GO Enrichment Analysis of Co-expressed Genes with
AT5G41210
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009606: tropism | 0.00E+00 |
| 2 | GO:0002103: endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | 0.00E+00 |
| 3 | GO:0031222: arabinan catabolic process | 0.00E+00 |
| 4 | GO:0090071: negative regulation of ribosome biogenesis | 0.00E+00 |
| 5 | GO:0035884: arabinan biosynthetic process | 0.00E+00 |
| 6 | GO:0051958: methotrexate transport | 0.00E+00 |
| 7 | GO:0097164: ammonium ion metabolic process | 0.00E+00 |
| 8 | GO:0009734: auxin-activated signaling pathway | 5.55E-08 |
| 9 | GO:0046620: regulation of organ growth | 9.79E-08 |
| 10 | GO:0009926: auxin polar transport | 1.32E-06 |
| 11 | GO:0007389: pattern specification process | 1.28E-05 |
| 12 | GO:0009657: plastid organization | 1.28E-05 |
| 13 | GO:0016556: mRNA modification | 3.55E-05 |
| 14 | GO:0009451: RNA modification | 4.44E-05 |
| 15 | GO:0010252: auxin homeostasis | 4.66E-05 |
| 16 | GO:0009733: response to auxin | 4.96E-05 |
| 17 | GO:2000038: regulation of stomatal complex development | 6.35E-05 |
| 18 | GO:0009658: chloroplast organization | 1.24E-04 |
| 19 | GO:0010480: microsporocyte differentiation | 3.14E-04 |
| 20 | GO:0006436: tryptophanyl-tRNA aminoacylation | 3.14E-04 |
| 21 | GO:1901537: positive regulation of DNA demethylation | 3.14E-04 |
| 22 | GO:0000373: Group II intron splicing | 4.78E-04 |
| 23 | GO:1900865: chloroplast RNA modification | 5.66E-04 |
| 24 | GO:0031425: chloroplast RNA processing | 5.66E-04 |
| 25 | GO:0048439: flower morphogenesis | 6.87E-04 |
| 26 | GO:0070981: L-asparagine biosynthetic process | 6.87E-04 |
| 27 | GO:0018026: peptidyl-lysine monomethylation | 6.87E-04 |
| 28 | GO:1900033: negative regulation of trichome patterning | 6.87E-04 |
| 29 | GO:0009220: pyrimidine ribonucleotide biosynthetic process | 6.87E-04 |
| 30 | GO:1904143: positive regulation of carotenoid biosynthetic process | 6.87E-04 |
| 31 | GO:0006529: asparagine biosynthetic process | 6.87E-04 |
| 32 | GO:0009875: pollen-pistil interaction | 6.87E-04 |
| 33 | GO:2000123: positive regulation of stomatal complex development | 6.87E-04 |
| 34 | GO:0010254: nectary development | 6.87E-04 |
| 35 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 6.87E-04 |
| 36 | GO:0010434: bract formation | 6.87E-04 |
| 37 | GO:0010582: floral meristem determinacy | 8.70E-04 |
| 38 | GO:0009954: proximal/distal pattern formation | 1.11E-03 |
| 39 | GO:0045910: negative regulation of DNA recombination | 1.11E-03 |
| 40 | GO:0009416: response to light stimulus | 1.47E-03 |
| 41 | GO:0046739: transport of virus in multicellular host | 1.60E-03 |
| 42 | GO:2000904: regulation of starch metabolic process | 1.60E-03 |
| 43 | GO:1902476: chloride transmembrane transport | 1.60E-03 |
| 44 | GO:0051513: regulation of monopolar cell growth | 1.60E-03 |
| 45 | GO:0051639: actin filament network formation | 1.60E-03 |
| 46 | GO:0010239: chloroplast mRNA processing | 1.60E-03 |
| 47 | GO:0044211: CTP salvage | 1.60E-03 |
| 48 | GO:0016998: cell wall macromolecule catabolic process | 1.84E-03 |
| 49 | GO:0044205: 'de novo' UMP biosynthetic process | 2.14E-03 |
| 50 | GO:0048629: trichome patterning | 2.14E-03 |
| 51 | GO:0051764: actin crosslink formation | 2.14E-03 |
| 52 | GO:0044206: UMP salvage | 2.14E-03 |
| 53 | GO:0010082: regulation of root meristem growth | 2.20E-03 |
| 54 | GO:0048497: maintenance of floral organ identity | 2.74E-03 |
| 55 | GO:0016123: xanthophyll biosynthetic process | 2.74E-03 |
| 56 | GO:0010158: abaxial cell fate specification | 2.74E-03 |
| 57 | GO:0032876: negative regulation of DNA endoreduplication | 2.74E-03 |
| 58 | GO:0030308: negative regulation of cell growth | 2.74E-03 |
