GO Enrichment Analysis of Co-expressed Genes with
AT5G38520
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 2 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 3 | GO:0019265: glycine biosynthetic process, by transamination of glyoxylate | 0.00E+00 |
| 4 | GO:0046471: phosphatidylglycerol metabolic process | 0.00E+00 |
| 5 | GO:0015979: photosynthesis | 2.51E-09 |
| 6 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.76E-06 |
| 7 | GO:0009645: response to low light intensity stimulus | 2.27E-06 |
| 8 | GO:0032544: plastid translation | 5.05E-06 |
| 9 | GO:0009773: photosynthetic electron transport in photosystem I | 1.64E-05 |
| 10 | GO:0010207: photosystem II assembly | 3.16E-05 |
| 11 | GO:0015995: chlorophyll biosynthetic process | 3.17E-05 |
| 12 | GO:0010600: regulation of auxin biosynthetic process | 3.35E-05 |
| 13 | GO:0018298: protein-chromophore linkage | 3.88E-05 |
| 14 | GO:0006810: transport | 8.83E-05 |
| 15 | GO:0010244: response to low fluence blue light stimulus by blue low-fluence system | 1.10E-04 |
| 16 | GO:0010928: regulation of auxin mediated signaling pathway | 1.85E-04 |
| 17 | GO:0009704: de-etiolation | 1.85E-04 |
| 18 | GO:0019510: S-adenosylhomocysteine catabolic process | 2.16E-04 |
| 19 | GO:0071277: cellular response to calcium ion | 2.16E-04 |
| 20 | GO:0051180: vitamin transport | 2.16E-04 |
| 21 | GO:0030974: thiamine pyrophosphate transport | 2.16E-04 |
| 22 | GO:0046467: membrane lipid biosynthetic process | 2.16E-04 |
| 23 | GO:0071461: cellular response to redox state | 2.16E-04 |
| 24 | GO:0009658: chloroplast organization | 2.48E-04 |
| 25 | GO:0018119: peptidyl-cysteine S-nitrosylation | 4.49E-04 |
| 26 | GO:0015893: drug transport | 4.81E-04 |
| 27 | GO:0080005: photosystem stoichiometry adjustment | 4.81E-04 |
| 28 | GO:0033353: S-adenosylmethionine cycle | 4.81E-04 |
| 29 | GO:0008616: queuosine biosynthetic process | 4.81E-04 |
| 30 | GO:0006729: tetrahydrobiopterin biosynthetic process | 4.81E-04 |
| 31 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 4.81E-04 |
| 32 | GO:0006094: gluconeogenesis | 5.83E-04 |
| 33 | GO:0019253: reductive pentose-phosphate cycle | 6.57E-04 |
| 34 | GO:0006000: fructose metabolic process | 7.83E-04 |
| 35 | GO:0090391: granum assembly | 7.83E-04 |
| 36 | GO:0006518: peptide metabolic process | 7.83E-04 |
| 37 | GO:0044375: regulation of peroxisome size | 7.83E-04 |
| 38 | GO:0006081: cellular aldehyde metabolic process | 7.83E-04 |
| 39 | GO:0006636: unsaturated fatty acid biosynthetic process | 8.16E-04 |
| 40 | GO:0010114: response to red light | 8.91E-04 |
| 41 | GO:0009644: response to high light intensity | 9.81E-04 |
| 42 | GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis | 1.12E-03 |
| 43 | GO:2001141: regulation of RNA biosynthetic process | 1.12E-03 |
| 44 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 1.12E-03 |
| 45 | GO:0019464: glycine decarboxylation via glycine cleavage system | 1.48E-03 |
| 46 | GO:0009765: photosynthesis, light harvesting | 1.48E-03 |
| 47 | GO:0045727: positive regulation of translation | 1.48E-03 |
| 48 | GO:0006546: glycine catabolic process | 1.48E-03 |
| 49 | GO:0055114: oxidation-reduction process | 1.67E-03 |
| 50 | GO:0006465: signal peptide processing | 1.89E-03 |
| 51 | GO:0043097: pyrimidine nucleoside salvage | 1.89E-03 |
| 52 | GO:0035434: copper ion transmembrane transport | 1.89E-03 |
| 53 | GO:0009107: lipoate biosynthetic process | 1.89E-03 |
| 54 | GO:0006206: pyrimidine nucleobase metabolic process | 2.33E-03 |
| 55 | GO:0042549: photosystem II stabilization | 2.33E-03 |
| 56 | GO:0045926: negative regulation of growth | 2.80E-03 |
| 57 | GO:0010189: vitamin E biosynthetic process | 2.80E-03 |
| 58 | GO:0010027: thylakoid membrane organization | 3.12E-03 |
| 59 | GO:0032259: methylation | 3.20E-03 |
| 60 | GO:0010196: nonphotochemical quenching | 3.30E-03 |
| 61 | GO:1900057: positive regulation of leaf senescence | 3.30E-03 |
| 62 | GO:0010161: red light signaling pathway | 3.30E-03 |
| 63 | GO:0009409: response to cold | 3.63E-03 |
| 64 | GO:0042255: ribosome assembly | 3.82E-03 |
