Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G40580

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0071435: potassium ion export0.00E+00
2GO:0001881: receptor recycling0.00E+00
3GO:0046909: intermembrane transport0.00E+00
4GO:0006593: ornithine catabolic process0.00E+00
5GO:0051776: detection of redox state0.00E+00
6GO:0006511: ubiquitin-dependent protein catabolic process1.18E-08
7GO:0019544: arginine catabolic process to glutamate7.75E-05
8GO:0031338: regulation of vesicle fusion7.75E-05
9GO:0006474: N-terminal protein amino acid acetylation7.75E-05
10GO:0006144: purine nucleobase metabolic process7.75E-05
11GO:0071280: cellular response to copper ion7.75E-05
12GO:0019628: urate catabolic process7.75E-05
13GO:0010540: basipetal auxin transport1.60E-04
14GO:0010039: response to iron ion1.81E-04
15GO:0007031: peroxisome organization1.81E-04
16GO:0018345: protein palmitoylation1.85E-04
17GO:0043132: NAD transport1.85E-04
18GO:0071457: cellular response to ozone1.85E-04
19GO:0045454: cell redox homeostasis2.86E-04
20GO:0044375: regulation of peroxisome size3.11E-04
21GO:0090630: activation of GTPase activity3.11E-04
22GO:0018342: protein prenylation3.11E-04
23GO:0008333: endosome to lysosome transport3.11E-04
24GO:0051646: mitochondrion localization3.11E-04
25GO:0009651: response to salt stress3.28E-04
26GO:0048577: negative regulation of short-day photoperiodism, flowering4.49E-04
27GO:0071484: cellular response to light intensity4.49E-04
28GO:0071329: cellular response to sucrose stimulus4.49E-04
29GO:0015858: nucleoside transport4.49E-04
30GO:0009963: positive regulation of flavonoid biosynthetic process4.49E-04
31GO:0080037: negative regulation of cytokinin-activated signaling pathway5.98E-04
32GO:0010109: regulation of photosynthesis5.98E-04
33GO:1903830: magnesium ion transmembrane transport5.98E-04
34GO:0010363: regulation of plant-type hypersensitive response5.98E-04
35GO:0030163: protein catabolic process6.36E-04
36GO:2000762: regulation of phenylpropanoid metabolic process7.57E-04
37GO:0048578: positive regulation of long-day photoperiodism, flowering7.57E-04
38GO:0032957: inositol trisphosphate metabolic process7.57E-04
39GO:0071493: cellular response to UV-B7.57E-04
40GO:0003006: developmental process involved in reproduction9.24E-04
41GO:0006014: D-ribose metabolic process9.24E-04
42GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly9.24E-04
43GO:0006561: proline biosynthetic process9.24E-04
44GO:0010264: myo-inositol hexakisphosphate biosynthetic process9.24E-04
45GO:0042176: regulation of protein catabolic process9.24E-04
46GO:0045040: protein import into mitochondrial outer membrane9.24E-04
47GO:0006120: mitochondrial electron transport, NADH to ubiquinone1.10E-03
48GO:0015693: magnesium ion transport1.29E-03
49GO:0080027: response to herbivore1.29E-03
50GO:0034599: cellular response to oxidative stress1.35E-03
51GO:0006839: mitochondrial transport1.46E-03
52GO:0009061: anaerobic respiration1.48E-03
53GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline1.48E-03
54GO:0030162: regulation of proteolysis1.48E-03
55GO:0006887: exocytosis1.52E-03
56GO:0007186: G-protein coupled receptor signaling pathway1.69E-03
57GO:0019430: removal of superoxide radicals1.69E-03
58GO:0046685: response to arsenic-containing substance1.91E-03
59GO:0000165: MAPK cascade1.99E-03
60GO:0043085: positive regulation of catalytic activity2.61E-03