| 59 | GO:0010375: stomatal complex patterning | 2.74E-03 |
| 60 | GO:0009741: response to brassinosteroid | 3.01E-03 |
| 61 | GO:0009646: response to absence of light | 3.24E-03 |
| 62 | GO:0009913: epidermal cell differentiation | 3.38E-03 |
| 63 | GO:0006655: phosphatidylglycerol biosynthetic process | 3.38E-03 |
| 64 | GO:0042793: transcription from plastid promoter | 3.38E-03 |
| 65 | GO:0010405: arabinogalactan protein metabolic process | 3.38E-03 |
| 66 | GO:0010315: auxin efflux | 3.38E-03 |
| 67 | GO:0006206: pyrimidine nucleobase metabolic process | 3.38E-03 |
| 68 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 3.38E-03 |
| 69 | GO:0010583: response to cyclopentenone | 3.97E-03 |
| 70 | GO:0032502: developmental process | 3.97E-03 |
| 71 | GO:1901259: chloroplast rRNA processing | 4.06E-03 |
| 72 | GO:0017148: negative regulation of translation | 4.06E-03 |
| 73 | GO:0009942: longitudinal axis specification | 4.06E-03 |
| 74 | GO:0030488: tRNA methylation | 4.06E-03 |
| 75 | GO:2000037: regulation of stomatal complex patterning | 4.06E-03 |
| 76 | GO:0009828: plant-type cell wall loosening | 4.50E-03 |
| 77 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 4.60E-03 |
| 78 | GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process | 4.80E-03 |
| 79 | GO:0006821: chloride transport | 4.80E-03 |
| 80 | GO:0030307: positive regulation of cell growth | 4.80E-03 |
| 81 | GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway | 4.80E-03 |
| 82 | GO:0006955: immune response | 4.80E-03 |
| 83 | GO:0007050: cell cycle arrest | 4.80E-03 |
| 84 | GO:0010050: vegetative phase change | 4.80E-03 |
| 85 | GO:0048437: floral organ development | 4.80E-03 |
| 86 | GO:0048766: root hair initiation | 5.57E-03 |
| 87 | GO:0070413: trehalose metabolism in response to stress | 5.57E-03 |
| 88 | GO:0001522: pseudouridine synthesis | 5.57E-03 |
| 89 | GO:0009850: auxin metabolic process | 5.57E-03 |
| 90 | GO:0009704: de-etiolation | 5.57E-03 |
| 91 | GO:0030162: regulation of proteolysis | 5.57E-03 |
| 92 | GO:0042255: ribosome assembly | 5.57E-03 |
| 93 | GO:0009827: plant-type cell wall modification | 6.39E-03 |
| 94 | GO:0010497: plasmodesmata-mediated intercellular transport | 6.39E-03 |
| 95 | GO:0000902: cell morphogenesis | 7.24E-03 |
| 96 | GO:0040008: regulation of growth | 7.62E-03 |
| 97 | GO:0009638: phototropism | 8.14E-03 |
| 98 | GO:0006535: cysteine biosynthetic process from serine | 9.07E-03 |
| 99 | GO:0006298: mismatch repair | 9.07E-03 |
| 100 | GO:0006259: DNA metabolic process | 9.07E-03 |
| 101 | GO:0006265: DNA topological change | 1.00E-02 |
| 102 | GO:0048229: gametophyte development | 1.00E-02 |
| 103 | GO:0010015: root morphogenesis | 1.00E-02 |
| 104 | GO:0008361: regulation of cell size | 1.11E-02 |
| 105 | GO:0016024: CDP-diacylglycerol biosynthetic process | 1.11E-02 |
| 106 | GO:0045037: protein import into chloroplast stroma | 1.11E-02 |
| 107 | GO:0009691: cytokinin biosynthetic process | 1.21E-02 |
| 108 | GO:0010075: regulation of meristem growth | 1.21E-02 |
| 109 | GO:0009767: photosynthetic electron transport chain | 1.21E-02 |
| 110 | GO:2000012: regulation of auxin polar transport | 1.21E-02 |
| 111 | GO:0009785: blue light signaling pathway | 1.21E-02 |
| 112 | GO:0010207: photosystem II assembly | 1.32E-02 |
| 113 | GO:0009934: regulation of meristem structural organization | 1.32E-02 |
| 114 | GO:0006541: glutamine metabolic process | 1.32E-02 |
| 115 | GO:0010020: chloroplast fission | 1.32E-02 |
| 116 | GO:0009944: polarity specification of adaxial/abaxial axis | 1.66E-02 |
| 117 | GO:0080147: root hair cell development | 1.66E-02 |
| 118 | GO:0051017: actin filament bundle assembly | 1.66E-02 |
