Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G41860

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006005: L-fucose biosynthetic process0.00E+00
2GO:0046109: uridine biosynthetic process0.00E+00
3GO:0009312: oligosaccharide biosynthetic process0.00E+00
4GO:0042350: GDP-L-fucose biosynthetic process0.00E+00
5GO:0033198: response to ATP0.00E+00
6GO:0000731: DNA synthesis involved in DNA repair0.00E+00
7GO:0046680: response to DDT0.00E+00
8GO:0010112: regulation of systemic acquired resistance2.13E-06
9GO:0042351: 'de novo' GDP-L-fucose biosynthetic process3.26E-06
10GO:0034975: protein folding in endoplasmic reticulum1.31E-04
11GO:0000077: DNA damage checkpoint1.31E-04
12GO:0033306: phytol metabolic process1.31E-04
13GO:0000032: cell wall mannoprotein biosynthetic process1.31E-04
14GO:0005976: polysaccharide metabolic process3.03E-04
15GO:0080181: lateral root branching3.03E-04
16GO:0040020: regulation of meiotic nuclear division3.03E-04
17GO:0051258: protein polymerization3.03E-04
18GO:0006468: protein phosphorylation4.33E-04
19GO:1900055: regulation of leaf senescence4.99E-04
20GO:0033591: response to L-ascorbic acid4.99E-04
21GO:0015695: organic cation transport4.99E-04
22GO:0009052: pentose-phosphate shunt, non-oxidative branch7.14E-04
23GO:0010306: rhamnogalacturonan II biosynthetic process7.14E-04
24GO:0009226: nucleotide-sugar biosynthetic process7.14E-04
25GO:0015696: ammonium transport7.14E-04
26GO:0046713: borate transport7.14E-04
27GO:0009298: GDP-mannose biosynthetic process7.14E-04
28GO:0018105: peptidyl-serine phosphorylation8.78E-04
29GO:0072488: ammonium transmembrane transport9.47E-04
30GO:0009229: thiamine diphosphate biosynthetic process1.20E-03
31GO:0045040: protein import into mitochondrial outer membrane1.47E-03
32GO:0045491: xylan metabolic process1.47E-03
33GO:0033365: protein localization to organelle1.47E-03
34GO:0009228: thiamine biosynthetic process1.47E-03
35GO:0006470: protein dephosphorylation1.98E-03
36GO:0046470: phosphatidylcholine metabolic process2.06E-03
37GO:0006614: SRP-dependent cotranslational protein targeting to membrane2.06E-03
38GO:0006605: protein targeting2.39E-03
39GO:0006997: nucleus organization2.73E-03
40GO:0030968: endoplasmic reticulum unfolded protein response2.73E-03
41GO:0009808: lignin metabolic process2.73E-03
42GO:0006261: DNA-dependent DNA replication2.73E-03
43GO:0035556: intracellular signal transduction3.07E-03
44GO:0046916: cellular transition metal ion homeostasis3.08E-03
45GO:0009060: aerobic respiration3.08E-03
46GO:0015780: nucleotide-sugar transport3.08E-03
47GO:0010332: response to gamma radiation3.08E-03
48GO:0019432: triglyceride biosynthetic process3.08E-03
49GO:0046777: protein autophosphorylation4.15E-03
50GO:0046856: phosphatidylinositol dephosphorylation4.24E-03
51GO:0000266: mitochondrial fission4.65E-03
52GO:0006626: protein targeting to mitochondrion5.08E-03
53GO:0018107: peptidyl-threonine phosphorylation5.08E-03
54GO:0006829: zinc II ion transport5.08E-03
55GO:0019853: L-ascorbic acid biosynthetic process5.97E-03
56GO:0010053: root epidermal cell differentiation5.97E-03
57GO:0010167: response to nitrate5.97E-03
58GO:2000377: regulation of reactive oxygen species metabolic process6.91E-03
59GO:0030150: protein import into mitochondrial matrix6.91E-03
60GO:0003333: amino acid transmembrane transport7.91E-03
61GO:0045492: xylan biosynthetic process9.49E-03
62GO:0006284: base-excision repair9.49E-03
63GO:0000413: protein peptidyl-prolyl isomerization1.06E-02
64GO:0042391: regulation of membrane potential1.06E-02
65GO:0009646: response to absence of light1.18E-02
66GO:0009749: response to glucose1.24E-02
67GO:0006891: intra-Golgi vesicle-mediated transport1.30E-02
68GO:0006464: cellular protein modification process1.49E-02
69GO:0006906: vesicle fusion1.82E-02
70GO:0016311: dephosphorylation1.96E-02
71GO:0030244: cellulose biosynthetic process2.03E-02
72GO:0010311: lateral root formation2.11E-02
73GO:0080167: response to karrikin2.12E-02
74GO:0006499: N-terminal protein myristoylation2.18E-02
75GO:0010119: regulation of stomatal movement2.25E-02
76GO:0010043: response to zinc ion2.25E-02
77GO:0007568: aging2.25E-02
78GO:0009910: negative regulation of flower development2.25E-02
79GO:0006865: amino acid transport2.33E-02
80GO:0009867: jasmonic acid mediated signaling pathway2.41E-02
81GO:0007165: signal transduction2.48E-02
82GO:0030001: metal ion transport2.64E-02
83GO:0006839: mitochondrial transport2.64E-02
