Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G25260

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010324: membrane invagination0.00E+00
2GO:0071327: cellular response to trehalose stimulus0.00E+00
3GO:0042350: GDP-L-fucose biosynthetic process0.00E+00
4GO:0098755: maintenance of seed dormancy by absisic acid0.00E+00
5GO:1900367: positive regulation of defense response to insect0.00E+00
6GO:0006005: L-fucose biosynthetic process0.00E+00
7GO:0006983: ER overload response0.00E+00
8GO:0006468: protein phosphorylation3.86E-10
9GO:0060548: negative regulation of cell death1.33E-06
10GO:0009626: plant-type hypersensitive response2.63E-06
11GO:0019725: cellular homeostasis9.31E-06
12GO:0010200: response to chitin2.66E-05
13GO:0031348: negative regulation of defense response2.75E-05
14GO:0042351: 'de novo' GDP-L-fucose biosynthetic process3.19E-05
15GO:0010112: regulation of systemic acquired resistance4.36E-05
16GO:0042742: defense response to bacterium6.13E-05
17GO:0000187: activation of MAPK activity6.89E-05
18GO:0015696: ammonium transport6.89E-05
19GO:0035556: intracellular signal transduction1.18E-04
20GO:0072488: ammonium transmembrane transport1.20E-04
21GO:0080142: regulation of salicylic acid biosynthetic process1.20E-04
22GO:0046777: protein autophosphorylation1.76E-04
23GO:0010225: response to UV-C1.85E-04
24GO:0034052: positive regulation of plant-type hypersensitive response1.85E-04
25GO:0018105: peptidyl-serine phosphorylation3.34E-04
26GO:2000037: regulation of stomatal complex patterning3.52E-04
27GO:0010365: positive regulation of ethylene biosynthetic process4.59E-04
28GO:0035352: NAD transmembrane transport4.59E-04
29GO:0019567: arabinose biosynthetic process4.59E-04
30GO:0015969: guanosine tetraphosphate metabolic process4.59E-04
31GO:0009609: response to symbiotic bacterium4.59E-04
32GO:0010421: hydrogen peroxide-mediated programmed cell death4.59E-04
33GO:0051180: vitamin transport4.59E-04
34GO:0010482: regulation of epidermal cell division4.59E-04
35GO:0030974: thiamine pyrophosphate transport4.59E-04
36GO:1901183: positive regulation of camalexin biosynthetic process4.59E-04
37GO:0009270: response to humidity4.59E-04
38GO:0006643: membrane lipid metabolic process4.59E-04
39GO:0032469: endoplasmic reticulum calcium ion homeostasis4.59E-04
40GO:2000031: regulation of salicylic acid mediated signaling pathway6.90E-04
41GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway9.73E-04
42GO:0043132: NAD transport9.90E-04
43GO:0002221: pattern recognition receptor signaling pathway9.90E-04
44GO:0080151: positive regulation of salicylic acid mediated signaling pathway9.90E-04
45GO:0009838: abscission9.90E-04
46GO:0080185: effector dependent induction by symbiont of host immune response9.90E-04
47GO:0010618: aerenchyma formation9.90E-04
48GO:0080181: lateral root branching9.90E-04
49GO:0000719: photoreactive repair9.90E-04
50GO:0044419: interspecies interaction between organisms9.90E-04
51GO:0043066: negative regulation of apoptotic process9.90E-04
52GO:0031349: positive regulation of defense response9.90E-04
53GO:0015893: drug transport9.90E-04
54GO:0051258: protein polymerization9.90E-04
55GO:0007166: cell surface receptor signaling pathway1.08E-03
56GO:0006470: protein dephosphorylation1.08E-03
57GO:0001666: response to hypoxia1.37E-03
58GO:0015031: protein transport1.41E-03
59GO:0009751: response to salicylic acid1.42E-03
60GO:0009816: defense response to bacterium, incompatible interaction1.47E-03
61GO:0012501: programmed cell death1.49E-03
62GO:0045793: positive regulation of cell size1.61E-03
63GO:0010186: positive regulation of cellular defense response1.61E-03
64GO:0015695: organic cation transport1.61E-03
65GO:0006048: UDP-N-acetylglucosamine biosynthetic process1.61E-03
66GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway1.61E-03
67GO:0034051: negative regulation of plant-type hypersensitive response1.61E-03
68GO:1900140: regulation of seedling development1.61E-03
69GO:0010229: inflorescence development1.70E-03
70GO:0018107: peptidyl-threonine phosphorylation1.70E-03
