Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G27290

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0046471: phosphatidylglycerol metabolic process0.00E+00
2GO:0034337: RNA folding0.00E+00
3GO:1901918: negative regulation of exoribonuclease activity0.00E+00
4GO:0098586: cellular response to virus0.00E+00
5GO:0033494: ferulate metabolic process0.00E+00
6GO:0017009: protein-phycocyanobilin linkage0.00E+00
7GO:2000042: negative regulation of double-strand break repair via homologous recombination0.00E+00
8GO:0005996: monosaccharide metabolic process0.00E+00
9GO:0008298: intracellular mRNA localization0.00E+00
10GO:0015995: chlorophyll biosynthetic process4.41E-08
11GO:0055114: oxidation-reduction process5.25E-08
12GO:0006094: gluconeogenesis1.15E-07
13GO:0015979: photosynthesis4.70E-06
14GO:0010207: photosystem II assembly7.14E-06
15GO:0030388: fructose 1,6-bisphosphate metabolic process9.20E-06
16GO:0006000: fructose metabolic process3.16E-05
17GO:0009658: chloroplast organization8.09E-05
18GO:0009773: photosynthetic electron transport in photosystem I9.21E-05
19GO:0010600: regulation of auxin biosynthetic process1.19E-04
20GO:0019253: reductive pentose-phosphate cycle1.65E-04
21GO:0006636: unsaturated fatty acid biosynthetic process2.28E-04
22GO:0006810: transport2.38E-04
23GO:0009735: response to cytokinin3.15E-04
24GO:0032259: methylation3.41E-04
25GO:0010244: response to low fluence blue light stimulus by blue low-fluence system3.49E-04
26GO:0043686: co-translational protein modification4.56E-04
27GO:0043087: regulation of GTPase activity4.56E-04
28GO:0071461: cellular response to redox state4.56E-04
29GO:0071277: cellular response to calcium ion4.56E-04
30GO:0046167: glycerol-3-phosphate biosynthetic process4.56E-04
31GO:0043007: maintenance of rDNA4.56E-04
32GO:1902458: positive regulation of stomatal opening4.56E-04
33GO:0019510: S-adenosylhomocysteine catabolic process4.56E-04
34GO:0051180: vitamin transport4.56E-04
35GO:0015969: guanosine tetraphosphate metabolic process4.56E-04
36GO:0030974: thiamine pyrophosphate transport4.56E-04
37GO:0046467: membrane lipid biosynthetic process4.56E-04
38GO:1904966: positive regulation of vitamin E biosynthetic process4.56E-04
39GO:0043953: protein transport by the Tat complex4.56E-04
40GO:0000481: maturation of 5S rRNA4.56E-04
41GO:1904964: positive regulation of phytol biosynthetic process4.56E-04
42GO:0010426: DNA methylation on cytosine within a CHH sequence4.56E-04
43GO:0065002: intracellular protein transmembrane transport4.56E-04
44GO:0019722: calcium-mediated signaling4.85E-04
45GO:0016559: peroxisome fission5.61E-04
46GO:0010928: regulation of auxin mediated signaling pathway5.61E-04
47GO:0009704: de-etiolation5.61E-04
48GO:0006002: fructose 6-phosphate metabolic process6.84E-04
49GO:0009821: alkaloid biosynthetic process8.19E-04
50GO:0006098: pentose-phosphate shunt8.19E-04
51GO:0006754: ATP biosynthetic process8.19E-04
52GO:0008616: queuosine biosynthetic process9.85E-04
53GO:1903426: regulation of reactive oxygen species biosynthetic process9.85E-04
54GO:0015790: UDP-xylose transport9.85E-04
55GO:0080005: photosystem stoichiometry adjustment9.85E-04
56GO:0046741: transport of virus in host, tissue to tissue9.85E-04
57GO:0033353: S-adenosylmethionine cycle9.85E-04
58GO:0010541: acropetal auxin transport9.85E-04
59GO:1902326: positive regulation of chlorophyll biosynthetic process9.85E-04
60GO:0015893: drug transport9.85E-04
61GO:0006650: glycerophospholipid metabolic process9.85E-04
62GO:0007267: cell-cell signaling1.17E-03
63GO:0018119: peptidyl-cysteine S-nitrosylation1.29E-03
64GO:0010027: thylakoid membrane organization1.36E-03
65GO:0006081: cellular aldehyde metabolic process1.60E-03
66GO:0046621: negative regulation of organ growth1.60E-03