84GO:0006887: exocytosis2.72E-02
85GO:0006631: fatty acid metabolic process2.72E-02
86GO:0009744: response to sucrose2.88E-02
87GO:0042742: defense response to bacterium3.14E-02
88GO:0016310: phosphorylation3.16E-02
89GO:0006260: DNA replication3.30E-02
90GO:0031347: regulation of defense response3.30E-02
91GO:0006812: cation transport3.39E-02
92GO:0006486: protein glycosylation3.56E-02
93GO:0015031: protein transport4.22E-02
94GO:0042545: cell wall modification4.48E-02
95GO:0009553: embryo sac development4.48E-02
RankGO TermAdjusted P value
1GO:0043916: DNA-7-methylguanine glycosylase activity0.00E+00
2GO:0050334: thiaminase activity0.00E+00
3GO:0052821: DNA-7-methyladenine glycosylase activity0.00E+00
4GO:0050577: GDP-L-fucose synthase activity0.00E+00
5GO:0003905: alkylbase DNA N-glycosylase activity0.00E+00
6GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity0.00E+00
7GO:0052822: DNA-3-methylguanine glycosylase activity0.00E+00
8GO:0004476: mannose-6-phosphate isomerase activity1.31E-04
9GO:0019707: protein-cysteine S-acyltransferase activity1.31E-04
10GO:0030942: endoplasmic reticulum signal peptide binding1.31E-04
11GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity1.31E-04
12GO:0030775: glucuronoxylan 4-O-methyltransferase activity3.03E-04
13GO:0004674: protein serine/threonine kinase activity3.92E-04
14GO:0004751: ribose-5-phosphate isomerase activity4.99E-04
15GO:0016174: NAD(P)H oxidase activity4.99E-04
16GO:0016301: kinase activity5.56E-04
17GO:0005460: UDP-glucose transmembrane transporter activity7.14E-04
18GO:0050662: coenzyme binding9.69E-04
19GO:0016853: isomerase activity9.69E-04
20GO:0005524: ATP binding1.04E-03
21GO:0008725: DNA-3-methyladenine glycosylase activity1.20E-03
22GO:0005459: UDP-galactose transmembrane transporter activity1.20E-03
23GO:0035252: UDP-xylosyltransferase activity1.47E-03
24GO:0008519: ammonium transmembrane transporter activity1.47E-03
25GO:0008375: acetylglucosaminyltransferase activity1.76E-03
26GO:0004144: diacylglycerol O-acyltransferase activity1.76E-03
27GO:0009931: calcium-dependent protein serine/threonine kinase activity1.76E-03
28GO:0102391: decanoate--CoA ligase activity1.76E-03
29GO:0004683: calmodulin-dependent protein kinase activity1.85E-03
30GO:0004467: long-chain fatty acid-CoA ligase activity2.06E-03
31GO:0008312: 7S RNA binding2.39E-03
32GO:0004630: phospholipase D activity2.73E-03
33GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity2.73E-03
34GO:0008138: protein tyrosine/serine/threonine phosphatase activity3.08E-03
35GO:0004713: protein tyrosine kinase activity3.84E-03
36GO:0031072: heat shock protein binding5.08E-03
37GO:0015266: protein channel activity5.08E-03
38GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism5.08E-03
39GO:0005516: calmodulin binding5.27E-03
40GO:0004722: protein serine/threonine phosphatase activity5.38E-03
41GO:0030552: cAMP binding5.97E-03
42GO:0030553: cGMP binding5.97E-03
43GO:0003887: DNA-directed DNA polymerase activity6.43E-03
44GO:0004725: protein tyrosine phosphatase activity6.43E-03
45GO:0005509: calcium ion binding7.31E-03
46GO:0005216: ion channel activity7.40E-03
47GO:0008324: cation transmembrane transporter activity7.40E-03
48GO:0019706: protein-cysteine S-palmitoyltransferase activity7.91E-03
49GO:0003756: protein disulfide isomerase activity9.49E-03
50GO:0005102: receptor binding1.00E-02
51GO:0005249: voltage-gated potassium channel activity1.06E-02
52GO:0030551: cyclic nucleotide binding1.06E-02
53GO:0046873: metal ion transmembrane transporter activity1.12E-02
54GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor1.42E-02
55GO:0004672: protein kinase activity1.48E-02
56GO:0043531: ADP binding1.87E-02
57GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity2.03E-02
58GO:0003993: acid phosphatase activity2.48E-02
59GO:0000149: SNARE binding2.56E-02
60GO:0005484: SNAP receptor activity2.88E-02
61GO:0003755: peptidyl-prolyl cis-trans isomerase activity3.22E-02
62GO:0043565: sequence-specific DNA binding3.44E-02
63GO:0003824: catalytic activity3.53E-02
64GO:0015171: amino acid transmembrane transporter activity3.83E-02
65GO:0045330: aspartyl esterase activity3.83E-02
66GO:0030599: pectinesterase activity4.39E-02
67GO:0051082: unfolded protein binding4.58E-02
68GO:0015035: protein disulfide oxidoreductase activity4.67E-02
69GO:0016887: ATPase activity4.81E-02
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Gene type



Gene DE type