| 119 | GO:0005992: trehalose biosynthetic process | 1.66E-02 |
| 120 | GO:0019344: cysteine biosynthetic process | 1.66E-02 |
| 121 | GO:0009116: nucleoside metabolic process | 1.66E-02 |
| 122 | GO:0006825: copper ion transport | 1.78E-02 |
| 123 | GO:0006418: tRNA aminoacylation for protein translation | 1.78E-02 |
| 124 | GO:0031348: negative regulation of defense response | 2.03E-02 |
| 125 | GO:0009553: embryo sac development | 2.15E-02 |
| 126 | GO:0010227: floral organ abscission | 2.16E-02 |
| 127 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 2.16E-02 |
| 128 | GO:0007275: multicellular organism development | 2.19E-02 |
| 129 | GO:0010091: trichome branching | 2.29E-02 |
| 130 | GO:0009742: brassinosteroid mediated signaling pathway | 2.35E-02 |
| 131 | GO:0008033: tRNA processing | 2.57E-02 |
| 132 | GO:0048653: anther development | 2.57E-02 |
| 133 | GO:0042631: cellular response to water deprivation | 2.57E-02 |
| 134 | GO:0055085: transmembrane transport | 2.67E-02 |
| 135 | GO:0009958: positive gravitropism | 2.71E-02 |
| 136 | GO:0006662: glycerol ether metabolic process | 2.71E-02 |
| 137 | GO:0048868: pollen tube development | 2.71E-02 |
| 138 | GO:0006814: sodium ion transport | 2.85E-02 |
| 139 | GO:0007059: chromosome segregation | 2.85E-02 |
| 140 | GO:0009058: biosynthetic process | 2.93E-02 |
| 141 | GO:0009793: embryo development ending in seed dormancy | 2.96E-02 |
| 142 | GO:0048825: cotyledon development | 3.00E-02 |
| 143 | GO:0008654: phospholipid biosynthetic process | 3.00E-02 |
| 144 | GO:0009851: auxin biosynthetic process | 3.00E-02 |
| 145 | GO:0010183: pollen tube guidance | 3.00E-02 |
| 146 | GO:0080156: mitochondrial mRNA modification | 3.15E-02 |
| 147 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 3.15E-02 |
| 148 | GO:0071554: cell wall organization or biogenesis | 3.15E-02 |
| 149 | GO:0006397: mRNA processing | 3.19E-02 |
| 150 | GO:0048364: root development | 3.19E-02 |
| 151 | GO:0009790: embryo development | 3.24E-02 |
| 152 | GO:0009630: gravitropism | 3.30E-02 |
| 153 | GO:0010090: trichome morphogenesis | 3.45E-02 |
| 154 | GO:1901657: glycosyl compound metabolic process | 3.45E-02 |
| 155 | GO:0005975: carbohydrate metabolic process | 3.67E-02 |
| 156 | GO:0007267: cell-cell signaling | 3.77E-02 |
| 157 | GO:0010027: thylakoid membrane organization | 4.09E-02 |
| 158 | GO:0006974: cellular response to DNA damage stimulus | 4.42E-02 |
| 159 | GO:0008380: RNA splicing | 4.56E-02 |
| 160 | GO:0010411: xyloglucan metabolic process | 4.59E-02 |
| 161 | GO:0016567: protein ubiquitination | 4.87E-02 |
| 162 | GO:0048481: plant ovule development | 4.93E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004588: orotate phosphoribosyltransferase activity | 0.00E+00 |
| 2 | GO:0004590: orotidine-5'-phosphate decarboxylase activity | 0.00E+00 |
| 3 | GO:0015350: methotrexate transporter activity | 0.00E+00 |
| 4 | GO:0015231: 5-formyltetrahydrofolate transporter activity | 0.00E+00 |
| 5 | GO:0004519: endonuclease activity | 1.81E-07 |
| 6 | GO:0009672: auxin:proton symporter activity | 2.37E-05 |
| 7 | GO:0010329: auxin efflux transmembrane transporter activity | 6.06E-05 |
| 8 | GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity | 3.14E-04 |
| 9 | GO:0004830: tryptophan-tRNA ligase activity | 3.14E-04 |
| 10 | GO:0042834: peptidoglycan binding | 3.14E-04 |
| 11 | GO:0004008: copper-exporting ATPase activity | 3.14E-04 |
| 12 | GO:0003867: 4-aminobutyrate transaminase activity | 3.14E-04 |
| 13 | GO:0004071: aspartate-ammonia ligase activity | 3.14E-04 |
| 14 | GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity | 3.14E-04 |
