GO Enrichment Analysis of Co-expressed Genes with
AT5G42670
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090615: mitochondrial mRNA processing | 0.00E+00 |
| 2 | GO:0042794: rRNA transcription from plastid promoter | 0.00E+00 |
| 3 | GO:0035884: arabinan biosynthetic process | 0.00E+00 |
| 4 | GO:0009606: tropism | 0.00E+00 |
| 5 | GO:0042793: transcription from plastid promoter | 7.62E-08 |
| 6 | GO:0009658: chloroplast organization | 1.45E-05 |
| 7 | GO:0042255: ribosome assembly | 4.35E-05 |
| 8 | GO:0006353: DNA-templated transcription, termination | 4.35E-05 |
| 9 | GO:0034757: negative regulation of iron ion transport | 8.43E-05 |
| 10 | GO:0080112: seed growth | 8.43E-05 |
| 11 | GO:1903866: palisade mesophyll development | 8.43E-05 |
| 12 | GO:1905039: carboxylic acid transmembrane transport | 8.43E-05 |
| 13 | GO:1905200: gibberellic acid transmembrane transport | 8.43E-05 |
| 14 | GO:0009451: RNA modification | 8.69E-05 |
| 15 | GO:0010271: regulation of chlorophyll catabolic process | 2.00E-04 |
| 16 | GO:0080009: mRNA methylation | 2.00E-04 |
| 17 | GO:0010569: regulation of double-strand break repair via homologous recombination | 2.00E-04 |
| 18 | GO:0080117: secondary growth | 3.35E-04 |
| 19 | GO:0090391: granum assembly | 3.35E-04 |
| 20 | GO:0010371: regulation of gibberellin biosynthetic process | 4.84E-04 |
| 21 | GO:0010239: chloroplast mRNA processing | 4.84E-04 |
| 22 | GO:0009800: cinnamic acid biosynthetic process | 4.84E-04 |
| 23 | GO:0080156: mitochondrial mRNA modification | 6.25E-04 |
| 24 | GO:0006346: methylation-dependent chromatin silencing | 6.44E-04 |
| 25 | GO:1900864: mitochondrial RNA modification | 6.44E-04 |
| 26 | GO:0048497: maintenance of floral organ identity | 8.14E-04 |
| 27 | GO:0008380: RNA splicing | 9.85E-04 |
| 28 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 9.94E-04 |
| 29 | GO:0010315: auxin efflux | 9.94E-04 |
| 30 | GO:0006559: L-phenylalanine catabolic process | 9.94E-04 |
| 31 | GO:0009913: epidermal cell differentiation | 9.94E-04 |
| 32 | GO:0048831: regulation of shoot system development | 9.94E-04 |
| 33 | GO:0009416: response to light stimulus | 1.13E-03 |
| 34 | GO:0048509: regulation of meristem development | 1.18E-03 |
| 35 | GO:0009955: adaxial/abaxial pattern specification | 1.18E-03 |
| 36 | GO:0006955: immune response | 1.39E-03 |
| 37 | GO:0052543: callose deposition in cell wall | 1.60E-03 |
| 38 | GO:0009642: response to light intensity | 1.60E-03 |
| 39 | GO:0048766: root hair initiation | 1.60E-03 |
| 40 | GO:0007389: pattern specification process | 1.83E-03 |
| 41 | GO:0098656: anion transmembrane transport | 2.06E-03 |
| 42 | GO:0031627: telomeric loop formation | 2.56E-03 |
| 43 | GO:0015770: sucrose transport | 2.82E-03 |
| 44 | GO:0009089: lysine biosynthetic process via diaminopimelate | 2.82E-03 |
| 45 | GO:0010020: chloroplast fission | 3.66E-03 |
| 46 | GO:0080188: RNA-directed DNA methylation | 3.95E-03 |
| 47 | GO:0009901: anther dehiscence | 3.95E-03 |
| 48 | GO:0000027: ribosomal large subunit assembly | 4.57E-03 |
| 49 | GO:0016998: cell wall macromolecule catabolic process | 5.22E-03 |
| 50 | GO:0010431: seed maturation | 5.22E-03 |
| 51 | GO:0006306: DNA methylation | 5.22E-03 |
| 52 | GO:0071215: cellular response to abscisic acid stimulus | 5.89E-03 |
| 53 | GO:0010082: regulation of root meristem growth | 5.89E-03 |
| 54 | GO:0045490: pectin catabolic process | 6.01E-03 |
| 55 | GO:0070417: cellular response to cold | 6.60E-03 |
| 56 | GO:0010087: phloem or xylem histogenesis | 6.97E-03 |
| 57 | GO:0009958: positive gravitropism | 7.34E-03 |
| 58 | GO:0007018: microtubule-based movement | 7.72E-03 |
| 59 | GO:0048825: cotyledon development | 8.10E-03 |
| 60 | GO:0032502: developmental process | 8.90E-03 |
| 61 | GO:0009630: gravitropism | 8.90E-03 |
| 62 | GO:0031047: gene silencing by RNA | 8.90E-03 |
| 63 | GO:0010252: auxin homeostasis | 9.72E-03 |
| 64 | GO:0006970: response to osmotic stress | 1.00E-02 |
| 65 | GO:0010027: thylakoid membrane organization | 1.10E-02 |
| 66 | GO:0010029: regulation of seed germination | 1.14E-02 |
