GO Enrichment Analysis of Co-expressed Genes with
AT5G40950
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0034337: RNA folding | 0.00E+00 |
| 2 | GO:0019685: photosynthesis, dark reaction | 0.00E+00 |
| 3 | GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation | 0.00E+00 |
| 4 | GO:0090470: shoot organ boundary specification | 0.00E+00 |
| 5 | GO:0035970: peptidyl-threonine dephosphorylation | 0.00E+00 |
| 6 | GO:0015995: chlorophyll biosynthetic process | 1.56E-10 |
| 7 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 1.69E-07 |
| 8 | GO:0010207: photosystem II assembly | 2.21E-06 |
| 9 | GO:0015979: photosynthesis | 5.44E-06 |
| 10 | GO:0071482: cellular response to light stimulus | 1.30E-05 |
| 11 | GO:2001141: regulation of RNA biosynthetic process | 3.61E-05 |
| 12 | GO:0009773: photosynthetic electron transport in photosystem I | 4.02E-05 |
| 13 | GO:0055114: oxidation-reduction process | 8.46E-05 |
| 14 | GO:0042254: ribosome biogenesis | 1.33E-04 |
| 15 | GO:0042549: photosystem II stabilization | 1.47E-04 |
| 16 | GO:1904966: positive regulation of vitamin E biosynthetic process | 3.17E-04 |
| 17 | GO:0000481: maturation of 5S rRNA | 3.17E-04 |
| 18 | GO:0015801: aromatic amino acid transport | 3.17E-04 |
| 19 | GO:1904964: positive regulation of phytol biosynthetic process | 3.17E-04 |
| 20 | GO:0043087: regulation of GTPase activity | 3.17E-04 |
| 21 | GO:1902458: positive regulation of stomatal opening | 3.17E-04 |
| 22 | GO:0048564: photosystem I assembly | 3.28E-04 |
| 23 | GO:0006783: heme biosynthetic process | 4.84E-04 |
| 24 | GO:0035304: regulation of protein dephosphorylation | 6.92E-04 |
| 25 | GO:0071457: cellular response to ozone | 6.92E-04 |
| 26 | GO:0010115: regulation of abscisic acid biosynthetic process | 6.92E-04 |
| 27 | GO:0000256: allantoin catabolic process | 6.92E-04 |
| 28 | GO:0006729: tetrahydrobiopterin biosynthetic process | 6.92E-04 |
| 29 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 6.92E-04 |
| 30 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 6.92E-04 |
| 31 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 6.92E-04 |
| 32 | GO:0009658: chloroplast organization | 6.94E-04 |
| 33 | GO:0006352: DNA-templated transcription, initiation | 7.70E-04 |
| 34 | GO:0006094: gluconeogenesis | 9.95E-04 |
| 35 | GO:0010136: ureide catabolic process | 1.12E-03 |
| 36 | GO:0044375: regulation of peroxisome size | 1.12E-03 |
| 37 | GO:0009735: response to cytokinin | 1.26E-03 |
| 38 | GO:0006633: fatty acid biosynthetic process | 1.42E-03 |
| 39 | GO:0006810: transport | 1.47E-03 |
| 40 | GO:0033014: tetrapyrrole biosynthetic process | 1.61E-03 |
| 41 | GO:0010731: protein glutathionylation | 1.61E-03 |
| 42 | GO:0006424: glutamyl-tRNA aminoacylation | 1.61E-03 |
| 43 | GO:1901332: negative regulation of lateral root development | 1.61E-03 |
| 44 | GO:0010371: regulation of gibberellin biosynthetic process | 1.61E-03 |
| 45 | GO:0071484: cellular response to light intensity | 1.61E-03 |
| 46 | GO:0009152: purine ribonucleotide biosynthetic process | 1.61E-03 |
| 47 | GO:0046653: tetrahydrofolate metabolic process | 1.61E-03 |
| 48 | GO:0006631: fatty acid metabolic process | 1.61E-03 |
| 49 | GO:0006145: purine nucleobase catabolic process | 1.61E-03 |
| 50 | GO:0006412: translation | 2.07E-03 |
| 51 | GO:0010021: amylopectin biosynthetic process | 2.16E-03 |
| 52 | GO:0071486: cellular response to high light intensity | 2.16E-03 |
| 53 | GO:0080110: sporopollenin biosynthetic process | 2.76E-03 |
