Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G25130

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0034337: RNA folding0.00E+00
2GO:0006982: response to lipid hydroperoxide0.00E+00
3GO:0010335: response to non-ionic osmotic stress0.00E+00
4GO:1902171: regulation of tocopherol cyclase activity0.00E+00
5GO:1901918: negative regulation of exoribonuclease activity0.00E+00
6GO:0033494: ferulate metabolic process0.00E+00
7GO:0090279: regulation of calcium ion import0.00E+00
8GO:0046471: phosphatidylglycerol metabolic process0.00E+00
9GO:0071474: cellular hyperosmotic response0.00E+00
10GO:0010207: photosystem II assembly9.47E-07
11GO:0006094: gluconeogenesis3.40E-05
12GO:0010143: cutin biosynthetic process4.16E-05
13GO:0055114: oxidation-reduction process1.39E-04
14GO:0016559: peroxisome fission2.22E-04
15GO:0043686: co-translational protein modification2.43E-04
16GO:0043087: regulation of GTPase activity2.43E-04
17GO:0071461: cellular response to redox state2.43E-04
18GO:0046167: glycerol-3-phosphate biosynthetic process2.43E-04
19GO:1902458: positive regulation of stomatal opening2.43E-04
20GO:0010362: negative regulation of anion channel activity by blue light2.43E-04
21GO:0015969: guanosine tetraphosphate metabolic process2.43E-04
22GO:0046467: membrane lipid biosynthetic process2.43E-04
23GO:0031426: polycistronic mRNA processing2.43E-04
24GO:1904966: positive regulation of vitamin E biosynthetic process2.43E-04
25GO:0071277: cellular response to calcium ion2.43E-04
26GO:0000481: maturation of 5S rRNA2.43E-04
27GO:1904964: positive regulation of phytol biosynthetic process2.43E-04
28GO:0006098: pentose-phosphate shunt3.32E-04
29GO:0015995: chlorophyll biosynthetic process5.26E-04
30GO:0010155: regulation of proton transport5.39E-04
31GO:1903426: regulation of reactive oxygen species biosynthetic process5.39E-04
32GO:0015790: UDP-xylose transport5.39E-04
33GO:0030388: fructose 1,6-bisphosphate metabolic process5.39E-04
34GO:0051262: protein tetramerization5.39E-04
35GO:0042819: vitamin B6 biosynthetic process5.39E-04
36GO:1902326: positive regulation of chlorophyll biosynthetic process5.39E-04
37GO:0080005: photosystem stoichiometry adjustment5.39E-04
38GO:0010541: acropetal auxin transport5.39E-04
39GO:0006650: glycerophospholipid metabolic process5.39E-04
40GO:0016024: CDP-diacylglycerol biosynthetic process6.09E-04
41GO:0044375: regulation of peroxisome size8.75E-04
42GO:0006000: fructose metabolic process8.75E-04
43GO:0046168: glycerol-3-phosphate catabolic process8.75E-04
44GO:0010160: formation of animal organ boundary8.75E-04
45GO:0006636: unsaturated fatty acid biosynthetic process9.63E-04
46GO:2001141: regulation of RNA biosynthetic process1.25E-03
47GO:0009152: purine ribonucleotide biosynthetic process1.25E-03
48GO:0046653: tetrahydrofolate metabolic process1.25E-03
49GO:0010239: chloroplast mRNA processing1.25E-03
50GO:0043481: anthocyanin accumulation in tissues in response to UV light1.25E-03
51GO:0006072: glycerol-3-phosphate metabolic process1.25E-03
52GO:0033014: tetrapyrrole biosynthetic process1.25E-03
53GO:0008615: pyridoxine biosynthetic process1.25E-03
54GO:0042823: pyridoxal phosphate biosynthetic process1.25E-03
55GO:0019722: calcium-mediated signaling1.66E-03
56GO:0019464: glycine decarboxylation via glycine cleavage system1.67E-03
57GO:0015994: chlorophyll metabolic process1.67E-03
58GO:0006546: glycine catabolic process1.67E-03
59GO:0006021: inositol biosynthetic process1.67E-03
60GO:0008295: spermidine biosynthetic process1.67E-03
61GO:0009658: chloroplast organization1.78E-03
62GO:0006096: glycolytic process1.98E-03
63GO:0006520: cellular amino acid metabolic process2.09E-03
64GO:0031365: N-terminal protein amino acid modification2.13E-03
65GO:0006564: L-serine biosynthetic process2.13E-03
66GO:0009904: chloroplast accumulation movement2.13E-03
67GO:0010236: plastoquinone biosynthetic process2.13E-03
68GO:0045038: protein import into chloroplast thylakoid membrane2.13E-03
69GO:0042549: photosystem II stabilization2.62E-03