71GO:0009266: response to temperature stimulus1.92E-03
72GO:0006979: response to oxidative stress2.28E-03
73GO:0046713: borate transport2.34E-03
74GO:0048194: Golgi vesicle budding2.34E-03
75GO:0051639: actin filament network formation2.34E-03
76GO:0043207: response to external biotic stimulus2.34E-03
77GO:0072334: UDP-galactose transmembrane transport2.34E-03
78GO:0015749: monosaccharide transport2.34E-03
79GO:0072583: clathrin-dependent endocytosis2.34E-03
80GO:0009226: nucleotide-sugar biosynthetic process2.34E-03
81GO:0048530: fruit morphogenesis2.34E-03
82GO:0002679: respiratory burst involved in defense response2.34E-03
83GO:0016192: vesicle-mediated transport2.94E-03
84GO:0045227: capsule polysaccharide biosynthetic process3.14E-03
85GO:0051764: actin crosslink formation3.14E-03
86GO:0033358: UDP-L-arabinose biosynthetic process3.14E-03
87GO:2000038: regulation of stomatal complex development3.14E-03
88GO:0051567: histone H3-K9 methylation3.14E-03
89GO:0071456: cellular response to hypoxia3.53E-03
90GO:0009814: defense response, incompatible interaction3.53E-03
91GO:2000022: regulation of jasmonic acid mediated signaling pathway3.53E-03
92GO:0051707: response to other organism3.61E-03
93GO:0010150: leaf senescence3.84E-03
94GO:0010227: floral organ abscission3.85E-03
95GO:0006886: intracellular protein transport3.90E-03
96GO:0009697: salicylic acid biosynthetic process4.03E-03
97GO:0031347: regulation of defense response4.61E-03
98GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process4.61E-03
99GO:0009759: indole glucosinolate biosynthetic process4.99E-03
100GO:0010942: positive regulation of cell death4.99E-03
101GO:1900425: negative regulation of defense response to bacterium4.99E-03
102GO:0009117: nucleotide metabolic process4.99E-03
103GO:0006574: valine catabolic process4.99E-03
104GO:0009617: response to bacterium5.03E-03
105GO:0010555: response to mannitol6.02E-03
106GO:0010310: regulation of hydrogen peroxide metabolic process6.02E-03
107GO:2000067: regulation of root morphogenesis6.02E-03
108GO:0045926: negative regulation of growth6.02E-03
109GO:0009094: L-phenylalanine biosynthetic process6.02E-03
110GO:0031930: mitochondria-nucleus signaling pathway6.02E-03
111GO:0010199: organ boundary specification between lateral organs and the meristem6.02E-03
112GO:0009749: response to glucose6.12E-03
113GO:0002229: defense response to oomycetes6.55E-03
114GO:0010044: response to aluminum ion7.11E-03
115GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway7.11E-03
116GO:0010161: red light signaling pathway7.11E-03
117GO:0009610: response to symbiotic fungus7.11E-03
118GO:0046470: phosphatidylcholine metabolic process7.11E-03
119GO:0043090: amino acid import7.11E-03
120GO:0071446: cellular response to salicylic acid stimulus7.11E-03
121GO:1900056: negative regulation of leaf senescence7.11E-03
122GO:0035265: organ growth8.28E-03
123GO:0009787: regulation of abscisic acid-activated signaling pathway8.28E-03
124GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline8.28E-03
125GO:0009819: drought recovery8.28E-03
126GO:0030162: regulation of proteolysis8.28E-03
127GO:0006605: protein targeting8.28E-03
128GO:0006904: vesicle docking involved in exocytosis8.45E-03
129GO:0009742: brassinosteroid mediated signaling pathway8.95E-03
130GO:0007186: G-protein coupled receptor signaling pathway9.51E-03
131GO:0010120: camalexin biosynthetic process9.51E-03
132GO:0080167: response to karrikin1.04E-02
133GO:0009627: systemic acquired resistance1.06E-02
134GO:0009056: catabolic process1.08E-02
135GO:0046685: response to arsenic-containing substance1.08E-02
136GO:0006098: pentose-phosphate shunt1.08E-02
137GO:0051865: protein autoubiquitination1.08E-02
138GO:0090333: regulation of stomatal closure1.08E-02
139GO:0046916: cellular transition metal ion homeostasis1.08E-02
140GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.09E-02
141GO:0016049: cell growth1.18E-02
142GO:1900426: positive regulation of defense response to bacterium1.22E-02
143GO:0008219: cell death1.24E-02
144GO:0007165: signal transduction1.26E-02