| 54 | GO:0032543: mitochondrial translation | 2.76E-03 |
| 55 | GO:0045038: protein import into chloroplast thylakoid membrane | 2.76E-03 |
| 56 | GO:0031365: N-terminal protein amino acid modification | 2.76E-03 |
| 57 | GO:0009107: lipoate biosynthetic process | 2.76E-03 |
| 58 | GO:0071493: cellular response to UV-B | 2.76E-03 |
| 59 | GO:0000304: response to singlet oxygen | 2.76E-03 |
| 60 | GO:0006096: glycolytic process | 3.23E-03 |
| 61 | GO:0006655: phosphatidylglycerol biosynthetic process | 3.40E-03 |
| 62 | GO:0009920: cell plate formation involved in plant-type cell wall biogenesis | 3.40E-03 |
| 63 | GO:0010189: vitamin E biosynthetic process | 4.10E-03 |
| 64 | GO:1901259: chloroplast rRNA processing | 4.10E-03 |
| 65 | GO:0009645: response to low light intensity stimulus | 4.84E-03 |
| 66 | GO:0006400: tRNA modification | 4.84E-03 |
| 67 | GO:0009395: phospholipid catabolic process | 4.84E-03 |
| 68 | GO:0010027: thylakoid membrane organization | 5.44E-03 |
| 69 | GO:0032508: DNA duplex unwinding | 5.62E-03 |
| 70 | GO:2000070: regulation of response to water deprivation | 5.62E-03 |
| 71 | GO:0016559: peroxisome fission | 5.62E-03 |
| 72 | GO:0005978: glycogen biosynthetic process | 5.62E-03 |
| 73 | GO:0042255: ribosome assembly | 5.62E-03 |
| 74 | GO:0006353: DNA-templated transcription, termination | 5.62E-03 |
| 75 | GO:0006526: arginine biosynthetic process | 6.44E-03 |
| 76 | GO:0015996: chlorophyll catabolic process | 6.44E-03 |
| 77 | GO:0007186: G-protein coupled receptor signaling pathway | 6.44E-03 |
| 78 | GO:0019430: removal of superoxide radicals | 6.44E-03 |
| 79 | GO:0018298: protein-chromophore linkage | 7.10E-03 |
| 80 | GO:0009817: defense response to fungus, incompatible interaction | 7.10E-03 |
| 81 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 7.30E-03 |
| 82 | GO:0010206: photosystem II repair | 7.30E-03 |
| 83 | GO:0006098: pentose-phosphate shunt | 7.30E-03 |
| 84 | GO:0009813: flavonoid biosynthetic process | 7.46E-03 |
| 85 | GO:0005982: starch metabolic process | 8.21E-03 |
| 86 | GO:0010205: photoinhibition | 8.21E-03 |
| 87 | GO:0006779: porphyrin-containing compound biosynthetic process | 8.21E-03 |
| 88 | GO:0007568: aging | 8.22E-03 |
| 89 | GO:0009299: mRNA transcription | 9.15E-03 |
| 90 | GO:0043069: negative regulation of programmed cell death | 9.15E-03 |
| 91 | GO:0006782: protoporphyrinogen IX biosynthetic process | 9.15E-03 |
| 92 | GO:0019684: photosynthesis, light reaction | 1.01E-02 |
| 93 | GO:0008285: negative regulation of cell proliferation | 1.01E-02 |
| 94 | GO:0016024: CDP-diacylglycerol biosynthetic process | 1.11E-02 |
| 95 | GO:0045037: protein import into chloroplast stroma | 1.11E-02 |
| 96 | GO:0009767: photosynthetic electron transport chain | 1.22E-02 |
| 97 | GO:0009266: response to temperature stimulus | 1.33E-02 |
| 98 | GO:0010143: cutin biosynthetic process | 1.33E-02 |
| 99 | GO:0007031: peroxisome organization | 1.44E-02 |
| 100 | GO:0006636: unsaturated fatty acid biosynthetic process | 1.56E-02 |
| 101 | GO:0006833: water transport | 1.56E-02 |
| 102 | GO:0019762: glucosinolate catabolic process | 1.56E-02 |
| 103 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.80E-02 |
| 104 | GO:0010073: meristem maintenance | 1.80E-02 |
| 105 | GO:0007017: microtubule-based process | 1.80E-02 |
| 106 | GO:0031408: oxylipin biosynthetic process | 1.92E-02 |
| 107 | GO:0003333: amino acid transmembrane transport | 1.92E-02 |