70GO:0006655: phosphatidylglycerol biosynthetic process2.62E-03
71GO:0060918: auxin transport2.62E-03
72GO:0009920: cell plate formation involved in plant-type cell wall biogenesis2.62E-03
73GO:0046855: inositol phosphate dephosphorylation2.62E-03
74GO:0032502: developmental process2.75E-03
75GO:1901259: chloroplast rRNA processing3.15E-03
76GO:0009903: chloroplast avoidance movement3.15E-03
77GO:0007267: cell-cell signaling3.31E-03
78GO:1900056: negative regulation of leaf senescence3.72E-03
79GO:0006400: tRNA modification3.72E-03
80GO:0007155: cell adhesion4.31E-03
81GO:0042255: ribosome assembly4.31E-03
82GO:0009690: cytokinin metabolic process4.31E-03
83GO:0006353: DNA-templated transcription, termination4.31E-03
84GO:0009704: de-etiolation4.31E-03
85GO:0032508: DNA duplex unwinding4.31E-03
86GO:2000070: regulation of response to water deprivation4.31E-03
87GO:0050821: protein stabilization4.31E-03
88GO:0018298: protein-chromophore linkage4.83E-03
89GO:0009932: cell tip growth4.93E-03
90GO:0006002: fructose 6-phosphate metabolic process4.93E-03
91GO:0071482: cellular response to light stimulus4.93E-03
92GO:0015996: chlorophyll catabolic process4.93E-03
93GO:0007186: G-protein coupled receptor signaling pathway4.93E-03
94GO:0009657: plastid organization4.93E-03
95GO:0007623: circadian rhythm5.03E-03
96GO:0006811: ion transport5.33E-03
97GO:0009821: alkaloid biosynthetic process5.59E-03
98GO:0090333: regulation of stomatal closure5.59E-03
99GO:0048507: meristem development5.59E-03
100GO:0006783: heme biosynthetic process5.59E-03
101GO:0009637: response to blue light6.13E-03
102GO:0009638: phototropism6.27E-03
103GO:0006779: porphyrin-containing compound biosynthetic process6.27E-03
104GO:0010380: regulation of chlorophyll biosynthetic process6.27E-03
105GO:0009641: shade avoidance6.99E-03
106GO:0010215: cellulose microfibril organization6.99E-03
107GO:0006535: cysteine biosynthetic process from serine6.99E-03
108GO:0016485: protein processing7.73E-03
109GO:0006352: DNA-templated transcription, initiation7.73E-03
110GO:0008361: regulation of cell size8.49E-03
111GO:0006790: sulfur compound metabolic process8.49E-03
112GO:0045037: protein import into chloroplast stroma8.49E-03
113GO:0018107: peptidyl-threonine phosphorylation9.29E-03
114GO:0009718: anthocyanin-containing compound biosynthetic process9.29E-03
115GO:0009725: response to hormone9.29E-03
116GO:0009767: photosynthetic electron transport chain9.29E-03
117GO:0005986: sucrose biosynthetic process9.29E-03
118GO:0030048: actin filament-based movement9.29E-03
119GO:0009785: blue light signaling pathway9.29E-03
120GO:0042538: hyperosmotic salinity response9.93E-03
121GO:0009887: animal organ morphogenesis1.01E-02
122GO:0010540: basipetal auxin transport1.01E-02
123GO:0009266: response to temperature stimulus1.01E-02
124GO:0010020: chloroplast fission1.01E-02
125GO:0019253: reductive pentose-phosphate cycle1.01E-02
126GO:0010223: secondary shoot formation1.01E-02
127GO:0046854: phosphatidylinositol phosphorylation1.10E-02
128GO:0007031: peroxisome organization1.10E-02
129GO:0042343: indole glucosinolate metabolic process1.10E-02
130GO:0009825: multidimensional cell growth1.10E-02
131GO:0019853: L-ascorbic acid biosynthetic process1.10E-02
132GO:0006833: water transport1.18E-02
133GO:0010025: wax biosynthetic process1.18E-02
134GO:0019344: cysteine biosynthetic process1.27E-02
135GO:0044550: secondary metabolite biosynthetic process1.28E-02
136GO:0015979: photosynthesis1.37E-02
137GO:0048511: rhythmic process1.46E-02
138GO:0098542: defense response to other organism1.46E-02
139GO:0010431: seed maturation1.46E-02
140GO:0061077: chaperone-mediated protein folding1.46E-02
141GO:0055085: transmembrane transport1.53E-02
142GO:0080092: regulation of pollen tube growth1.56E-02
143GO:0019748: secondary metabolic process1.56E-02
144GO:0030433: ubiquitin-dependent ERAD pathway1.56E-02
145GO:0009742: brassinosteroid mediated signaling pathway1.62E-02
146GO:0009294: DNA mediated transformation1.66E-02
