GO Enrichment Analysis of Co-expressed Genes with
AT5G24000
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042352: GDP-L-fucose salvage | 0.00E+00 |
| 2 | GO:0010059: positive regulation of atrichoblast fate specification | 0.00E+00 |
| 3 | GO:1900037: regulation of cellular response to hypoxia | 0.00E+00 |
| 4 | GO:0002103: endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | 0.00E+00 |
| 5 | GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process | 1.00E-04 |
| 6 | GO:0010063: positive regulation of trichoblast fate specification | 1.00E-04 |
| 7 | GO:0018026: peptidyl-lysine monomethylation | 2.36E-04 |
| 8 | GO:0006518: peptide metabolic process | 3.92E-04 |
| 9 | GO:0016556: mRNA modification | 5.64E-04 |
| 10 | GO:0010306: rhamnogalacturonan II biosynthetic process | 5.64E-04 |
| 11 | GO:0010071: root meristem specification | 5.64E-04 |
| 12 | GO:0042274: ribosomal small subunit biogenesis | 7.50E-04 |
| 13 | GO:0051322: anaphase | 7.50E-04 |
| 14 | GO:0006221: pyrimidine nucleotide biosynthetic process | 7.50E-04 |
| 15 | GO:0009828: plant-type cell wall loosening | 9.40E-04 |
| 16 | GO:0009616: virus induced gene silencing | 9.47E-04 |
| 17 | GO:0009107: lipoate biosynthetic process | 9.47E-04 |
| 18 | GO:0009451: RNA modification | 1.09E-03 |
| 19 | GO:0035194: posttranscriptional gene silencing by RNA | 1.16E-03 |
| 20 | GO:0042793: transcription from plastid promoter | 1.16E-03 |
| 21 | GO:0006014: D-ribose metabolic process | 1.16E-03 |
| 22 | GO:0050665: hydrogen peroxide biosynthetic process | 1.16E-03 |
| 23 | GO:0042026: protein refolding | 1.38E-03 |
| 24 | GO:1901259: chloroplast rRNA processing | 1.38E-03 |
| 25 | GO:0006458: 'de novo' protein folding | 1.38E-03 |
| 26 | GO:0009942: longitudinal axis specification | 1.38E-03 |
| 27 | GO:0009099: valine biosynthetic process | 1.38E-03 |
| 28 | GO:0009854: oxidative photosynthetic carbon pathway | 1.38E-03 |
| 29 | GO:0048528: post-embryonic root development | 1.62E-03 |
| 30 | GO:0048437: floral organ development | 1.62E-03 |
| 31 | GO:0015937: coenzyme A biosynthetic process | 1.62E-03 |
| 32 | GO:0009657: plastid organization | 2.14E-03 |
| 33 | GO:0019430: removal of superoxide radicals | 2.14E-03 |
| 34 | GO:0009097: isoleucine biosynthetic process | 2.14E-03 |
| 35 | GO:0010204: defense response signaling pathway, resistance gene-independent | 2.14E-03 |
| 36 | GO:0007389: pattern specification process | 2.14E-03 |
| 37 | GO:0000902: cell morphogenesis | 2.41E-03 |
| 38 | GO:0009098: leucine biosynthetic process | 2.70E-03 |
| 39 | GO:1900865: chloroplast RNA modification | 2.70E-03 |
| 40 | GO:0031425: chloroplast RNA processing | 2.70E-03 |
| 41 | GO:0009664: plant-type cell wall organization | 2.90E-03 |
| 42 | GO:0006259: DNA metabolic process | 3.00E-03 |
| 43 | GO:0010629: negative regulation of gene expression | 3.00E-03 |
| 44 | GO:0006535: cysteine biosynthetic process from serine | 3.00E-03 |
| 45 | GO:0045036: protein targeting to chloroplast | 3.00E-03 |
| 46 | GO:0006949: syncytium formation | 3.00E-03 |
| 47 | GO:0006265: DNA topological change | 3.31E-03 |
| 48 | GO:0045037: protein import into chloroplast stroma | 3.63E-03 |
| 49 | GO:0009691: cytokinin biosynthetic process | 3.95E-03 |
| 50 | GO:0019344: cysteine biosynthetic process | 5.37E-03 |
| 51 | GO:0019953: sexual reproduction | 5.75E-03 |
| 52 | GO:0061077: chaperone-mediated protein folding | 6.14E-03 |
| 53 | GO:0015992: proton transport | 6.14E-03 |
| 54 | GO:0016226: iron-sulfur cluster assembly | 6.54E-03 |
| 55 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 6.94E-03 |
| 56 | GO:0009411: response to UV | 6.94E-03 |
| 57 | GO:0010091: trichome branching | 7.35E-03 |
| 58 | GO:0042127: regulation of cell proliferation | 7.35E-03 |
| 59 | GO:0000226: microtubule cytoskeleton organization | 8.21E-03 |
| 60 | GO:0008033: tRNA processing | 8.21E-03 |
| 61 | GO:0010305: leaf vascular tissue pattern formation | 8.65E-03 |
| 62 | GO:0048868: pollen tube development | 8.65E-03 |
| 63 | GO:0007059: chromosome segregation | 9.10E-03 |
| 64 | GO:0019252: starch biosynthetic process | 9.56E-03 |
| 65 | GO:0009851: auxin biosynthetic process | 9.56E-03 |
| 66 | GO:0010583: response to cyclopentenone | 1.05E-02 |
| 67 | GO:0006457: protein folding | 1.13E-02 |
| 68 | GO:0009826: unidimensional cell growth | 1.14E-02 |
| 69 | GO:0010252: auxin homeostasis | 1.15E-02 |
| 70 | GO:0006464: cellular protein modification process | 1.15E-02 |
| 71 | GO:0000910: cytokinesis | 1.25E-02 |
| 72 | GO:0010027: thylakoid membrane organization | 1.30E-02 |
| 73 | GO:0048481: plant ovule development | 1.57E-02 |