67GO:0046168: glycerol-3-phosphate catabolic process1.60E-03
68GO:0010160: formation of animal organ boundary1.60E-03
69GO:0044375: regulation of peroxisome size1.60E-03
70GO:0005986: sucrose biosynthetic process1.68E-03
71GO:0010020: chloroplast fission1.90E-03
72GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly2.32E-03
73GO:0006020: inositol metabolic process2.32E-03
74GO:0071484: cellular response to light intensity2.32E-03
75GO:0009152: purine ribonucleotide biosynthetic process2.32E-03
76GO:0046653: tetrahydrofolate metabolic process2.32E-03
77GO:0033014: tetrapyrrole biosynthetic process2.32E-03
78GO:0043481: anthocyanin accumulation in tissues in response to UV light2.32E-03
79GO:0010731: protein glutathionylation2.32E-03
80GO:0006072: glycerol-3-phosphate metabolic process2.32E-03
81GO:0043572: plastid fission2.32E-03
82GO:0042823: pyridoxal phosphate biosynthetic process2.32E-03
83GO:2001141: regulation of RNA biosynthetic process2.32E-03
84GO:0009058: biosynthetic process2.51E-03
85GO:0009853: photorespiration2.58E-03
86GO:0044550: secondary metabolite biosynthetic process3.06E-03
87GO:0015689: molybdate ion transport3.12E-03
88GO:0019464: glycine decarboxylation via glycine cleavage system3.12E-03
89GO:0045727: positive regulation of translation3.12E-03
90GO:0015994: chlorophyll metabolic process3.12E-03
91GO:0006546: glycine catabolic process3.12E-03
92GO:0006021: inositol biosynthetic process3.12E-03
93GO:0019748: secondary metabolic process3.50E-03
94GO:0043097: pyrimidine nucleoside salvage4.00E-03
95GO:0031365: N-terminal protein amino acid modification4.00E-03
96GO:0009107: lipoate biosynthetic process4.00E-03
97GO:0006465: signal peptide processing4.00E-03
98GO:0006564: L-serine biosynthetic process4.00E-03
99GO:0045038: protein import into chloroplast thylakoid membrane4.00E-03
100GO:0046855: inositol phosphate dephosphorylation4.95E-03
101GO:0042549: photosystem II stabilization4.95E-03
102GO:0060918: auxin transport4.95E-03
103GO:1902456: regulation of stomatal opening4.95E-03
104GO:0009920: cell plate formation involved in plant-type cell wall biogenesis4.95E-03
105GO:0006206: pyrimidine nucleobase metabolic process4.95E-03
106GO:0009585: red, far-red light phototransduction5.23E-03
107GO:0006520: cellular amino acid metabolic process5.25E-03
108GO:0009854: oxidative photosynthetic carbon pathway5.98E-03
109GO:0010019: chloroplast-nucleus signaling pathway5.98E-03
110GO:0045926: negative regulation of growth5.98E-03
111GO:0017148: negative regulation of translation5.98E-03
112GO:0010189: vitamin E biosynthetic process5.98E-03
113GO:1901259: chloroplast rRNA processing5.98E-03
114GO:0000054: ribosomal subunit export from nucleus5.98E-03
115GO:0019252: starch biosynthetic process6.06E-03
116GO:0006096: glycolytic process6.48E-03
117GO:0032502: developmental process6.93E-03
118GO:0010161: red light signaling pathway7.07E-03
119GO:0009772: photosynthetic electron transport in photosystem II7.07E-03
120GO:1900056: negative regulation of leaf senescence7.07E-03
121GO:1900057: positive regulation of leaf senescence7.07E-03
122GO:0048437: floral organ development7.07E-03
123GO:0006400: tRNA modification7.07E-03
124GO:0009231: riboflavin biosynthetic process8.23E-03
125GO:0007155: cell adhesion8.23E-03
126GO:0009690: cytokinin metabolic process8.23E-03
127GO:0032508: DNA duplex unwinding8.23E-03
128GO:0042255: ribosome assembly8.23E-03
129GO:2000070: regulation of response to water deprivation8.23E-03
130GO:0006353: DNA-templated transcription, termination8.23E-03
131GO:0009932: cell tip growth9.45E-03
132GO:0071482: cellular response to light stimulus9.45E-03
133GO:0015996: chlorophyll catabolic process9.45E-03
134GO:0007186: G-protein coupled receptor signaling pathway9.45E-03