| 65 | GO:0006353: DNA-templated transcription, termination | 3.82E-03 |
| 66 | GO:0016559: peroxisome fission | 3.82E-03 |
| 67 | GO:0006002: fructose 6-phosphate metabolic process | 4.38E-03 |
| 68 | GO:0071482: cellular response to light stimulus | 4.38E-03 |
| 69 | GO:0009657: plastid organization | 4.38E-03 |
| 70 | GO:0010218: response to far red light | 4.48E-03 |
| 71 | GO:0090333: regulation of stomatal closure | 4.95E-03 |
| 72 | GO:0006783: heme biosynthetic process | 4.95E-03 |
| 73 | GO:0006754: ATP biosynthetic process | 4.95E-03 |
| 74 | GO:0009637: response to blue light | 5.14E-03 |
| 75 | GO:0010205: photoinhibition | 5.56E-03 |
| 76 | GO:0006779: porphyrin-containing compound biosynthetic process | 5.56E-03 |
| 77 | GO:0006782: protoporphyrinogen IX biosynthetic process | 6.18E-03 |
| 78 | GO:0043069: negative regulation of programmed cell death | 6.18E-03 |
| 79 | GO:0006352: DNA-templated transcription, initiation | 6.84E-03 |
| 80 | GO:0000272: polysaccharide catabolic process | 6.84E-03 |
| 81 | GO:0005986: sucrose biosynthetic process | 8.22E-03 |
| 82 | GO:0009725: response to hormone | 8.22E-03 |
| 83 | GO:0009767: photosynthetic electron transport chain | 8.22E-03 |
| 84 | GO:0009585: red, far-red light phototransduction | 8.94E-03 |
| 85 | GO:0007031: peroxisome organization | 9.69E-03 |
| 86 | GO:0006825: copper ion transport | 1.21E-02 |
| 87 | GO:0031408: oxylipin biosynthetic process | 1.29E-02 |
| 88 | GO:0006396: RNA processing | 1.31E-02 |
| 89 | GO:0010017: red or far-red light signaling pathway | 1.37E-02 |
| 90 | GO:0006730: one-carbon metabolic process | 1.37E-02 |
| 91 | GO:0030433: ubiquitin-dependent ERAD pathway | 1.37E-02 |
| 92 | GO:0009693: ethylene biosynthetic process | 1.46E-02 |
| 93 | GO:0019722: calcium-mediated signaling | 1.55E-02 |
| 94 | GO:0009561: megagametogenesis | 1.55E-02 |
| 95 | GO:0009306: protein secretion | 1.55E-02 |
| 96 | GO:0042631: cellular response to water deprivation | 1.74E-02 |
| 97 | GO:0006606: protein import into nucleus | 1.74E-02 |
| 98 | GO:0009741: response to brassinosteroid | 1.83E-02 |
| 99 | GO:0006814: sodium ion transport | 1.93E-02 |
| 100 | GO:0019252: starch biosynthetic process | 2.02E-02 |
| 101 | GO:0007623: circadian rhythm | 2.21E-02 |
| 102 | GO:0010583: response to cyclopentenone | 2.23E-02 |
| 103 | GO:0032502: developmental process | 2.23E-02 |
| 104 | GO:0030163: protein catabolic process | 2.33E-02 |
| 105 | GO:0042742: defense response to bacterium | 2.36E-02 |
| 106 | GO:0007267: cell-cell signaling | 2.54E-02 |
| 107 | GO:0009735: response to cytokinin | 2.78E-02 |
| 108 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 2.87E-02 |
| 109 | GO:0042128: nitrate assimilation | 2.99E-02 |
| 110 | GO:0010411: xyloglucan metabolic process | 3.10E-02 |
| 111 | GO:0009416: response to light stimulus | 3.11E-02 |
| 112 | GO:0042254: ribosome biogenesis | 3.49E-02 |
| 113 | GO:0007568: aging | 3.70E-02 |
| 114 | GO:0009853: photorespiration | 3.95E-02 |
| 115 | GO:0016051: carbohydrate biosynthetic process | 3.95E-02 |
| 116 | GO:0034599: cellular response to oxidative stress | 4.07E-02 |
| 117 | GO:0006839: mitochondrial transport | 4.33E-02 |
| 118 | GO:0006631: fatty acid metabolic process | 4.46E-02 |
| 119 | GO:0009744: response to sucrose | 4.73E-02 |
| 120 | GO:0000209: protein polyubiquitination | 4.86E-02 |
| 121 | GO:0042546: cell wall biogenesis | 4.86E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046863: ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity | 0.00E+00 |
| 2 | GO:0030504: inorganic diphosphate transmembrane transporter activity | 0.00E+00 |
| 3 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 4 | GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors | 0.00E+00 |
| 5 | GO:0004760: serine-pyruvate transaminase activity | 0.00E+00 |
| 6 | GO:0045550: geranylgeranyl reductase activity | 0.00E+00 |
| 7 | GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity | 0.00E+00 |
| 8 | GO:0050278: sedoheptulose-bisphosphatase activity | 0.00E+00 |
| 9 | GO:0008974: phosphoribulokinase activity | 0.00E+00 |
