Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G25440

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0072660: maintenance of protein location in plasma membrane0.00E+00
2GO:0071327: cellular response to trehalose stimulus0.00E+00
3GO:0043048: dolichyl monophosphate biosynthetic process0.00E+00
4GO:0098755: maintenance of seed dormancy by absisic acid0.00E+00
5GO:0015690: aluminum cation transport0.00E+00
6GO:1900367: positive regulation of defense response to insect0.00E+00
7GO:0002376: immune system process0.00E+00
8GO:0033587: shikimate biosynthetic process0.00E+00
9GO:0010324: membrane invagination0.00E+00
10GO:0010200: response to chitin4.72E-15
11GO:0031348: negative regulation of defense response1.71E-07
12GO:0060548: negative regulation of cell death4.05E-07
13GO:0019725: cellular homeostasis3.96E-06
14GO:0009751: response to salicylic acid8.81E-06
15GO:0009266: response to temperature stimulus6.35E-05
16GO:0009737: response to abscisic acid8.43E-05
17GO:0010225: response to UV-C8.98E-05
18GO:0045927: positive regulation of growth8.98E-05
19GO:0009759: indole glucosinolate biosynthetic process1.30E-04
20GO:1900056: negative regulation of leaf senescence2.33E-04
21GO:0006952: defense response2.62E-04
22GO:0048482: plant ovule morphogenesis2.94E-04
23GO:0051938: L-glutamate import2.94E-04
24GO:0051245: negative regulation of cellular defense response2.94E-04
25GO:0015969: guanosine tetraphosphate metabolic process2.94E-04
26GO:0009609: response to symbiotic bacterium2.94E-04
27GO:0010421: hydrogen peroxide-mediated programmed cell death2.94E-04
28GO:0006562: proline catabolic process2.94E-04
29GO:0010482: regulation of epidermal cell division2.94E-04
30GO:1901183: positive regulation of camalexin biosynthetic process2.94E-04
31GO:0009270: response to humidity2.94E-04
32GO:0050691: regulation of defense response to virus by host2.94E-04
33GO:2000031: regulation of salicylic acid mediated signaling pathway3.62E-04
34GO:0042742: defense response to bacterium4.45E-04
35GO:0009626: plant-type hypersensitive response5.07E-04
36GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway5.16E-04
37GO:0080151: positive regulation of salicylic acid mediated signaling pathway6.45E-04
38GO:0010133: proline catabolic process to glutamate6.45E-04
39GO:0015802: basic amino acid transport6.45E-04
40GO:0010618: aerenchyma formation6.45E-04
41GO:0043091: L-arginine import6.45E-04
42GO:0008361: regulation of cell size7.93E-04
43GO:0046777: protein autophosphorylation9.40E-04
44GO:0007034: vacuolar transport1.01E-03
45GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process1.04E-03
46GO:0009653: anatomical structure morphogenesis1.04E-03
47GO:1900140: regulation of seedling development1.04E-03
48GO:0045793: positive regulation of cell size1.04E-03
49GO:0072661: protein targeting to plasma membrane1.04E-03
50GO:0010186: positive regulation of cellular defense response1.04E-03
51GO:0046621: negative regulation of organ growth1.04E-03
52GO:0009863: salicylic acid mediated signaling pathway1.39E-03
53GO:0010150: leaf senescence1.39E-03
54GO:0048194: Golgi vesicle budding1.50E-03
55GO:0034219: carbohydrate transmembrane transport1.50E-03
56GO:0070301: cellular response to hydrogen peroxide1.50E-03
57GO:0043207: response to external biotic stimulus1.50E-03
58GO:0072583: clathrin-dependent endocytosis1.50E-03
59GO:0010148: transpiration1.50E-03
60GO:0006537: glutamate biosynthetic process1.50E-03
61GO:0002679: respiratory burst involved in defense response1.50E-03
62GO:0006612: protein targeting to membrane1.50E-03