| 108 | GO:0048511: rhythmic process | 1.92E-02 |
| 109 | GO:0010431: seed maturation | 1.92E-02 |
| 110 | GO:0061077: chaperone-mediated protein folding | 1.92E-02 |
| 111 | GO:0016226: iron-sulfur cluster assembly | 2.05E-02 |
| 112 | GO:0080092: regulation of pollen tube growth | 2.05E-02 |
| 113 | GO:0009625: response to insect | 2.18E-02 |
| 114 | GO:0010227: floral organ abscission | 2.18E-02 |
| 115 | GO:0010584: pollen exine formation | 2.31E-02 |
| 116 | GO:0034220: ion transmembrane transport | 2.59E-02 |
| 117 | GO:0042335: cuticle development | 2.59E-02 |
| 118 | GO:0006520: cellular amino acid metabolic process | 2.73E-02 |
| 119 | GO:0010182: sugar mediated signaling pathway | 2.73E-02 |
| 120 | GO:0071472: cellular response to salt stress | 2.73E-02 |
| 121 | GO:0032259: methylation | 2.91E-02 |
| 122 | GO:0019252: starch biosynthetic process | 3.02E-02 |
| 123 | GO:0032502: developmental process | 3.32E-02 |
| 124 | GO:0016126: sterol biosynthetic process | 4.12E-02 |
| 125 | GO:0042128: nitrate assimilation | 4.46E-02 |
| 126 | GO:0016311: dephosphorylation | 4.80E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0045550: geranylgeranyl reductase activity | 0.00E+00 |
| 2 | GO:0050613: delta14-sterol reductase activity | 0.00E+00 |
| 3 | GO:0003858: 3-hydroxybutyrate dehydrogenase activity | 0.00E+00 |
| 4 | GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity | 0.00E+00 |
| 5 | GO:0046408: chlorophyll synthetase activity | 0.00E+00 |
| 6 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 7 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 8 | GO:0046863: ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity | 0.00E+00 |
| 9 | GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity | 0.00E+00 |
| 10 | GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity | 0.00E+00 |
| 11 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 12 | GO:0071522: ureidoglycine aminohydrolase activity | 0.00E+00 |
| 13 | GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity | 0.00E+00 |
| 14 | GO:0019144: ADP-sugar diphosphatase activity | 0.00E+00 |
| 15 | GO:0019843: rRNA binding | 1.58E-10 |
| 16 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 4.92E-07 |
| 17 | GO:0005504: fatty acid binding | 1.62E-05 |
| 18 | GO:0016491: oxidoreductase activity | 1.91E-05 |
| 19 | GO:0048038: quinone binding | 3.25E-05 |
| 20 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.45E-05 |
| 21 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 3.61E-05 |
| 22 | GO:0016851: magnesium chelatase activity | 3.61E-05 |
| 23 | GO:0045430: chalcone isomerase activity | 6.44E-05 |
| 24 | GO:0001053: plastid sigma factor activity | 6.44E-05 |
| 25 | GO:0016987: sigma factor activity | 6.44E-05 |
| 26 | GO:0008266: poly(U) RNA binding | 7.46E-05 |
| 27 | GO:0003735: structural constituent of ribosome | 9.86E-05 |
| 28 | GO:0005528: FK506 binding | 1.23E-04 |
| 29 | GO:0004332: fructose-bisphosphate aldolase activity | 1.47E-04 |
| 30 | GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | 3.17E-04 |
| 31 | GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity | 3.17E-04 |
| 32 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 3.17E-04 |
| 33 | GO:0080042: ADP-glucose pyrophosphohydrolase activity | 3.17E-04 |
| 34 | GO:0080132: fatty acid alpha-hydroxylase activity | 3.17E-04 |
| 35 | GO:0010242: oxygen evolving activity | 3.17E-04 |
| 36 | GO:0004325: ferrochelatase activity | 3.17E-04 |
