co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G41950

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0019516: lactate oxidation	0.00E+00
2	GO:0046909: intermembrane transport	0.00E+00
3	GO:0006144: purine nucleobase metabolic process	3.77E-05
4	GO:0019628: urate catabolic process	3.77E-05
5	GO:0006511: ubiquitin-dependent protein catabolic process	3.83E-05
6	GO:0010540: basipetal auxin transport	5.65E-05
7	GO:0018345: protein palmitoylation	9.40E-05
8	GO:0051258: protein polymerization	9.40E-05
9	GO:0018342: protein prenylation	1.63E-04
10	GO:0048577: negative regulation of short-day photoperiodism, flowering	2.40E-04
11	GO:0010255: glucose mediated signaling pathway	2.40E-04
12	GO:0009963: positive regulation of flavonoid biosynthetic process	2.40E-04
13	GO:1903830: magnesium ion transmembrane transport	3.24E-04
14	GO:0006950: response to stress	3.80E-04
15	GO:0032957: inositol trisphosphate metabolic process	4.13E-04
16	GO:0002238: response to molecule of fungal origin	5.07E-04
17	GO:0006014: D-ribose metabolic process	5.07E-04
18	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	5.07E-04
19	GO:0006120: mitochondrial electron transport, NADH to ubiquinone	6.05E-04
20	GO:0022904: respiratory electron transport chain	7.07E-04
21	GO:0015693: magnesium ion transport	7.07E-04
22	GO:0007186: G-protein coupled receptor signaling pathway	9.23E-04
23	GO:0046685: response to arsenic-containing substance	1.04E-03
24	GO:0030148: sphingolipid biosynthetic process	1.40E-03
25	GO:0010102: lateral root morphogenesis	1.67E-03
26	GO:0006807: nitrogen compound metabolic process	1.67E-03
27	GO:0009845: seed germination	1.68E-03
28	GO:0010223: secondary shoot formation	1.81E-03
29	GO:0009934: regulation of meristem structural organization	1.81E-03
30	GO:0007031: peroxisome organization	1.95E-03
31	GO:0009737: response to abscisic acid	2.06E-03
32	GO:0000162: tryptophan biosynthetic process	2.10E-03
33	GO:0009739: response to gibberellin	2.38E-03
34	GO:0007166: cell surface receptor signaling pathway	2.43E-03
35	GO:0015992: proton transport	2.56E-03
36	GO:0071456: cellular response to hypoxia	2.72E-03
37	GO:0016117: carotenoid biosynthetic process	3.22E-03
38	GO:0010118: stomatal movement	3.40E-03
39	GO:0061025: membrane fusion	3.76E-03
40	GO:0009723: response to ethylene	3.78E-03
41	GO:0019252: starch biosynthetic process	3.94E-03
42	GO:0009651: response to salt stress	4.10E-03
43	GO:0009733: response to auxin	4.45E-03
44	GO:0030163: protein catabolic process	4.51E-03
45	GO:0006914: autophagy	4.70E-03
46	GO:0016579: protein deubiquitination	5.11E-03
47	GO:0006906: vesicle fusion	5.73E-03
48	GO:0009751: response to salicylic acid	5.87E-03
49	GO:0009753: response to jasmonic acid	6.39E-03
50	GO:0009813: flavonoid biosynthetic process	6.60E-03
51	GO:0048527: lateral root development	7.05E-03
52	GO:0009910: negative regulation of flower development	7.05E-03
53	GO:0009853: photorespiration	7.51E-03
54	GO:0030001: metal ion transport	8.23E-03
55	GO:0006887: exocytosis	8.47E-03
56	GO:0006631: fatty acid metabolic process	8.47E-03
57	GO:0009926: auxin polar transport	8.96E-03
58	GO:0000165: MAPK cascade	1.02E-02
59	GO:0009555: pollen development	1.06E-02
60	GO:0051603: proteolysis involved in cellular protein catabolic process	1.13E-02
61	GO:0009909: regulation of flower development	1.19E-02
62	GO:0045893: positive regulation of transcription, DNA-templated	1.21E-02
63	GO:0006396: RNA processing	1.45E-02
64	GO:0055114: oxidation-reduction process	1.48E-02