63GO:0015696: ammonium transport1.50E-03
64GO:0051289: protein homotetramerization1.50E-03
65GO:0000187: activation of MAPK activity1.50E-03
66GO:0051707: response to other organism1.56E-03
67GO:0071456: cellular response to hypoxia1.83E-03
68GO:0031347: regulation of defense response1.98E-03
69GO:0006468: protein phosphorylation1.99E-03
70GO:0009625: response to insect2.00E-03
71GO:0046345: abscisic acid catabolic process2.01E-03
72GO:0010483: pollen tube reception2.01E-03
73GO:0009652: thigmotropism2.01E-03
74GO:0045088: regulation of innate immune response2.01E-03
75GO:1902584: positive regulation of response to water deprivation2.01E-03
76GO:0072488: ammonium transmembrane transport2.01E-03
77GO:0010363: regulation of plant-type hypersensitive response2.01E-03
78GO:0051567: histone H3-K9 methylation2.01E-03
79GO:1901002: positive regulation of response to salt stress2.01E-03
80GO:2000038: regulation of stomatal complex development2.01E-03
81GO:0080142: regulation of salicylic acid biosynthetic process2.01E-03
82GO:1901141: regulation of lignin biosynthetic process2.01E-03
83GO:0009697: salicylic acid biosynthetic process2.56E-03
84GO:0007165: signal transduction2.60E-03
85GO:0009646: response to absence of light2.94E-03
86GO:0048317: seed morphogenesis3.16E-03
87GO:0010942: positive regulation of cell death3.16E-03
88GO:0009620: response to fungus3.17E-03
89GO:0010193: response to ozone3.38E-03
90GO:0018105: peptidyl-serine phosphorylation3.70E-03
91GO:2000037: regulation of stomatal complex patterning3.81E-03
92GO:0010310: regulation of hydrogen peroxide metabolic process3.81E-03
93GO:0034389: lipid particle organization3.81E-03
94GO:0009094: L-phenylalanine biosynthetic process3.81E-03
95GO:0042372: phylloquinone biosynthetic process3.81E-03
96GO:0045926: negative regulation of growth3.81E-03
97GO:0009612: response to mechanical stimulus3.81E-03
98GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway4.49E-03
99GO:0010161: red light signaling pathway4.49E-03
100GO:0009610: response to symbiotic fungus4.49E-03
101GO:0043090: amino acid import4.49E-03
102GO:0071446: cellular response to salicylic acid stimulus4.49E-03
103GO:0080186: developmental vegetative growth4.49E-03
104GO:0009414: response to water deprivation4.68E-03
105GO:0009611: response to wounding4.71E-03
106GO:0001666: response to hypoxia4.88E-03
107GO:0035556: intracellular signal transduction4.98E-03
108GO:0045892: negative regulation of transcription, DNA-templated5.07E-03
109GO:0035265: organ growth5.21E-03
110GO:0032875: regulation of DNA endoreduplication5.21E-03
111GO:0010099: regulation of photomorphogenesis5.98E-03
112GO:0010120: camalexin biosynthetic process5.98E-03
113GO:0030968: endoplasmic reticulum unfolded protein response5.98E-03
114GO:0007275: multicellular organism development6.55E-03
115GO:0009835: fruit ripening6.77E-03
116GO:0046685: response to arsenic-containing substance6.77E-03
117GO:0006098: pentose-phosphate shunt6.77E-03
118GO:0051865: protein autoubiquitination6.77E-03
119GO:0009056: catabolic process6.77E-03
120GO:0009753: response to jasmonic acid7.58E-03
121GO:1900426: positive regulation of defense response to bacterium7.60E-03
122GO:0006470: protein dephosphorylation8.48E-03
123GO:0043069: negative regulation of programmed cell death8.48E-03
124GO:0009617: response to bacterium8.96E-03
125GO:0009682: induced systemic resistance9.38E-03
126GO:0052544: defense response by callose deposition in cell wall9.38E-03
127GO:0019684: photosynthesis, light reaction9.38E-03