145GO:0009737: response to abscisic acid1.32E-02
146GO:0043069: negative regulation of programmed cell death1.36E-02
147GO:0009750: response to fructose1.50E-02
148GO:0048229: gametophyte development1.50E-02
149GO:0048765: root hair cell differentiation1.50E-02
150GO:0000038: very long-chain fatty acid metabolic process1.50E-02
151GO:0019684: photosynthesis, light reaction1.50E-02
152GO:0006865: amino acid transport1.51E-02
153GO:0016925: protein sumoylation1.66E-02
154GO:0006890: retrograde vesicle-mediated transport, Golgi to ER1.66E-02
155GO:0002213: defense response to insect1.66E-02
156GO:0010105: negative regulation of ethylene-activated signaling pathway1.66E-02
157GO:0006839: mitochondrial transport1.80E-02
158GO:0030001: metal ion transport1.80E-02
159GO:0030036: actin cytoskeleton organization1.81E-02
160GO:0055046: microgametogenesis1.81E-02
161GO:0016310: phosphorylation1.82E-02
162GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process1.92E-02
163GO:0007034: vacuolar transport1.98E-02
164GO:0000209: protein polyubiquitination2.12E-02
165GO:0070588: calcium ion transmembrane transport2.14E-02
166GO:0046854: phosphatidylinositol phosphorylation2.14E-02
167GO:0010053: root epidermal cell differentiation2.14E-02
168GO:0009225: nucleotide-sugar metabolic process2.14E-02
169GO:0042343: indole glucosinolate metabolic process2.14E-02
170GO:0010167: response to nitrate2.14E-02
171GO:0000165: MAPK cascade2.47E-02
172GO:2000377: regulation of reactive oxygen species metabolic process2.49E-02
173GO:0080147: root hair cell development2.49E-02
174GO:0051017: actin filament bundle assembly2.49E-02
175GO:0006952: defense response2.63E-02
176GO:0051302: regulation of cell division2.67E-02
177GO:0010026: trichome differentiation2.67E-02
178GO:0009809: lignin biosynthetic process2.75E-02
179GO:0098542: defense response to other organism2.86E-02
180GO:0010431: seed maturation2.86E-02
181GO:0009625: response to insect3.25E-02
182GO:0006012: galactose metabolic process3.25E-02
183GO:0009411: response to UV3.25E-02
184GO:0009306: protein secretion3.45E-02
185GO:0009789: positive regulation of abscisic acid-activated signaling pathway3.65E-02
186GO:0006810: transport3.68E-02
187GO:0000271: polysaccharide biosynthetic process3.86E-02
188GO:0009624: response to nematode3.91E-02
189GO:0046323: glucose import4.07E-02
190GO:0009741: response to brassinosteroid4.07E-02
191GO:0045489: pectin biosynthetic process4.07E-02
192GO:0071554: cell wall organization or biogenesis4.72E-02
193GO:0045892: negative regulation of transcription, DNA-templated4.80E-02
194GO:0007264: small GTPase mediated signal transduction4.95E-02
RankGO TermAdjusted P value
1GO:0050577: GDP-L-fucose synthase activity0.00E+00
2GO:0004610: phosphoacetylglucosamine mutase activity0.00E+00
3GO:0050220: prostaglandin-E synthase activity0.00E+00
4GO:0005358: high-affinity hydrogen:glucose symporter activity0.00E+00
5GO:0004674: protein serine/threonine kinase activity3.94E-09
6GO:0016301: kinase activity1.52E-08
7GO:0008320: protein transmembrane transporter activity1.97E-07
8GO:0005524: ATP binding1.10E-06
9GO:0004672: protein kinase activity3.16E-06
10GO:0008519: ammonium transmembrane transporter activity2.63E-04
11GO:0033612: receptor serine/threonine kinase binding3.47E-04
12GO:0009679: hexose:proton symporter activity4.59E-04
13GO:0032050: clathrin heavy chain binding4.59E-04
14GO:2001227: quercitrin binding4.59E-04
15GO:1901149: salicylic acid binding4.59E-04
16GO:0090422: thiamine pyrophosphate transporter activity4.59E-04
17GO:0015085: calcium ion transmembrane transporter activity4.59E-04
18GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity4.59E-04
19GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity4.59E-04
20GO:2001147: camalexin binding4.59E-04
21GO:0004708: MAP kinase kinase activity5.66E-04
22GO:0004714: transmembrane receptor protein tyrosine kinase activity5.66E-04
23GO:0004675: transmembrane receptor protein serine/threonine kinase activity7.54E-04
24GO:0051724: NAD transporter activity9.90E-04
25GO:0015036: disulfide oxidoreductase activity9.90E-04
