Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G25265

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
2GO:0010401: pectic galactan metabolic process0.00E+00
3GO:0001881: receptor recycling0.00E+00
4GO:0072722: response to amitrole0.00E+00
5GO:0010055: atrichoblast differentiation0.00E+00
6GO:0006858: extracellular transport0.00E+00
7GO:0043132: NAD transport1.48E-06
8GO:0090630: activation of GTPase activity5.48E-06
9GO:0006511: ubiquitin-dependent protein catabolic process1.00E-04
10GO:0006680: glucosylceramide catabolic process1.75E-04
11GO:0031338: regulation of vesicle fusion1.75E-04
12GO:0032107: regulation of response to nutrient levels1.75E-04
13GO:0035266: meristem growth1.75E-04
14GO:0016337: single organismal cell-cell adhesion1.75E-04
15GO:0007292: female gamete generation1.75E-04
16GO:0035352: NAD transmembrane transport1.75E-04
17GO:0008202: steroid metabolic process2.46E-04
18GO:0010105: negative regulation of ethylene-activated signaling pathway3.86E-04
19GO:0051788: response to misfolded protein3.96E-04
20GO:0009727: detection of ethylene stimulus3.96E-04
21GO:1901703: protein localization involved in auxin polar transport3.96E-04
22GO:1902000: homogentisate catabolic process3.96E-04
23GO:0019725: cellular homeostasis3.96E-04
24GO:0015012: heparan sulfate proteoglycan biosynthetic process3.96E-04
25GO:0042814: monopolar cell growth3.96E-04
26GO:0046939: nucleotide phosphorylation3.96E-04
27GO:0006024: glycosaminoglycan biosynthetic process3.96E-04
28GO:0052541: plant-type cell wall cellulose metabolic process3.96E-04
29GO:0010102: lateral root morphogenesis4.39E-04
30GO:0008333: endosome to lysosome transport6.47E-04
31GO:0051176: positive regulation of sulfur metabolic process6.47E-04
32GO:0044375: regulation of peroxisome size6.47E-04
33GO:0010186: positive regulation of cellular defense response6.47E-04
34GO:0010272: response to silver ion6.47E-04
35GO:0009072: aromatic amino acid family metabolic process6.47E-04
36GO:0060968: regulation of gene silencing6.47E-04
37GO:0016998: cell wall macromolecule catabolic process8.23E-04
38GO:0015858: nucleoside transport9.23E-04
39GO:0048577: negative regulation of short-day photoperiodism, flowering9.23E-04
40GO:0070301: cellular response to hydrogen peroxide9.23E-04
41GO:0010227: floral organ abscission9.77E-04
42GO:0000919: cell plate assembly1.22E-03
43GO:0060548: negative regulation of cell death1.22E-03
44GO:0048638: regulation of developmental growth1.22E-03
45GO:0010183: pollen tube guidance1.52E-03
46GO:0098719: sodium ion import across plasma membrane1.56E-03
47GO:0006665: sphingolipid metabolic process1.56E-03
48GO:0042176: regulation of protein catabolic process1.91E-03
49GO:0060918: auxin transport1.91E-03
50GO:0003006: developmental process involved in reproduction1.91E-03
51GO:0009117: nucleotide metabolic process1.91E-03
52GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly1.91E-03
53GO:0048827: phyllome development1.91E-03
54GO:0010264: myo-inositol hexakisphosphate biosynthetic process1.91E-03
55GO:0048232: male gamete generation1.91E-03
56GO:0043248: proteasome assembly1.91E-03
57GO:0006914: autophagy1.96E-03
58GO:0009615: response to virus2.34E-03
59GO:0009627: systemic acquired resistance2.61E-03
60GO:0000122: negative regulation of transcription from RNA polymerase II promoter2.70E-03
61GO:0080027: response to herbivore2.70E-03
62GO:0006950: response to stress2.75E-03
63GO:0010078: maintenance of root meristem identity3.13E-03
64GO:0006499: N-terminal protein myristoylation3.35E-03
65GO:0009407: toxin catabolic process3.35E-03
66GO:0009657: plastid organization3.58E-03
67GO:0007338: single fertilization4.05E-03
68GO:0006839: mitochondrial transport4.38E-03
69GO:0048268: clathrin coat assembly4.54E-03
70GO:0048354: mucilage biosynthetic process involved in seed coat development4.54E-03
71GO:0051453: regulation of intracellular pH4.54E-03
72GO:0090332: stomatal closure4.54E-03
73GO:0006897: endocytosis4.56E-03
74GO:0006032: chitin catabolic process5.05E-03
75GO:0048829: root cap development5.05E-03
76GO:0043085: positive regulation of catalytic activity5.58E-03
77GO:0000272: polysaccharide catabolic process5.58E-03
78GO:0048229: gametophyte development5.58E-03
79GO:0030148: sphingolipid biosynthetic process5.58E-03