128GO:0048765: root hair cell differentiation9.38E-03
129GO:0006887: exocytosis9.61E-03
130GO:0012501: programmed cell death1.03E-02
131GO:0002213: defense response to insect1.03E-02
132GO:0015706: nitrate transport1.03E-02
133GO:0010105: negative regulation of ethylene-activated signaling pathway1.03E-02
134GO:0055046: microgametogenesis1.13E-02
135GO:0010229: inflorescence development1.13E-02
136GO:0002237: response to molecule of bacterial origin1.23E-02
137GO:0009887: animal organ morphogenesis1.23E-02
138GO:0006351: transcription, DNA-templated1.32E-02
139GO:0010167: response to nitrate1.33E-02
140GO:0070588: calcium ion transmembrane transport1.33E-02
141GO:0046854: phosphatidylinositol phosphorylation1.33E-02
142GO:0009809: lignin biosynthetic process1.41E-02
143GO:0009116: nucleoside metabolic process1.55E-02
144GO:0005992: trehalose biosynthetic process1.55E-02
145GO:0006979: response to oxidative stress1.57E-02
146GO:0080167: response to karrikin1.64E-02
147GO:0010026: trichome differentiation1.66E-02
148GO:0019915: lipid storage1.78E-02
149GO:0048278: vesicle docking1.78E-02
150GO:0003333: amino acid transmembrane transport1.78E-02
151GO:0035428: hexose transmembrane transport1.90E-02
152GO:0009814: defense response, incompatible interaction1.90E-02
153GO:0016226: iron-sulfur cluster assembly1.90E-02
154GO:2000022: regulation of jasmonic acid mediated signaling pathway1.90E-02
155GO:0009624: response to nematode2.01E-02
156GO:0010227: floral organ abscission2.02E-02
157GO:0009693: ethylene biosynthetic process2.02E-02
158GO:0009742: brassinosteroid mediated signaling pathway2.13E-02
159GO:0009789: positive regulation of abscisic acid-activated signaling pathway2.27E-02
160GO:0070417: cellular response to cold2.27E-02
161GO:0010118: stomatal movement2.40E-02
162GO:0009741: response to brassinosteroid2.53E-02
163GO:0046323: glucose import2.53E-02
164GO:0061025: membrane fusion2.66E-02
165GO:0008654: phospholipid biosynthetic process2.80E-02
166GO:0016032: viral process3.08E-02
167GO:0019760: glucosinolate metabolic process3.37E-02
168GO:0006904: vesicle docking involved in exocytosis3.51E-02
169GO:0051607: defense response to virus3.66E-02
170GO:0009911: positive regulation of flower development3.82E-02
171GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process3.88E-02
172GO:0050832: defense response to fungus3.91E-02
173GO:0009788: negative regulation of abscisic acid-activated signaling pathway3.97E-02
174GO:0010029: regulation of seed germination3.97E-02
175GO:0009816: defense response to bacterium, incompatible interaction3.97E-02
176GO:0007166: cell surface receptor signaling pathway3.97E-02
177GO:0016567: protein ubiquitination4.09E-02
178GO:0009627: systemic acquired resistance4.13E-02
179GO:0042128: nitrate assimilation4.13E-02
180GO:0006906: vesicle fusion4.13E-02
181GO:0048573: photoperiodism, flowering4.29E-02
182GO:0016311: dephosphorylation4.44E-02
183GO:0016049: cell growth4.44E-02
184GO:0008219: cell death4.61E-02
185GO:0009651: response to salt stress4.87E-02
186GO:0009407: toxin catabolic process4.94E-02
RankGO TermAdjusted P value
1GO:0004168: dolichol kinase activity0.00E+00
2GO:0032050: clathrin heavy chain binding2.94E-04
3GO:2001227: quercitrin binding2.94E-04
4GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity2.94E-04
5GO:0015085: calcium ion transmembrane transporter activity2.94E-04
6GO:0050308: sugar-phosphatase activity2.94E-04
7GO:0004657: proline dehydrogenase activity2.94E-04
8GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity2.94E-04
9GO:2001147: camalexin binding2.94E-04