| 15 | GO:0052381: tRNA dimethylallyltransferase activity | 3.14E-04 |
| 16 | GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity | 6.87E-04 |
| 17 | GO:0008517: folic acid transporter activity | 6.87E-04 |
| 18 | GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity | 6.87E-04 |
| 19 | GO:0008805: carbon-monoxide oxygenase activity | 6.87E-04 |
| 20 | GO:0019843: rRNA binding | 9.93E-04 |
| 21 | GO:0047334: diphosphate-fructose-6-phosphate 1-phosphotransferase activity | 1.11E-03 |
| 22 | GO:0003723: RNA binding | 1.18E-03 |
| 23 | GO:0043023: ribosomal large subunit binding | 1.60E-03 |
| 24 | GO:0008508: bile acid:sodium symporter activity | 1.60E-03 |
| 25 | GO:0001872: (1->3)-beta-D-glucan binding | 1.60E-03 |
| 26 | GO:0005253: anion channel activity | 2.14E-03 |
| 27 | GO:0046556: alpha-L-arabinofuranosidase activity | 2.14E-03 |
| 28 | GO:0016279: protein-lysine N-methyltransferase activity | 2.14E-03 |
| 29 | GO:0004845: uracil phosphoribosyltransferase activity | 2.14E-03 |
| 30 | GO:0005215: transporter activity | 2.32E-03 |
| 31 | GO:0004462: lactoylglutathione lyase activity | 3.38E-03 |
| 32 | GO:0005247: voltage-gated chloride channel activity | 3.38E-03 |
| 33 | GO:0030983: mismatched DNA binding | 3.38E-03 |
| 34 | GO:0004605: phosphatidate cytidylyltransferase activity | 3.38E-03 |
| 35 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 3.38E-03 |
| 36 | GO:0004650: polygalacturonase activity | 3.59E-03 |
| 37 | GO:0004849: uridine kinase activity | 4.06E-03 |
| 38 | GO:0004124: cysteine synthase activity | 4.06E-03 |
| 39 | GO:0008195: phosphatidate phosphatase activity | 4.06E-03 |
| 40 | GO:0043022: ribosome binding | 5.57E-03 |
| 41 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 6.39E-03 |
| 42 | GO:0005375: copper ion transmembrane transporter activity | 6.39E-03 |
| 43 | GO:0004805: trehalose-phosphatase activity | 9.07E-03 |
| 44 | GO:0008559: xenobiotic-transporting ATPase activity | 1.00E-02 |
| 45 | GO:0000976: transcription regulatory region sequence-specific DNA binding | 1.11E-02 |
| 46 | GO:0004022: alcohol dehydrogenase (NAD) activity | 1.21E-02 |
| 47 | GO:0009982: pseudouridine synthase activity | 1.21E-02 |
| 48 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 1.21E-02 |
| 49 | GO:0033612: receptor serine/threonine kinase binding | 1.91E-02 |
| 50 | GO:0008408: 3'-5' exonuclease activity | 1.91E-02 |
| 51 | GO:0003727: single-stranded RNA binding | 2.29E-02 |
| 52 | GO:0047134: protein-disulfide reductase activity | 2.43E-02 |
| 53 | GO:0004812: aminoacyl-tRNA ligase activity | 2.43E-02 |
| 54 | GO:0004871: signal transducer activity | 2.47E-02 |
| 55 | GO:0004527: exonuclease activity | 2.71E-02 |
| 56 | GO:0004791: thioredoxin-disulfide reductase activity | 2.85E-02 |
| 57 | GO:0046983: protein dimerization activity | 2.97E-02 |
| 58 | GO:0016829: lyase activity | 3.00E-02 |
| 59 | GO:0019901: protein kinase binding | 3.00E-02 |
| 60 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 3.15E-02 |
| 61 | GO:0004518: nuclease activity | 3.30E-02 |
| 62 | GO:0000156: phosphorelay response regulator activity | 3.45E-02 |
| 63 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 3.45E-02 |
| 64 | GO:0051015: actin filament binding | 3.45E-02 |
| 65 | GO:0003684: damaged DNA binding | 3.61E-02 |
| 66 | GO:0016791: phosphatase activity | 3.61E-02 |
| 67 | GO:0016413: O-acetyltransferase activity | 3.92E-02 |
| 68 | GO:0030247: polysaccharide binding | 4.59E-02 |
| 69 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 4.59E-02 |
| 70 | GO:0102483: scopolin beta-glucosidase activity | 4.59E-02 |
| 71 | GO:0008236: serine-type peptidase activity | 4.76E-02 |
| 72 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 4.84E-02 |