61GO:0010102: lateral root morphogenesis3.12E-03
62GO:0006807: nitrogen compound metabolic process3.12E-03
63GO:0007034: vacuolar transport3.38E-03
64GO:0010223: secondary shoot formation3.38E-03
65GO:0009934: regulation of meristem structural organization3.38E-03
66GO:0048768: root hair cell tip growth3.38E-03
67GO:0046688: response to copper ion3.66E-03
68GO:0070588: calcium ion transmembrane transport3.66E-03
69GO:0009058: biosynthetic process4.11E-03
70GO:0080147: root hair cell development4.23E-03
71GO:0030433: ubiquitin-dependent ERAD pathway5.13E-03
72GO:0071456: cellular response to hypoxia5.13E-03
73GO:0010227: floral organ abscission5.45E-03
74GO:0016117: carotenoid biosynthetic process6.10E-03
75GO:0042147: retrograde transport, endosome to Golgi6.10E-03
76GO:0010118: stomatal movement6.44E-03
77GO:0055114: oxidation-reduction process6.47E-03
78GO:0006662: glycerol ether metabolic process6.78E-03
79GO:0071472: cellular response to salt stress6.78E-03
80GO:0061025: membrane fusion7.13E-03
81GO:0019252: starch biosynthetic process7.49E-03
82GO:0055072: iron ion homeostasis7.49E-03
83GO:0006623: protein targeting to vacuole7.49E-03
84GO:0045944: positive regulation of transcription from RNA polymerase II promoter7.69E-03
85GO:0010193: response to ozone7.85E-03
86GO:0009723: response to ethylene9.61E-03
87GO:0009615: response to virus1.02E-02
88GO:0009816: defense response to bacterium, incompatible interaction1.06E-02
89GO:0009627: systemic acquired resistance1.10E-02
90GO:0006906: vesicle fusion1.10E-02
91GO:0006950: response to stress1.14E-02
92GO:0009817: defense response to fungus, incompatible interaction1.22E-02
93GO:0048767: root hair elongation1.27E-02
94GO:0006811: ion transport1.31E-02
95GO:0006499: N-terminal protein myristoylation1.31E-02
96GO:0009407: toxin catabolic process1.31E-02
97GO:0010043: response to zinc ion1.36E-02
98GO:0009910: negative regulation of flower development1.36E-02
99GO:0048527: lateral root development1.36E-02
100GO:0009853: photorespiration1.45E-02
101GO:0035195: gene silencing by miRNA1.45E-02
102GO:0030001: metal ion transport1.59E-02
103GO:0009926: auxin polar transport1.73E-02
104GO:0009636: response to toxic substance1.88E-02
105GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.98E-02
106GO:0042538: hyperosmotic salinity response2.04E-02
107GO:0051603: proteolysis involved in cellular protein catabolic process2.19E-02
108GO:0006857: oligopeptide transport2.25E-02
109GO:0048316: seed development2.47E-02
110GO:0009626: plant-type hypersensitive response2.52E-02
111GO:0009624: response to nematode2.75E-02
112GO:0009845: seed germination3.42E-02
113GO:0006413: translational initiation3.86E-02
114GO:0010150: leaf senescence4.06E-02
115GO:0045490: pectin catabolic process4.06E-02
116GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process4.40E-02
117GO:0010468: regulation of gene expression4.60E-02
RankGO TermAdjusted P value
1GO:0044610: FMN transmembrane transporter activity0.00E+00
2GO:0004587: ornithine-oxo-acid transaminase activity0.00E+00
3GO:0004846: urate oxidase activity0.00E+00
4GO:0004298: threonine-type endopeptidase activity7.58E-06
5GO:0015230: FAD transmembrane transporter activity7.75E-05
6GO:0051980: iron-nicotianamine transmembrane transporter activity1.85E-04
7GO:0004596: peptide alpha-N-acetyltransferase activity1.85E-04
8GO:0015228: coenzyme A transmembrane transporter activity1.85E-04