80GO:0010015: root morphogenesis5.58E-03
81GO:0006790: sulfur compound metabolic process6.13E-03
82GO:0006807: nitrogen compound metabolic process6.70E-03
83GO:0055046: microgametogenesis6.70E-03
84GO:0009933: meristem structural organization7.28E-03
85GO:0007034: vacuolar transport7.28E-03
86GO:0010540: basipetal auxin transport7.28E-03
87GO:0009266: response to temperature stimulus7.28E-03
88GO:0010039: response to iron ion7.89E-03
89GO:0090351: seedling development7.89E-03
90GO:0046854: phosphatidylinositol phosphorylation7.89E-03
91GO:0007031: peroxisome organization7.89E-03
92GO:0045454: cell redox homeostasis7.98E-03
93GO:0006886: intracellular protein transport8.30E-03
94GO:0009624: response to nematode9.49E-03
95GO:0006874: cellular calcium ion homeostasis9.80E-03
96GO:0016226: iron-sulfur cluster assembly1.12E-02
97GO:0030433: ubiquitin-dependent ERAD pathway1.12E-02
98GO:0080092: regulation of pollen tube growth1.12E-02
99GO:0071456: cellular response to hypoxia1.12E-02
100GO:0071369: cellular response to ethylene stimulus1.19E-02
101GO:0006012: galactose metabolic process1.19E-02
102GO:0009561: megagametogenesis1.26E-02
103GO:0009058: biosynthetic process1.26E-02
104GO:0042147: retrograde transport, endosome to Golgi1.33E-02
105GO:0070417: cellular response to cold1.33E-02
106GO:0016117: carotenoid biosynthetic process1.33E-02
107GO:0010087: phloem or xylem histogenesis1.41E-02
108GO:0010118: stomatal movement1.41E-02
109GO:0006662: glycerol ether metabolic process1.49E-02
110GO:0048544: recognition of pollen1.56E-02
111GO:0006814: sodium ion transport1.56E-02
112GO:0055072: iron ion homeostasis1.64E-02
113GO:0006623: protein targeting to vacuole1.64E-02
114GO:0010150: leaf senescence1.65E-02
115GO:0006891: intra-Golgi vesicle-mediated transport1.72E-02
116GO:0032502: developmental process1.81E-02
117GO:0030163: protein catabolic process1.89E-02
118GO:0009567: double fertilization forming a zygote and endosperm1.98E-02
119GO:0071805: potassium ion transmembrane transport2.06E-02
120GO:0006904: vesicle docking involved in exocytosis2.06E-02
121GO:0009555: pollen development2.15E-02
122GO:0000910: cytokinesis2.15E-02
123GO:0015031: protein transport2.18E-02
124GO:0006888: ER to Golgi vesicle-mediated transport2.52E-02
125GO:0009817: defense response to fungus, incompatible interaction2.71E-02
126GO:0008219: cell death2.71E-02
127GO:0010311: lateral root formation2.80E-02
128GO:0055085: transmembrane transport2.90E-02
129GO:0006811: ion transport2.90E-02
130GO:0046686: response to cadmium ion2.94E-02
131GO:0009723: response to ethylene2.95E-02
132GO:0048527: lateral root development3.00E-02
133GO:0010043: response to zinc ion3.00E-02
134GO:0009910: negative regulation of flower development3.00E-02
135GO:0045087: innate immune response3.20E-02
136GO:0034599: cellular response to oxidative stress3.31E-02
137GO:0006099: tricarboxylic acid cycle3.31E-02
138GO:0006887: exocytosis3.62E-02
139GO:0009644: response to high light intensity4.06E-02
140GO:0006869: lipid transport4.14E-02
141GO:0009965: leaf morphogenesis4.17E-02
142GO:0006855: drug transmembrane transport4.28E-02
143GO:0000165: MAPK cascade4.39E-02
144GO:0009664: plant-type cell wall organization4.51E-02
145GO:0009809: lignin biosynthetic process4.74E-02
146GO:0006486: protein glycosylation4.74E-02
147GO:0048364: root development4.85E-02
148GO:0051603: proteolysis involved in cellular protein catabolic process4.86E-02
149GO:0006857: oligopeptide transport4.97E-02
RankGO TermAdjusted P value
1GO:0051765: inositol tetrakisphosphate kinase activity0.00E+00
2GO:0044610: FMN transmembrane transporter activity0.00E+00
3GO:0016034: maleylacetoacetate isomerase activity0.00E+00
4GO:0051766: inositol trisphosphate kinase activity0.00E+00
5GO:0051724: NAD transporter activity1.48E-06
6GO:0008142: oxysterol binding1.69E-04
7GO:0047326: inositol tetrakisphosphate 5-kinase activity1.75E-04
8GO:0052631: sphingolipid delta-8 desaturase activity1.75E-04
9GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity1.75E-04
10GO:0048037: cofactor binding1.75E-04
11GO:0019786: Atg8-specific protease activity1.75E-04
12GO:0004348: glucosylceramidase activity1.75E-04
13GO:0015230: FAD transmembrane transporter activity1.75E-04