| 37 | GO:0004853: uroporphyrinogen decarboxylase activity | 3.17E-04 |
| 38 | GO:0003844: 1,4-alpha-glucan branching enzyme activity | 6.92E-04 |
| 39 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 6.92E-04 |
| 40 | GO:0042389: omega-3 fatty acid desaturase activity | 6.92E-04 |
| 41 | GO:0080041: ADP-ribose pyrophosphohydrolase activity | 6.92E-04 |
| 42 | GO:0015173: aromatic amino acid transmembrane transporter activity | 6.92E-04 |
| 43 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 1.12E-03 |
| 44 | GO:0030267: glyoxylate reductase (NADP) activity | 1.12E-03 |
| 45 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 1.12E-03 |
| 46 | GO:0008864: formyltetrahydrofolate deformylase activity | 1.12E-03 |
| 47 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 1.12E-03 |
| 48 | GO:0043169: cation binding | 1.12E-03 |
| 49 | GO:0016992: lipoate synthase activity | 1.12E-03 |
| 50 | GO:0008097: 5S rRNA binding | 1.61E-03 |
| 51 | GO:0043495: protein anchor | 2.16E-03 |
| 52 | GO:0005275: amine transmembrane transporter activity | 2.76E-03 |
| 53 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 3.40E-03 |
| 54 | GO:0004784: superoxide dismutase activity | 3.40E-03 |
| 55 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 4.10E-03 |
| 56 | GO:0051920: peroxiredoxin activity | 4.10E-03 |
| 57 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 4.10E-03 |
| 58 | GO:0019899: enzyme binding | 4.84E-03 |
| 59 | GO:0008235: metalloexopeptidase activity | 4.84E-03 |
| 60 | GO:0016209: antioxidant activity | 5.62E-03 |
| 61 | GO:0016168: chlorophyll binding | 5.75E-03 |
| 62 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 6.44E-03 |
| 63 | GO:0071949: FAD binding | 7.30E-03 |
| 64 | GO:0030955: potassium ion binding | 8.21E-03 |
| 65 | GO:0004743: pyruvate kinase activity | 8.21E-03 |
| 66 | GO:0003746: translation elongation factor activity | 9.01E-03 |
| 67 | GO:0030234: enzyme regulator activity | 9.15E-03 |
| 68 | GO:0003993: acid phosphatase activity | 9.42E-03 |
| 69 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 1.01E-02 |
| 70 | GO:0004177: aminopeptidase activity | 1.01E-02 |
| 71 | GO:0031072: heat shock protein binding | 1.22E-02 |
| 72 | GO:0004565: beta-galactosidase activity | 1.22E-02 |
| 73 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.26E-02 |
| 74 | GO:0035091: phosphatidylinositol binding | 1.26E-02 |
| 75 | GO:0051287: NAD binding | 1.41E-02 |
| 76 | GO:0016788: hydrolase activity, acting on ester bonds | 1.47E-02 |
| 77 | GO:0031409: pigment binding | 1.56E-02 |
| 78 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.57E-02 |
| 79 | GO:0005509: calcium ion binding | 1.62E-02 |
| 80 | GO:0051536: iron-sulfur cluster binding | 1.67E-02 |
| 81 | GO:0022891: substrate-specific transmembrane transporter activity | 2.18E-02 |
| 82 | GO:0003727: single-stranded RNA binding | 2.31E-02 |
| 83 | GO:0016787: hydrolase activity | 2.63E-02 |
| 84 | GO:0008080: N-acetyltransferase activity | 2.73E-02 |
| 85 | GO:0050662: coenzyme binding | 2.88E-02 |
| 86 | GO:0004252: serine-type endopeptidase activity | 3.12E-02 |
| 87 | GO:0004518: nuclease activity | 3.32E-02 |
| 88 | GO:0003729: mRNA binding | 3.62E-02 |
| 89 | GO:0005200: structural constituent of cytoskeleton | 3.80E-02 |
| 90 | GO:0015250: water channel activity | 4.12E-02 |
| 91 | GO:0004721: phosphoprotein phosphatase activity | 4.63E-02 |
| 92 | GO:0008236: serine-type peptidase activity | 4.80E-02 |
| 93 | GO:0042802: identical protein binding | 4.90E-02 |