10GO:0090353: polygalacturonase inhibitor activity2.94E-04
11GO:0016301: kinase activity4.60E-04
12GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity5.21E-04
13GO:0043565: sequence-specific DNA binding5.48E-04
14GO:0008728: GTP diphosphokinase activity6.45E-04
15GO:0009931: calcium-dependent protein serine/threonine kinase activity6.94E-04
16GO:0004683: calmodulin-dependent protein kinase activity7.43E-04
17GO:0015189: L-lysine transmembrane transporter activity1.50E-03
18GO:0015181: arginine transmembrane transporter activity1.50E-03
19GO:0016656: monodehydroascorbate reductase (NADH) activity1.50E-03
20GO:0043424: protein histidine kinase binding1.53E-03
21GO:0005515: protein binding1.61E-03
22GO:0033612: receptor serine/threonine kinase binding1.68E-03
23GO:0047769: arogenate dehydratase activity2.01E-03
24GO:0004664: prephenate dehydratase activity2.01E-03
25GO:0005313: L-glutamate transmembrane transporter activity2.01E-03
26GO:0043495: protein anchor2.01E-03
27GO:0010294: abscisic acid glucosyltransferase activity2.56E-03
28GO:0070696: transmembrane receptor protein serine/threonine kinase binding2.56E-03
29GO:0004605: phosphatidate cytidylyltransferase activity3.16E-03
30GO:0008519: ammonium transmembrane transporter activity3.16E-03
31GO:0004672: protein kinase activity3.48E-03
32GO:0004012: phospholipid-translocating ATPase activity3.81E-03
33GO:0005509: calcium ion binding4.19E-03
34GO:0043295: glutathione binding4.49E-03
35GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity5.21E-03
36GO:0005544: calcium-dependent phospholipid binding5.21E-03
37GO:0004869: cysteine-type endopeptidase inhibitor activity5.21E-03
38GO:0004708: MAP kinase kinase activity5.21E-03
39GO:0004714: transmembrane receptor protein tyrosine kinase activity5.21E-03
40GO:0004806: triglyceride lipase activity5.75E-03
41GO:0004430: 1-phosphatidylinositol 4-kinase activity5.98E-03
42GO:0005524: ATP binding6.95E-03
43GO:0015112: nitrate transmembrane transporter activity7.60E-03
44GO:0015174: basic amino acid transmembrane transporter activity7.60E-03
45GO:0047617: acyl-CoA hydrolase activity7.60E-03
46GO:0030234: enzyme regulator activity8.48E-03
47GO:0004805: trehalose-phosphatase activity8.48E-03
48GO:0005516: calmodulin binding9.24E-03
49GO:0005543: phospholipid binding9.38E-03
50GO:0005388: calcium-transporting ATPase activity1.13E-02
51GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.13E-02
52GO:0008083: growth factor activity1.23E-02
53GO:0051119: sugar transmembrane transporter activity1.33E-02
54GO:0004190: aspartic-type endopeptidase activity1.33E-02
55GO:0043130: ubiquitin binding1.55E-02
56GO:0015171: amino acid transmembrane transporter activity1.56E-02
57GO:0008234: cysteine-type peptidase activity1.56E-02
58GO:0004707: MAP kinase activity1.78E-02
59GO:0003700: transcription factor activity, sequence-specific DNA binding2.13E-02
60GO:0004722: protein serine/threonine phosphatase activity2.31E-02
61GO:0005355: glucose transmembrane transporter activity2.66E-02
62GO:0004842: ubiquitin-protein transferase activity2.67E-02
63GO:0004197: cysteine-type endopeptidase activity3.08E-02
64GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.24E-02
65GO:0016597: amino acid binding3.66E-02
66GO:0004721: phosphoprotein phosphatase activity4.29E-02
67GO:0042802: identical protein binding4.41E-02
68GO:0044212: transcription regulatory region DNA binding4.57E-02
69GO:0015238: drug transmembrane transporter activity4.77E-02
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Gene type



Gene DE type