26GO:0008728: GTP diphosphokinase activity9.90E-04
27GO:0004385: guanylate kinase activity9.90E-04
28GO:0004713: protein tyrosine kinase activity1.13E-03
29GO:0009931: calcium-dependent protein serine/threonine kinase activity1.58E-03
30GO:0001664: G-protein coupled receptor binding1.61E-03
31GO:0019948: SUMO activating enzyme activity1.61E-03
32GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity1.61E-03
33GO:0031683: G-protein beta/gamma-subunit complex binding1.61E-03
34GO:0004683: calmodulin-dependent protein kinase activity1.69E-03
35GO:0005509: calcium ion binding1.84E-03
36GO:0050373: UDP-arabinose 4-epimerase activity3.14E-03
37GO:0047769: arogenate dehydratase activity3.14E-03
38GO:0004664: prephenate dehydratase activity3.14E-03
39GO:0070696: transmembrane receptor protein serine/threonine kinase binding4.03E-03
40GO:0005459: UDP-galactose transmembrane transporter activity4.03E-03
41GO:0015145: monosaccharide transmembrane transporter activity4.03E-03
42GO:0005546: phosphatidylinositol-4,5-bisphosphate binding4.03E-03
43GO:0016853: isomerase activity5.70E-03
44GO:0050662: coenzyme binding5.70E-03
45GO:0004012: phospholipid-translocating ATPase activity6.02E-03
46GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity6.02E-03
47GO:0003978: UDP-glucose 4-epimerase activity6.02E-03
48GO:0004656: procollagen-proline 4-dioxygenase activity6.02E-03
49GO:0016740: transferase activity6.74E-03
50GO:0102425: myricetin 3-O-glucosyltransferase activity7.11E-03
51GO:0102360: daphnetin 3-O-glucosyltransferase activity7.11E-03
52GO:0043295: glutathione binding7.11E-03
53GO:0047893: flavonol 3-O-glucosyltransferase activity8.28E-03
54GO:0005544: calcium-dependent phospholipid binding8.28E-03
55GO:0004869: cysteine-type endopeptidase inhibitor activity8.28E-03
56GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity8.45E-03
57GO:0004630: phospholipase D activity9.51E-03
58GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity9.51E-03
59GO:0004430: 1-phosphatidylinositol 4-kinase activity9.51E-03
60GO:0005516: calmodulin binding1.01E-02
61GO:0008375: acetylglucosaminyltransferase activity1.06E-02
62GO:0008138: protein tyrosine/serine/threonine phosphatase activity1.08E-02
63GO:0004806: triglyceride lipase activity1.12E-02
64GO:0005515: protein binding1.34E-02
65GO:0030234: enzyme regulator activity1.36E-02
66GO:0008171: O-methyltransferase activity1.36E-02
67GO:0004871: signal transducer activity1.46E-02
68GO:0005543: phospholipid binding1.50E-02
69GO:0004722: protein serine/threonine phosphatase activity1.57E-02
70GO:0015198: oligopeptide transporter activity1.66E-02
71GO:0031072: heat shock protein binding1.81E-02
72GO:0005262: calcium channel activity1.81E-02
73GO:0005388: calcium-transporting ATPase activity1.81E-02
74GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.81E-02
75GO:0004190: aspartic-type endopeptidase activity2.14E-02
76GO:0005198: structural molecule activity2.30E-02
77GO:0004725: protein tyrosine phosphatase activity2.32E-02
78GO:0031418: L-ascorbic acid binding2.49E-02
79GO:0003954: NADH dehydrogenase activity2.49E-02
80GO:0019706: protein-cysteine S-palmitoyltransferase activity2.86E-02
81GO:0035251: UDP-glucosyltransferase activity2.86E-02
82GO:0004707: MAP kinase activity2.86E-02
83GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity3.05E-02
84GO:0015171: amino acid transmembrane transporter activity3.05E-02
85GO:0031625: ubiquitin protein ligase binding3.05E-02
86GO:0004842: ubiquitin-protein transferase activity3.29E-02
87GO:0005525: GTP binding3.36E-02
88GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups3.36E-02
89GO:0008514: organic anion transmembrane transporter activity3.45E-02
90GO:0022857: transmembrane transporter activity3.69E-02
91GO:0061630: ubiquitin protein ligase activity4.02E-02
92GO:0015035: protein disulfide oxidoreductase activity4.03E-02
93GO:0016758: transferase activity, transferring hexosyl groups4.76E-02
94GO:0004197: cysteine-type endopeptidase activity4.95E-02
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Gene type



Gene DE type