65	GO:0009742: brassinosteroid mediated signaling pathway	1.48E-02
66	GO:0007623: circadian rhythm	2.09E-02
67	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	2.26E-02
68	GO:0045944: positive regulation of transcription from RNA polymerase II promoter	2.70E-02
69	GO:0015031: protein transport	2.73E-02
70	GO:0080167: response to karrikin	3.32E-02
71	GO:0015979: photosynthesis	3.65E-02
72	GO:0045454: cell redox homeostasis	3.78E-02

Rank	GO Term	Adjusted P value
1	GO:0052684: L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity	0.00E+00
2	GO:0051990: (R)-2-hydroxyglutarate dehydrogenase activity	0.00E+00
3	GO:0004846: urate oxidase activity	0.00E+00
4	GO:0004298: threonine-type endopeptidase activity	1.08E-08
5	GO:0008233: peptidase activity	3.75E-05
6	GO:0004458: D-lactate dehydrogenase (cytochrome) activity	3.77E-05
7	GO:0047545: 2-hydroxyglutarate dehydrogenase activity	3.77E-05
8	GO:0045140: inositol phosphoceramide synthase activity	9.40E-05
9	GO:0005504: fatty acid binding	1.63E-04
10	GO:0047325: inositol tetrakisphosphate 1-kinase activity	1.63E-04
11	GO:0004324: ferredoxin-NADP+ reductase activity	1.63E-04
12	GO:0052726: inositol-1,3,4-trisphosphate 5-kinase activity	1.63E-04
13	GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity	2.40E-04
14	GO:0045430: chalcone isomerase activity	3.24E-04
15	GO:0004834: tryptophan synthase activity	3.24E-04
16	GO:0102490: 8-oxo-dGTP phosphohydrolase activity	3.24E-04
17	GO:0004747: ribokinase activity	6.05E-04
18	GO:0008865: fructokinase activity	8.13E-04
19	GO:0071949: FAD binding	1.04E-03
20	GO:0008327: methyl-CpG binding	1.40E-03
21	GO:0008794: arsenate reductase (glutaredoxin) activity	1.40E-03
22	GO:0000976: transcription regulatory region sequence-specific DNA binding	1.53E-03
23	GO:0015095: magnesium ion transmembrane transporter activity	1.67E-03
24	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.99E-03
25	GO:0043130: ubiquitin binding	2.25E-03
26	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	2.56E-03
27	GO:0004540: ribonuclease activity	2.56E-03
28	GO:0003713: transcription coactivator activity	3.58E-03
29	GO:0046873: metal ion transmembrane transporter activity	3.58E-03
30	GO:0048038: quinone binding	4.13E-03
31	GO:0008137: NADH dehydrogenase (ubiquinone) activity	4.13E-03
32	GO:0004843: thiol-dependent ubiquitin-specific protease activity	4.13E-03
33	GO:0009055: electron carrier activity	6.39E-03
34	GO:0050897: cobalt ion binding	7.05E-03
35	GO:0000149: SNARE binding	7.99E-03
36	GO:0051539: 4 iron, 4 sulfur cluster binding	8.23E-03
37	GO:0005484: SNAP receptor activity	8.96E-03
38	GO:0005198: structural molecule activity	9.73E-03
39	GO:0016787: hydrolase activity	1.01E-02
40	GO:0016874: ligase activity	1.36E-02
41	GO:0003779: actin binding	1.39E-02
42	GO:0015035: protein disulfide oxidoreductase activity	1.45E-02
43	GO:0005507: copper ion binding	1.51E-02
44	GO:0030170: pyridoxal phosphate binding	1.79E-02
45	GO:0004252: serine-type endopeptidase activity	1.79E-02
46	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	1.82E-02
47	GO:0000287: magnesium ion binding	2.81E-02
48	GO:0016491: oxidoreductase activity	2.83E-02
49	GO:0008270: zinc ion binding	2.99E-02
50	GO:0043565: sequence-specific DNA binding	3.03E-02
51	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	3.78E-02
52	GO:0042803: protein homodimerization activity	3.91E-02
53	GO:0004871: signal transducer activity	3.91E-02
54	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	4.08E-02
55	GO:0016301: kinase activity	4.54E-02