| 67 | GO:0009832: plant-type cell wall biogenesis | 1.37E-02 |
| 68 | GO:0048767: root hair elongation | 1.37E-02 |
| 69 | GO:0000160: phosphorelay signal transduction system | 1.37E-02 |
| 70 | GO:0006281: DNA repair | 1.71E-02 |
| 71 | GO:0030001: metal ion transport | 1.72E-02 |
| 72 | GO:0048364: root development | 1.78E-02 |
| 73 | GO:0009926: auxin polar transport | 1.88E-02 |
| 74 | GO:0008283: cell proliferation | 1.88E-02 |
| 75 | GO:0009636: response to toxic substance | 2.04E-02 |
| 76 | GO:0009736: cytokinin-activated signaling pathway | 2.32E-02 |
| 77 | GO:0006355: regulation of transcription, DNA-templated | 2.39E-02 |
| 78 | GO:0009909: regulation of flower development | 2.50E-02 |
| 79 | GO:0048367: shoot system development | 2.68E-02 |
| 80 | GO:0009058: biosynthetic process | 3.64E-02 |
| 81 | GO:0009845: seed germination | 3.70E-02 |
| 82 | GO:0055085: transmembrane transport | 3.85E-02 |
| 83 | GO:0009790: embryo development | 3.91E-02 |
| 84 | GO:0010468: regulation of gene expression | 4.99E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004519: endonuclease activity | 7.04E-05 |
| 2 | GO:0004016: adenylate cyclase activity | 8.43E-05 |
| 3 | GO:1905201: gibberellin transmembrane transporter activity | 8.43E-05 |
| 4 | GO:0008836: diaminopimelate decarboxylase activity | 8.43E-05 |
| 5 | GO:0042834: peptidoglycan binding | 8.43E-05 |
| 6 | GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity | 8.43E-05 |
| 7 | GO:0003697: single-stranded DNA binding | 1.15E-04 |
| 8 | GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity | 2.00E-04 |
| 9 | GO:0009884: cytokinin receptor activity | 2.00E-04 |
| 10 | GO:0003690: double-stranded DNA binding | 2.62E-04 |
| 11 | GO:0005034: osmosensor activity | 3.35E-04 |
| 12 | GO:0045548: phenylalanine ammonia-lyase activity | 3.35E-04 |
| 13 | GO:0030570: pectate lyase activity | 3.73E-04 |
| 14 | GO:0003727: single-stranded RNA binding | 4.05E-04 |
| 15 | GO:0019843: rRNA binding | 5.30E-04 |
| 16 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 8.14E-04 |
| 17 | GO:0003723: RNA binding | 8.60E-04 |
| 18 | GO:0019900: kinase binding | 1.18E-03 |
| 19 | GO:0009672: auxin:proton symporter activity | 2.30E-03 |
| 20 | GO:0004673: protein histidine kinase activity | 2.56E-03 |
| 21 | GO:0003691: double-stranded telomeric DNA binding | 2.82E-03 |
| 22 | GO:0008515: sucrose transmembrane transporter activity | 2.82E-03 |
| 23 | GO:0005315: inorganic phosphate transmembrane transporter activity | 3.37E-03 |
| 24 | GO:0000155: phosphorelay sensor kinase activity | 3.37E-03 |
| 25 | GO:0009982: pseudouridine synthase activity | 3.37E-03 |
| 26 | GO:0010329: auxin efflux transmembrane transporter activity | 3.37E-03 |
| 27 | GO:0051119: sugar transmembrane transporter activity | 3.95E-03 |
| 28 | GO:0043424: protein histidine kinase binding | 4.89E-03 |
| 29 | GO:0004176: ATP-dependent peptidase activity | 5.22E-03 |
| 30 | GO:0015144: carbohydrate transmembrane transporter activity | 5.22E-03 |
| 31 | GO:0005351: sugar:proton symporter activity | 5.88E-03 |
| 32 | GO:0008514: organic anion transmembrane transporter activity | 6.24E-03 |
| 33 | GO:0003713: transcription coactivator activity | 7.34E-03 |
| 34 | GO:0001085: RNA polymerase II transcription factor binding | 7.34E-03 |
| 35 | GO:0004518: nuclease activity | 8.90E-03 |
| 36 | GO:0003682: chromatin binding | 9.84E-03 |
| 37 | GO:0008237: metallopeptidase activity | 1.01E-02 |
| 38 | GO:0008375: acetylglucosaminyltransferase activity | 1.19E-02 |
| 39 | GO:0004222: metalloendopeptidase activity | 1.42E-02 |
| 40 | GO:0004871: signal transducer activity | 1.45E-02 |
| 41 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 1.47E-02 |
| 42 | GO:0003777: microtubule motor activity | 2.50E-02 |
| 43 | GO:0016887: ATPase activity | 2.65E-02 |
| 44 | GO:0016874: ligase activity | 2.86E-02 |
| 45 | GO:0003735: structural constituent of ribosome | 3.48E-02 |
| 46 | GO:0016829: lyase activity | 3.70E-02 |
| 47 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 3.84E-02 |