| 74 | GO:0030154: cell differentiation | 2.21E-02 |
| 75 | GO:0008283: cell proliferation | 2.22E-02 |
| 76 | GO:0009926: auxin polar transport | 2.22E-02 |
| 77 | GO:0006397: mRNA processing | 2.26E-02 |
| 78 | GO:0006508: proteolysis | 2.56E-02 |
| 79 | GO:0051603: proteolysis involved in cellular protein catabolic process | 2.81E-02 |
| 80 | GO:0006357: regulation of transcription from RNA polymerase II promoter | 2.87E-02 |
| 81 | GO:0009734: auxin-activated signaling pathway | 3.05E-02 |
| 82 | GO:0048367: shoot system development | 3.17E-02 |
| 83 | GO:0006396: RNA processing | 3.61E-02 |
| 84 | GO:0009416: response to light stimulus | 3.84E-02 |
| 85 | GO:0042744: hydrogen peroxide catabolic process | 4.54E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0047341: fucose-1-phosphate guanylyltransferase activity | 0.00E+00 |
| 2 | GO:0050201: fucokinase activity | 0.00E+00 |
| 3 | GO:0004784: superoxide dismutase activity | 2.28E-05 |
| 4 | GO:0004632: phosphopantothenate--cysteine ligase activity | 1.00E-04 |
| 5 | GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity | 1.00E-04 |
| 6 | GO:0052381: tRNA dimethylallyltransferase activity | 1.00E-04 |
| 7 | GO:0016415: octanoyltransferase activity | 2.36E-04 |
| 8 | GO:0004047: aminomethyltransferase activity | 2.36E-04 |
| 9 | GO:0017118: lipoyltransferase activity | 2.36E-04 |
| 10 | GO:0052655: L-valine transaminase activity | 5.64E-04 |
| 11 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 5.64E-04 |
| 12 | GO:0009041: uridylate kinase activity | 5.64E-04 |
| 13 | GO:0009678: hydrogen-translocating pyrophosphatase activity | 5.64E-04 |
| 14 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 5.64E-04 |
| 15 | GO:0052656: L-isoleucine transaminase activity | 5.64E-04 |
| 16 | GO:0052654: L-leucine transaminase activity | 5.64E-04 |
| 17 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 5.64E-04 |
| 18 | GO:0001085: RNA polymerase II transcription factor binding | 6.40E-04 |
| 19 | GO:0004084: branched-chain-amino-acid transaminase activity | 7.50E-04 |
| 20 | GO:0004930: G-protein coupled receptor activity | 7.50E-04 |
| 21 | GO:0008891: glycolate oxidase activity | 7.50E-04 |
| 22 | GO:0004335: galactokinase activity | 7.50E-04 |
| 23 | GO:0016279: protein-lysine N-methyltransferase activity | 7.50E-04 |
| 24 | GO:0004519: endonuclease activity | 7.79E-04 |
| 25 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 9.47E-04 |
| 26 | GO:0004888: transmembrane signaling receptor activity | 9.47E-04 |
| 27 | GO:0004124: cysteine synthase activity | 1.38E-03 |
| 28 | GO:0004747: ribokinase activity | 1.38E-03 |
| 29 | GO:0004222: metalloendopeptidase activity | 1.58E-03 |
| 30 | GO:0004427: inorganic diphosphatase activity | 1.62E-03 |
| 31 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 1.65E-03 |
| 32 | GO:0008865: fructokinase activity | 1.87E-03 |
| 33 | GO:0003724: RNA helicase activity | 2.14E-03 |
| 34 | GO:0008173: RNA methyltransferase activity | 2.14E-03 |
| 35 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 2.14E-03 |
| 36 | GO:0009672: auxin:proton symporter activity | 2.70E-03 |
| 37 | GO:0044183: protein binding involved in protein folding | 3.31E-03 |
| 38 | GO:0010329: auxin efflux transmembrane transporter activity | 3.95E-03 |
| 39 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 4.30E-03 |
| 40 | GO:0003723: RNA binding | 4.65E-03 |
| 41 | GO:0004176: ATP-dependent peptidase activity | 6.14E-03 |
| 42 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 6.28E-03 |
| 43 | GO:0010181: FMN binding | 9.10E-03 |
| 44 | GO:0004518: nuclease activity | 1.05E-02 |
| 45 | GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity | 1.20E-02 |
| 46 | GO:0008237: metallopeptidase activity | 1.20E-02 |
| 47 | GO:0005200: structural constituent of cytoskeleton | 1.20E-02 |
| 48 | GO:0003682: chromatin binding | 1.25E-02 |
| 49 | GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting | 1.76E-02 |
| 50 | GO:0003746: translation elongation factor activity | 1.86E-02 |
| 51 | GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding | 1.96E-02 |
| 52 | GO:0004185: serine-type carboxypeptidase activity | 2.22E-02 |
| 53 | GO:0003690: double-stranded DNA binding | 2.81E-02 |
| 54 | GO:0016887: ATPase activity | 3.36E-02 |
| 55 | GO:0051082: unfolded protein binding | 3.53E-02 |
| 56 | GO:0008026: ATP-dependent helicase activity | 3.68E-02 |
| 57 | GO:0019843: rRNA binding | 4.14E-02 |
| 58 | GO:0005524: ATP binding | 4.44E-02 |
| 59 | GO:0016740: transferase activity | 4.67E-02 |
| 60 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 4.95E-02 |