14GO:2001147: camalexin binding1.75E-04
15GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity1.75E-04
16GO:2001227: quercitrin binding1.75E-04
17GO:0000824: inositol tetrakisphosphate 3-kinase activity1.75E-04
18GO:0008047: enzyme activator activity2.90E-04
19GO:0032934: sterol binding3.96E-04
20GO:0004775: succinate-CoA ligase (ADP-forming) activity3.96E-04
21GO:0019779: Atg8 activating enzyme activity3.96E-04
22GO:1990585: hydroxyproline O-arabinosyltransferase activity3.96E-04
23GO:0051980: iron-nicotianamine transmembrane transporter activity3.96E-04
24GO:0004385: guanylate kinase activity3.96E-04
25GO:0008517: folic acid transporter activity3.96E-04
26GO:0004776: succinate-CoA ligase (GDP-forming) activity3.96E-04
27GO:0015228: coenzyme A transmembrane transporter activity3.96E-04
28GO:0008061: chitin binding5.54E-04
29GO:0042409: caffeoyl-CoA O-methyltransferase activity6.47E-04
30GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity6.47E-04
31GO:0004298: threonine-type endopeptidase activity8.23E-04
32GO:0035251: UDP-glucosyltransferase activity8.23E-04
33GO:0051740: ethylene binding9.23E-04
34GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity9.23E-04
35GO:0019201: nucleotide kinase activity9.23E-04
36GO:0047134: protein-disulfide reductase activity1.14E-03
37GO:0019776: Atg8 ligase activity1.22E-03
38GO:0016004: phospholipase activator activity1.22E-03
39GO:0009916: alternative oxidase activity1.22E-03
40GO:0004301: epoxide hydrolase activity1.22E-03
41GO:0004791: thioredoxin-disulfide reductase activity1.42E-03
42GO:0080122: AMP transmembrane transporter activity1.56E-03
43GO:0017137: Rab GTPase binding1.56E-03
44GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity1.91E-03
45GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity1.91E-03
46GO:0036402: proteasome-activating ATPase activity1.91E-03
47GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity2.30E-03
48GO:0004017: adenylate kinase activity2.30E-03
49GO:0005347: ATP transmembrane transporter activity2.30E-03
50GO:0015217: ADP transmembrane transporter activity2.30E-03
51GO:0043295: glutathione binding2.70E-03
52GO:0005544: calcium-dependent phospholipid binding3.13E-03
53GO:0004714: transmembrane receptor protein tyrosine kinase activity3.13E-03
54GO:0004034: aldose 1-epimerase activity3.13E-03
55GO:0005096: GTPase activator activity3.19E-03
56GO:0045309: protein phosphorylated amino acid binding4.54E-03
57GO:0004364: glutathione transferase activity4.75E-03
58GO:0004673: protein histidine kinase activity5.05E-03
59GO:0030234: enzyme regulator activity5.05E-03
60GO:0004568: chitinase activity5.05E-03
61GO:0008171: O-methyltransferase activity5.05E-03
62GO:0005545: 1-phosphatidylinositol binding5.05E-03
63GO:0015386: potassium:proton antiporter activity5.58E-03
64GO:0019904: protein domain specific binding5.58E-03
65GO:0008559: xenobiotic-transporting ATPase activity5.58E-03
66GO:0015198: oligopeptide transporter activity6.13E-03
67GO:0000155: phosphorelay sensor kinase activity6.70E-03
68GO:0004175: endopeptidase activity7.28E-03
69GO:0017025: TBP-class protein binding7.89E-03
70GO:0005217: intracellular ligand-gated ion channel activity7.89E-03
71GO:0004970: ionotropic glutamate receptor activity7.89E-03
72GO:0016874: ligase activity8.94E-03
73GO:0001046: core promoter sequence-specific DNA binding9.15E-03
74GO:0004540: ribonuclease activity1.05E-02
75GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding1.36E-02
76GO:0005199: structural constituent of cell wall1.49E-02
77GO:0030276: clathrin binding1.49E-02
78GO:0001085: RNA polymerase II transcription factor binding1.49E-02
79GO:0016853: isomerase activity1.56E-02
80GO:0015297: antiporter activity1.57E-02
81GO:0004872: receptor activity1.64E-02
82GO:0015385: sodium:proton antiporter activity1.89E-02
83GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor1.89E-02
84GO:0042626: ATPase activity, coupled to transmembrane movement of substances2.09E-02
85GO:0004674: protein serine/threonine kinase activity2.48E-02
86GO:0004601: peroxidase activity2.55E-02
87GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding3.00E-02
88GO:0035091: phosphatidylinositol binding4.06E-02
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Gene type



Gene DE type