity	1.68E-02
107	GO:0005089: Rho guanyl-nucleotide exchange factor activity	1.68E-02
108	GO:0004177: aminopeptidase activity	1.68E-02
109	GO:0015198: oligopeptide transporter activity	1.85E-02
110	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	1.94E-02
111	GO:0008081: phosphoric diester hydrolase activity	2.03E-02
112	GO:0010329: auxin efflux transmembrane transporter activity	2.03E-02
113	GO:0005315: inorganic phosphate transmembrane transporter activity	2.03E-02
114	GO:0031072: heat shock protein binding	2.03E-02
115	GO:0000155: phosphorelay sensor kinase activity	2.03E-02
116	GO:0003774: motor activity	2.21E-02
117	GO:0031624: ubiquitin conjugating enzyme binding	2.21E-02
118	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	2.21E-02
119	GO:0004364: glutathione transferase activity	2.30E-02
120	GO:0005506: iron ion binding	2.35E-02
121	GO:0043130: ubiquitin binding	2.79E-02
122	GO:0051536: iron-sulfur cluster binding	2.79E-02
123	GO:0051087: chaperone binding	2.99E-02
124	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	3.23E-02
125	GO:0003690: double-stranded DNA binding	3.34E-02
126	GO:0004601: peroxidase activity	3.52E-02
127	GO:0022891: substrate-specific transmembrane transporter activity	3.64E-02
128	GO:0030570: pectate lyase activity	3.64E-02
129	GO:0005525: GTP binding	4.35E-02
130	GO:0050662: coenzyme binding	4.79E-02
131	GO:0010181: FMN binding	4.79E-02