| 10 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 11 | GO:0050281: serine-glyoxylate transaminase activity | 0.00E+00 |
| 12 | GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity | 0.00E+00 |
| 13 | GO:0031409: pigment binding | 1.09E-06 |
| 14 | GO:0016491: oxidoreductase activity | 1.05E-05 |
| 15 | GO:0016168: chlorophyll binding | 2.55E-05 |
| 16 | GO:0048038: quinone binding | 2.06E-04 |
| 17 | GO:0030794: (S)-coclaurine-N-methyltransferase activity | 2.16E-04 |
| 18 | GO:0090422: thiamine pyrophosphate transporter activity | 2.16E-04 |
| 19 | GO:0004013: adenosylhomocysteinase activity | 2.16E-04 |
| 20 | GO:0080132: fatty acid alpha-hydroxylase activity | 2.16E-04 |
| 21 | GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | 2.16E-04 |
| 22 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 4.81E-04 |
| 23 | GO:0008479: queuine tRNA-ribosyltransferase activity | 4.81E-04 |
| 24 | GO:0018708: thiol S-methyltransferase activity | 4.81E-04 |
| 25 | GO:0008883: glutamyl-tRNA reductase activity | 4.81E-04 |
| 26 | GO:0010297: heteropolysaccharide binding | 4.81E-04 |
| 27 | GO:0031072: heat shock protein binding | 5.83E-04 |
| 28 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 7.83E-04 |
| 29 | GO:0016992: lipoate synthase activity | 7.83E-04 |
| 30 | GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity | 7.83E-04 |
| 31 | GO:0051537: 2 iron, 2 sulfur cluster binding | 9.81E-04 |
| 32 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 1.12E-03 |
| 33 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 1.12E-03 |
| 34 | GO:0003727: single-stranded RNA binding | 1.40E-03 |
| 35 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.48E-03 |
| 36 | GO:0008453: alanine-glyoxylate transaminase activity | 1.48E-03 |
| 37 | GO:0016987: sigma factor activity | 1.48E-03 |
| 38 | GO:0001053: plastid sigma factor activity | 1.48E-03 |
| 39 | GO:0004332: fructose-bisphosphate aldolase activity | 2.33E-03 |
| 40 | GO:0042578: phosphoric ester hydrolase activity | 2.33E-03 |
| 41 | GO:0004029: aldehyde dehydrogenase (NAD) activity | 2.33E-03 |
| 42 | GO:0019843: rRNA binding | 2.67E-03 |
| 43 | GO:0004849: uridine kinase activity | 2.80E-03 |
| 44 | GO:0009055: electron carrier activity | 3.81E-03 |
| 45 | GO:0005375: copper ion transmembrane transporter activity | 4.38E-03 |
| 46 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 4.38E-03 |
| 47 | GO:0071949: FAD binding | 4.95E-03 |
| 48 | GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism | 4.95E-03 |
| 49 | GO:0042802: identical protein binding | 5.46E-03 |
| 50 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 5.56E-03 |
| 51 | GO:0030234: enzyme regulator activity | 6.18E-03 |
| 52 | GO:0008168: methyltransferase activity | 6.68E-03 |
| 53 | GO:0004565: beta-galactosidase activity | 8.22E-03 |
| 54 | GO:0005315: inorganic phosphate transmembrane transporter activity | 8.22E-03 |
| 55 | GO:0003690: double-stranded DNA binding | 9.26E-03 |
| 56 | GO:0051082: unfolded protein binding | 1.28E-02 |
| 57 | GO:0008514: organic anion transmembrane transporter activity | 1.55E-02 |
| 58 | GO:0008080: N-acetyltransferase activity | 1.83E-02 |
| 59 | GO:0008565: protein transporter activity | 1.92E-02 |
| 60 | GO:0050662: coenzyme binding | 1.93E-02 |
| 61 | GO:0004872: receptor activity | 2.02E-02 |
| 62 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 2.12E-02 |
| 63 | GO:0003735: structural constituent of ribosome | 2.29E-02 |
| 64 | GO:0016791: phosphatase activity | 2.44E-02 |
| 65 | GO:0004721: phosphoprotein phosphatase activity | 3.10E-02 |
| 66 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 3.10E-02 |
| 67 | GO:0004222: metalloendopeptidase activity | 3.58E-02 |
| 68 | GO:0030145: manganese ion binding | 3.70E-02 |
| 69 | GO:0003746: translation elongation factor activity | 3.95E-02 |
| 70 | GO:0003993: acid phosphatase activity | 4.07E-02 |
| 71 | GO:0008233: peptidase activity | 4.16E-02 |
| 72 | GO:0050661: NADP binding | 4.33E-02 |
| 73 | GO:0005515: protein binding | 4.95E-02 |
| 74 | GO:0043621: protein self-association | 5.00E-02 |