135GO:0006526: arginine biosynthetic process9.45E-03
136GO:0032544: plastid translation9.45E-03
137GO:0009657: plastid organization9.45E-03
138GO:0051865: protein autoubiquitination1.07E-02
139GO:0090305: nucleic acid phosphodiester bond hydrolysis1.07E-02
140GO:0010206: photosystem II repair1.07E-02
141GO:0090333: regulation of stomatal closure1.07E-02
142GO:0006783: heme biosynthetic process1.07E-02
143GO:0010411: xyloglucan metabolic process1.11E-02
144GO:0010205: photoinhibition1.21E-02
145GO:0006779: porphyrin-containing compound biosynthetic process1.21E-02
146GO:0010380: regulation of chlorophyll biosynthetic process1.21E-02
147GO:0043069: negative regulation of programmed cell death1.35E-02
148GO:0009641: shade avoidance1.35E-02
149GO:0006535: cysteine biosynthetic process from serine1.35E-02
150GO:0019684: photosynthesis, light reaction1.49E-02
151GO:0043085: positive regulation of catalytic activity1.49E-02
152GO:0006352: DNA-templated transcription, initiation1.49E-02
153GO:0000272: polysaccharide catabolic process1.49E-02
154GO:0006415: translational termination1.49E-02
155GO:0008361: regulation of cell size1.64E-02
156GO:0006790: sulfur compound metabolic process1.64E-02
157GO:0034599: cellular response to oxidative stress1.64E-02
158GO:0045037: protein import into chloroplast stroma1.64E-02
159GO:0007623: circadian rhythm1.65E-02
160GO:0018107: peptidyl-threonine phosphorylation1.80E-02
161GO:0009718: anthocyanin-containing compound biosynthetic process1.80E-02
162GO:0009725: response to hormone1.80E-02
163GO:0009767: photosynthetic electron transport chain1.80E-02
164GO:0010540: basipetal auxin transport1.96E-02
165GO:0009266: response to temperature stimulus1.96E-02
166GO:0034605: cellular response to heat1.96E-02
167GO:0010143: cutin biosynthetic process1.96E-02
168GO:0010223: secondary shoot formation1.96E-02
169GO:0042546: cell wall biogenesis2.10E-02
170GO:0046854: phosphatidylinositol phosphorylation2.13E-02
171GO:0007031: peroxisome organization2.13E-02
172GO:0042343: indole glucosinolate metabolic process2.13E-02
173GO:0005985: sucrose metabolic process2.13E-02
174GO:0009636: response to toxic substance2.27E-02
175GO:0009833: plant-type primary cell wall biogenesis2.30E-02
176GO:0006833: water transport2.30E-02
177GO:0019762: glucosinolate catabolic process2.30E-02
178GO:0019344: cysteine biosynthetic process2.48E-02
179GO:0051302: regulation of cell division2.66E-02
180GO:0048511: rhythmic process2.84E-02
181GO:0098542: defense response to other organism2.84E-02
182GO:0061077: chaperone-mediated protein folding2.84E-02
183GO:0031408: oxylipin biosynthetic process2.84E-02
184GO:0006306: DNA methylation2.84E-02
185GO:0006857: oligopeptide transport2.92E-02
186GO:0006730: one-carbon metabolic process3.03E-02
187GO:0016226: iron-sulfur cluster assembly3.03E-02
188GO:0010017: red or far-red light signaling pathway3.03E-02
189GO:0030433: ubiquitin-dependent ERAD pathway3.03E-02
190GO:0009693: ethylene biosynthetic process3.23E-02
191GO:0006817: phosphate ion transport3.42E-02
192GO:0048443: stamen development3.42E-02
193GO:0009306: protein secretion3.42E-02
194GO:0009561: megagametogenesis3.42E-02
195GO:0006606: protein import into nucleus3.83E-02
196GO:0042631: cellular response to water deprivation3.83E-02
197GO:0034220: ion transmembrane transport3.83E-02
198GO:0005975: carbohydrate metabolic process3.84E-02
199GO:0010182: sugar mediated signaling pathway4.04E-02
200GO:0009741: response to brassinosteroid4.04E-02
201GO:0009958: positive gravitropism4.04E-02
202GO:0006662: glycerol ether metabolic process4.04E-02
203GO:0009742: brassinosteroid mediated signaling pathway4.11E-02
204GO:0007059: chromosome segregation4.25E-02
205GO:0015986: ATP synthesis coupled proton transport4.25E-02
206GO:0008654: phospholipid biosynthetic process4.47E-02