147GO:0071369: cellular response to ethylene stimulus1.66E-02
148GO:0048443: stamen development1.76E-02
149GO:0006817: phosphate ion transport1.76E-02
150GO:0009306: protein secretion1.76E-02
151GO:0032259: methylation1.79E-02
152GO:0006629: lipid metabolic process1.89E-02
153GO:0009408: response to heat1.89E-02
154GO:0034220: ion transmembrane transport1.97E-02
155GO:0009058: biosynthetic process2.01E-02
156GO:0010182: sugar mediated signaling pathway2.07E-02
157GO:0009958: positive gravitropism2.07E-02
158GO:0045489: pectin biosynthetic process2.07E-02
159GO:0009646: response to absence of light2.18E-02
160GO:0008654: phospholipid biosynthetic process2.29E-02
161GO:0009791: post-embryonic development2.29E-02
162GO:0010183: pollen tube guidance2.29E-02
163GO:0019252: starch biosynthetic process2.29E-02
164GO:0006633: fatty acid biosynthetic process2.40E-02
165GO:0007264: small GTPase mediated signal transduction2.52E-02
166GO:0009639: response to red or far red light2.76E-02
167GO:0010027: thylakoid membrane organization3.13E-02
168GO:0009788: negative regulation of abscisic acid-activated signaling pathway3.26E-02
169GO:0042128: nitrate assimilation3.39E-02
170GO:0009737: response to abscisic acid3.45E-02
171GO:0016311: dephosphorylation3.65E-02
172GO:0000160: phosphorelay signal transduction system3.92E-02
173GO:0010311: lateral root formation3.92E-02
174GO:0009407: toxin catabolic process4.05E-02
175GO:0010218: response to far red light4.05E-02
176GO:0007568: aging4.19E-02
177GO:0009910: negative regulation of flower development4.19E-02
178GO:0048527: lateral root development4.19E-02
179GO:0010119: regulation of stomatal movement4.19E-02
180GO:0009853: photorespiration4.48E-02
181GO:0016051: carbohydrate biosynthetic process4.48E-02
182GO:0045893: positive regulation of transcription, DNA-templated4.58E-02
183GO:0034599: cellular response to oxidative stress4.62E-02
RankGO TermAdjusted P value
1GO:0008942: nitrite reductase [NAD(P)H] activity0.00E+00
2GO:0035798: 2-alkenal reductase (NADP+) activity0.00E+00
3GO:0036033: mediator complex binding0.00E+00
4GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity0.00E+00
5GO:0046406: magnesium protoporphyrin IX methyltransferase activity0.00E+00
6GO:0009673: low-affinity phosphate transmembrane transporter activity0.00E+00
7GO:0036361: racemase activity, acting on amino acids and derivatives0.00E+00
8GO:0050278: sedoheptulose-bisphosphatase activity0.00E+00
9GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives0.00E+00
10GO:0004332: fructose-bisphosphate aldolase activity9.62E-05
11GO:0000293: ferric-chelate reductase activity9.62E-05
12GO:0004366: glycerol-3-phosphate O-acyltransferase activity9.62E-05
13GO:0004328: formamidase activity2.43E-04
14GO:0010347: L-galactose-1-phosphate phosphatase activity2.43E-04
15GO:0035671: enone reductase activity2.43E-04
16GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity2.43E-04
17GO:0047259: glucomannan 4-beta-mannosyltransferase activity2.43E-04
18GO:0030794: (S)-coclaurine-N-methyltransferase activity2.43E-04
19GO:0005227: calcium activated cation channel activity2.43E-04
20GO:0004325: ferrochelatase activity2.43E-04
21GO:0042586: peptide deformylase activity2.43E-04
22GO:0031957: very long-chain fatty acid-CoA ligase activity2.43E-04
23GO:0050017: L-3-cyanoalanine synthase activity5.39E-04
24GO:0080045: quercetin 3'-O-glucosyltransferase activity5.39E-04
25GO:0042389: omega-3 fatty acid desaturase activity5.39E-04
26GO:0004617: phosphoglycerate dehydrogenase activity5.39E-04
27GO:0004766: spermidine synthase activity5.39E-04
28GO:0052832: inositol monophosphate 3-phosphatase activity5.39E-04
29GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity5.39E-04
30GO:0018708: thiol S-methyltransferase activity5.39E-04
31GO:0008934: inositol monophosphate 1-phosphatase activity5.39E-04
32GO:0052833: inositol monophosphate 4-phosphatase activity5.39E-04
33GO:0005464: UDP-xylose transmembrane transporter activity5.39E-04
34GO:0036381: pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity5.39E-04