9GO:0051724: NAD transporter activity1.85E-04
10GO:0047325: inositol tetrakisphosphate 1-kinase activity3.11E-04
11GO:0004324: ferredoxin-NADP+ reductase activity3.11E-04
12GO:0052726: inositol-1,3,4-trisphosphate 5-kinase activity3.11E-04
13GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity4.49E-04
14GO:0016004: phospholipase activator activity5.98E-04
15GO:0102490: 8-oxo-dGTP phosphohydrolase activity5.98E-04
16GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor6.36E-04
17GO:0080122: AMP transmembrane transporter activity7.57E-04
18GO:0017137: Rab GTPase binding7.57E-04
19GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity9.24E-04
20GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity9.24E-04
21GO:0036402: proteasome-activating ATPase activity9.24E-04
22GO:0004784: superoxide dismutase activity9.24E-04
23GO:0005347: ATP transmembrane transporter activity1.10E-03
24GO:0004656: procollagen-proline 4-dioxygenase activity1.10E-03
25GO:0015217: ADP transmembrane transporter activity1.10E-03
26GO:0004747: ribokinase activity1.10E-03
27GO:0004714: transmembrane receptor protein tyrosine kinase activity1.48E-03
28GO:0005544: calcium-dependent phospholipid binding1.48E-03
29GO:0008865: fructokinase activity1.48E-03
30GO:0008233: peptidase activity1.51E-03
31GO:0005507: copper ion binding1.62E-03
32GO:0030234: enzyme regulator activity2.37E-03
33GO:0008047: enzyme activator activity2.37E-03
34GO:0031625: ubiquitin protein ligase binding2.44E-03
35GO:0008794: arsenate reductase (glutaredoxin) activity2.61E-03
36GO:0015198: oligopeptide transporter activity2.86E-03
37GO:0015095: magnesium ion transmembrane transporter activity3.12E-03
38GO:0015035: protein disulfide oxidoreductase activity3.22E-03
39GO:0017025: TBP-class protein binding3.66E-03
40GO:0008061: chitin binding3.66E-03
41GO:0051536: iron-sulfur cluster binding4.23E-03
42GO:0031418: L-ascorbic acid binding4.23E-03
43GO:0030170: pyridoxal phosphate binding4.33E-03
44GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding4.44E-03
45GO:0004540: ribonuclease activity4.82E-03
46GO:0047134: protein-disulfide reductase activity6.10E-03
47GO:0003713: transcription coactivator activity6.78E-03
48GO:0046873: metal ion transmembrane transporter activity6.78E-03
49GO:0008080: N-acetyltransferase activity6.78E-03
50GO:0042802: identical protein binding6.82E-03
51GO:0004791: thioredoxin-disulfide reductase activity7.13E-03
52GO:0048038: quinone binding7.85E-03
53GO:0008137: NADH dehydrogenase (ubiquinone) activity7.85E-03
54GO:0016787: hydrolase activity8.77E-03
55GO:0008237: metallopeptidase activity9.36E-03
56GO:0005096: GTPase activator activity1.27E-02
57GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.45E-02
58GO:0000149: SNARE binding1.54E-02
59GO:0051539: 4 iron, 4 sulfur cluster binding1.59E-02
60GO:0009055: electron carrier activity1.64E-02
61GO:0004364: glutathione transferase activity1.68E-02
62GO:0005484: SNAP receptor activity1.73E-02
63GO:0005198: structural molecule activity1.88E-02
64GO:0016887: ATPase activity2.37E-02
65GO:0016874: ligase activity2.64E-02
66GO:0003779: actin binding2.69E-02
67GO:0005524: ATP binding3.52E-02
68GO:0015297: antiporter activity3.93E-02
69GO:0008194: UDP-glycosyltransferase activity4.40E-02
70GO:0003743: translation initiation factor activity4.53E-02
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Gene type



Gene DE type