207GO:0071555: cell wall organization4.64E-02
208GO:0000302: response to reactive oxygen species4.69E-02
209GO:0007264: small GTPase mediated signal transduction4.92E-02
210GO:0010583: response to cyclopentenone4.92E-02
RankGO TermAdjusted P value
1GO:0008942: nitrite reductase [NAD(P)H] activity0.00E+00
2GO:0102193: protein-ribulosamine 3-kinase activity0.00E+00
3GO:0035798: 2-alkenal reductase (NADP+) activity0.00E+00
4GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity0.00E+00
5GO:0030794: (S)-coclaurine-N-methyltransferase activity0.00E+00
6GO:0046406: magnesium protoporphyrin IX methyltransferase activity0.00E+00
7GO:0036361: racemase activity, acting on amino acids and derivatives0.00E+00
8GO:0045550: geranylgeranyl reductase activity0.00E+00
9GO:0009673: low-affinity phosphate transmembrane transporter activity0.00E+00
10GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity0.00E+00
11GO:0050278: sedoheptulose-bisphosphatase activity0.00E+00
12GO:0008974: phosphoribulokinase activity0.00E+00
13GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives0.00E+00
14GO:0033840: NDP-glucose-starch glucosyltransferase activity0.00E+00
15GO:0016491: oxidoreductase activity1.62E-06
16GO:0004332: fructose-bisphosphate aldolase activity5.56E-06
17GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity9.20E-06
18GO:0018708: thiol S-methyltransferase activity9.20E-06
19GO:0016851: magnesium chelatase activity6.81E-05
20GO:0051287: NAD binding1.23E-04
21GO:0031072: heat shock protein binding1.38E-04
22GO:0008168: methyltransferase activity3.95E-04
23GO:0019899: enzyme binding4.49E-04
24GO:0010313: phytochrome binding4.56E-04
25GO:0035671: enone reductase activity4.56E-04
26GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity4.56E-04
27GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity4.56E-04
28GO:0046906: tetrapyrrole binding4.56E-04
29GO:0090422: thiamine pyrophosphate transporter activity4.56E-04
30GO:0004013: adenosylhomocysteinase activity4.56E-04
31GO:0016618: hydroxypyruvate reductase activity4.56E-04
32GO:0080132: fatty acid alpha-hydroxylase activity4.56E-04
33GO:0004325: ferrochelatase activity4.56E-04
34GO:0042586: peptide deformylase activity4.56E-04
35GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water6.84E-04
36GO:0048038: quinone binding8.56E-04
37GO:0016844: strictosidine synthase activity9.64E-04
38GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity9.64E-04
39GO:0047746: chlorophyllase activity9.85E-04
40GO:0042389: omega-3 fatty acid desaturase activity9.85E-04
41GO:0010297: heteropolysaccharide binding9.85E-04
42GO:0009977: proton motive force dependent protein transmembrane transporter activity9.85E-04
43GO:0004617: phosphoglycerate dehydrogenase activity9.85E-04
44GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity9.85E-04
45GO:0004047: aminomethyltransferase activity9.85E-04
46GO:0052832: inositol monophosphate 3-phosphatase activity9.85E-04
47GO:0008479: queuine tRNA-ribosyltransferase activity9.85E-04
48GO:0004081: bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity9.85E-04
49GO:0034432: bis(5'-adenosyl)-pentaphosphatase activity9.85E-04
50GO:0043024: ribosomal small subunit binding9.85E-04
51GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity9.85E-04
52GO:0008934: inositol monophosphate 1-phosphatase activity9.85E-04
53GO:0008728: GTP diphosphokinase activity9.85E-04
54GO:0052833: inositol monophosphate 4-phosphatase activity9.85E-04
55GO:0005464: UDP-xylose transmembrane transporter activity9.85E-04
56GO:0050017: L-3-cyanoalanine synthase activity9.85E-04
57GO:0042802: identical protein binding1.27E-03
58GO:0003935: GTP cyclohydrolase II activity1.60E-03
59GO:0016742: hydroxymethyl-, formyl- and related transferase activity1.60E-03
60GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity1.60E-03
61GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity1.60E-03
62GO:0008864: formyltetrahydrofolate deformylase activity1.60E-03
63GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor1.60E-03
64GO:0010277: chlorophyllide a oxygenase [overall] activity1.60E-03
65GO:0004373: glycogen (starch) synthase activity1.60E-03
66GO:0050734: hydroxycinnamoyltransferase activity1.60E-03
67GO:0016992: lipoate synthase activity1.60E-03
68GO:0030267: glyoxylate reductase (NADP) activity1.60E-03
69GO:0004565: beta-galactosidase activity1.68E-03
70GO:0019843: rRNA binding2.31E-03
71GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor2.32E-03
72GO:0004375: glycine dehydrogenase (decarboxylating) activity2.32E-03
73GO:0048027: mRNA 5'-UTR binding2.32E-03
74GO:0005528: FK506 binding2.63E-03
75GO:0001053: plastid sigma factor activity3.12E-03
76GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor3.12E-03
77GO:0016987: sigma factor activity3.12E-03
78GO:0009011: starch synthase activity3.12E-03
79GO:0015098: molybdate ion transmembrane transporter activity3.12E-03
80GO:0043495: protein anchor3.12E-03
81GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen4.00E-03
82GO:0003727: single-stranded RNA binding4.15E-03
83GO:0003755: peptidyl-prolyl cis-trans isomerase activity4.35E-03
84GO:0004029: aldehyde dehydrogenase (NAD) activity4.95E-03
85GO:0035673: oligopeptide transmembrane transporter activity4.95E-03
86GO:0042578: phosphoric ester hydrolase activity4.95E-03
87GO:0008080: N-acetyltransferase activity5.25E-03
88GO:0004124: cysteine synthase activity5.98E-03
89GO:0004849: uridine kinase activity5.98E-03
90GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity5.98E-03
91GO:0003886: DNA (cytosine-5-)-methyltransferase activity5.98E-03
92GO:0005506: iron ion binding6.12E-03
93GO:0016762: xyloglucan:xyloglucosyl transferase activity6.49E-03
94GO:0004518: nuclease activity6.93E-03
95GO:0051082: unfolded protein binding8.21E-03
96GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism1.07E-02
97GO:0071949: FAD binding1.07E-02
98GO:0016798: hydrolase activity, acting on glycosyl bonds1.11E-02
99GO:0016887: ATPase activity1.13E-02
100GO:0030234: enzyme regulator activity1.35E-02
101GO:0004871: signal transducer activity1.44E-02
102GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen1.51E-02
103GO:0015198: oligopeptide transporter activity1.64E-02
104GO:0010329: auxin efflux transmembrane transporter activity1.80E-02
105GO:0005315: inorganic phosphate transmembrane transporter activity1.80E-02
106GO:0004364: glutathione transferase activity1.94E-02
107GO:0031624: ubiquitin conjugating enzyme binding1.96E-02
108GO:0004185: serine-type carboxypeptidase activity2.02E-02
109GO:0003824: catalytic activity2.11E-02
110GO:0051537: 2 iron, 2 sulfur cluster binding2.19E-02
111GO:0035091: phosphatidylinositol binding2.19E-02
112GO:0051536: iron-sulfur cluster binding2.48E-02
113GO:0003690: double-stranded DNA binding2.83E-02
114GO:0016787: hydrolase activity3.14E-02
115GO:0016760: cellulose synthase (UDP-forming) activity3.23E-02
116GO:0022891: substrate-specific transmembrane transporter activity3.23E-02
117GO:0005525: GTP binding3.31E-02
118GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups3.33E-02
119GO:0047134: protein-disulfide reductase activity3.63E-02
120GO:0003729: mRNA binding3.71E-02
121GO:0046933: proton-transporting ATP synthase activity, rotational mechanism4.04E-02
122GO:0052689: carboxylic ester hydrolase activity4.22E-02
123GO:0004791: thioredoxin-disulfide reductase activity4.25E-02
124GO:0050662: coenzyme binding4.25E-02
125GO:0004872: receptor activity4.47E-02
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Gene type



Gene DE type