35GO:0048531: beta-1,3-galactosyltransferase activity5.39E-04
36GO:0008728: GTP diphosphokinase activity5.39E-04
37GO:0004565: beta-galactosidase activity6.91E-04
38GO:0016742: hydroxymethyl-, formyl- and related transferase activity8.75E-04
39GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity8.75E-04
40GO:0008864: formyltetrahydrofolate deformylase activity8.75E-04
41GO:0050734: hydroxycinnamoyltransferase activity8.75E-04
42GO:0003955: NAD(P)H dehydrogenase (quinone) activity8.75E-04
43GO:0009882: blue light photoreceptor activity1.25E-03
44GO:0004375: glycine dehydrogenase (decarboxylating) activity1.25E-03
45GO:0048027: mRNA 5'-UTR binding1.25E-03
46GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides1.25E-03
47GO:0016851: magnesium chelatase activity1.25E-03
48GO:0042802: identical protein binding1.32E-03
49GO:0016491: oxidoreductase activity1.49E-03
50GO:0003727: single-stranded RNA binding1.66E-03
51GO:0001053: plastid sigma factor activity1.67E-03
52GO:0016987: sigma factor activity1.67E-03
53GO:0043495: protein anchor1.67E-03
54GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups2.07E-03
55GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity2.62E-03
56GO:0080046: quercetin 4'-O-glucosyltransferase activity2.62E-03
57GO:0035673: oligopeptide transmembrane transporter activity2.62E-03
58GO:0042578: phosphoric ester hydrolase activity2.62E-03
59GO:0004124: cysteine synthase activity3.15E-03
60GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity3.15E-03
61GO:0051753: mannan synthase activity3.15E-03
62GO:0102391: decanoate--CoA ligase activity3.15E-03
63GO:0005261: cation channel activity3.15E-03
64GO:0004467: long-chain fatty acid-CoA ligase activity3.72E-03
65GO:0019899: enzyme binding3.72E-03
66GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water4.93E-03
67GO:0030955: potassium ion binding6.27E-03
68GO:0016844: strictosidine synthase activity6.27E-03
69GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity6.27E-03
70GO:0004743: pyruvate kinase activity6.27E-03
71GO:0005089: Rho guanyl-nucleotide exchange factor activity7.73E-03
72GO:0004185: serine-type carboxypeptidase activity7.90E-03
73GO:0015198: oligopeptide transporter activity8.49E-03
74GO:0035091: phosphatidylinositol binding8.55E-03
75GO:0031072: heat shock protein binding9.29E-03
76GO:0000155: phosphorelay sensor kinase activity9.29E-03
77GO:0010329: auxin efflux transmembrane transporter activity9.29E-03
78GO:0008081: phosphoric diester hydrolase activity9.29E-03
79GO:0005315: inorganic phosphate transmembrane transporter activity9.29E-03
80GO:0051287: NAD binding9.58E-03
81GO:0003774: motor activity1.01E-02
82GO:0008146: sulfotransferase activity1.10E-02
83GO:0005528: FK506 binding1.27E-02
84GO:0052689: carboxylic ester hydrolase activity1.31E-02
85GO:0016740: transferase activity1.44E-02
86GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen1.60E-02
87GO:0022891: substrate-specific transmembrane transporter activity1.66E-02
88GO:0003729: mRNA binding1.89E-02
89GO:0019843: rRNA binding1.91E-02
90GO:0010181: FMN binding2.18E-02
91GO:0005525: GTP binding2.25E-02
92GO:0004872: receptor activity2.29E-02
93GO:0048038: quinone binding2.41E-02
94GO:0008017: microtubule binding2.76E-02
95GO:0016791: phosphatase activity2.76E-02
96GO:0016722: oxidoreductase activity, oxidizing metal ions2.88E-02
97GO:0016597: amino acid binding3.01E-02
98GO:0015250: water channel activity3.13E-02
99GO:0016168: chlorophyll binding3.26E-02
100GO:0042626: ATPase activity, coupled to transmembrane movement of substances3.35E-02
101GO:0005515: protein binding3.46E-02
102GO:0005096: GTPase activator activity3.92E-02
103GO:0008168: methyltransferase activity3.92E-02
104GO:0046982: protein heterodimerization activity4.00E-02
105GO:0016614: oxidoreductase activity, acting on CH-OH group of donors4.19E-02
106GO:0003746: translation elongation factor activity4.48E-02
107GO:0003993: acid phosphatase activity4.62E-02
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Gene type



Gene DE type