Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G23920

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0019265: glycine biosynthetic process, by transamination of glyoxylate0.00E+00
2GO:0046471: phosphatidylglycerol metabolic process0.00E+00
3GO:0010207: photosystem II assembly9.44E-10
4GO:0015979: photosynthesis6.01E-07
5GO:0009773: photosynthetic electron transport in photosystem I4.39E-06
6GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly6.84E-06
7GO:0009768: photosynthesis, light harvesting in photosystem I1.84E-05
8GO:0042549: photosystem II stabilization3.20E-05
9GO:0006810: transport3.77E-05
10GO:0010189: vitamin E biosynthetic process4.51E-05
11GO:0009645: response to low light intensity stimulus6.07E-05
12GO:0015995: chlorophyll biosynthetic process1.47E-04
13GO:0018298: protein-chromophore linkage1.70E-04
14GO:0009767: photosynthetic electron transport chain2.71E-04
15GO:0035304: regulation of protein dephosphorylation2.86E-04
16GO:0008616: queuosine biosynthetic process2.86E-04
17GO:0071457: cellular response to ozone2.86E-04
18GO:0009735: response to cytokinin4.38E-04
19GO:0006518: peptide metabolic process4.72E-04
20GO:0044375: regulation of peroxisome size4.72E-04
21GO:1901332: negative regulation of lateral root development6.76E-04
22GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis6.76E-04
23GO:0071484: cellular response to light intensity6.76E-04
24GO:0071486: cellular response to high light intensity8.97E-04
25GO:0009765: photosynthesis, light harvesting8.97E-04
26GO:0015994: chlorophyll metabolic process8.97E-04
27GO:0006536: glutamate metabolic process8.97E-04
28GO:0009107: lipoate biosynthetic process1.13E-03
29GO:0071493: cellular response to UV-B1.13E-03
30GO:0043097: pyrimidine nucleoside salvage1.13E-03
31GO:0010190: cytochrome b6f complex assembly1.39E-03
32GO:0006206: pyrimidine nucleobase metabolic process1.39E-03
33GO:0045926: negative regulation of growth1.66E-03
34GO:1900057: positive regulation of leaf senescence1.95E-03
35GO:0010218: response to far red light2.07E-03
36GO:0016559: peroxisome fission2.26E-03
37GO:0009637: response to blue light2.38E-03
38GO:0019430: removal of superoxide radicals2.58E-03
39GO:0032544: plastid translation2.58E-03
40GO:0009658: chloroplast organization2.60E-03
41GO:0042254: ribosome biogenesis2.66E-03
42GO:0006783: heme biosynthetic process2.91E-03
43GO:0010114: response to red light3.06E-03
44GO:0010205: photoinhibition3.26E-03
45GO:0006779: porphyrin-containing compound biosynthetic process3.26E-03
46GO:0009644: response to high light intensity3.30E-03
47GO:0006782: protoporphyrinogen IX biosynthetic process3.62E-03
48GO:0019684: photosynthesis, light reaction4.00E-03
49GO:0018119: peptidyl-cysteine S-nitrosylation4.00E-03
50GO:0006094: gluconeogenesis4.79E-03
51GO:0006807: nitrogen compound metabolic process4.79E-03
52GO:0019253: reductive pentose-phosphate cycle5.20E-03
53GO:0032259: methylation5.30E-03
54GO:0007031: peroxisome organization5.63E-03
55GO:0006636: unsaturated fatty acid biosynthetic process6.06E-03
56GO:0055114: oxidation-reduction process6.40E-03
57GO:0030433: ubiquitin-dependent ERAD pathway7.93E-03
58GO:0019722: calcium-mediated signaling8.93E-03
59GO:0009741: response to brassinosteroid1.05E-02
60GO:0071472: cellular response to salt stress1.05E-02
61GO:0006412: translation1.08E-02
62GO:0009409: response to cold1.15E-02
63GO:0010583: response to cyclopentenone1.28E-02
64GO:0030163: protein catabolic process1.34E-02
65GO:0007267: cell-cell signaling1.46E-02
66GO:0042128: nitrate assimilation1.71E-02
67GO:0009817: defense response to fungus, incompatible interaction1.91E-02
68GO:0010311: lateral root formation1.98E-02
69GO:0009853: photorespiration2.26E-02
70GO:0030001: metal ion transport2.48E-02
71GO:0000209: protein polyubiquitination2.79E-02
72GO:0006979: response to oxidative stress2.85E-02
73GO:0006096: glycolytic process3.78E-02
74GO:0009734: auxin-activated signaling pathway4.03E-02
75GO:0009742: brassinosteroid mediated signaling pathway4.49E-02
RankGO TermAdjusted P value
1GO:0045550: geranylgeranyl reductase activity0.00E+00
2GO:0008974: phosphoribulokinase activity0.00E+00
3GO:0046408: chlorophyll synthetase activity0.00E+00
4GO:0008942: nitrite reductase [NAD(P)H] activity0.00E+00
5GO:0050342: tocopherol O-methyltransferase activity0.00E+00
6GO:0050281: serine-glyoxylate transaminase activity0.00E+00
7GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity0.00E+00
8GO:0046863: ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity0.00E+00
9GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors0.00E+00
10GO:0004760: serine-pyruvate transaminase activity0.00E+00
11GO:0048038: quinone binding1.98E-06
12GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor1.29E-05
13GO:0031409: pigment binding1.30E-05
14GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity1.23E-04
15GO:0010242: oxygen evolving activity1.23E-04
16GO:0016168: chlorophyll binding1.26E-04
17GO:0018708: thiol S-methyltransferase activity2.86E-04
18GO:0008883: glutamyl-tRNA reductase activity2.86E-04
19GO:0047746: chlorophyllase activity2.86E-04
20GO:0008479: queuine tRNA-ribosyltransferase activity2.86E-04
21GO:0016992: lipoate synthase activity4.72E-04
22GO:0008097: 5S rRNA binding6.76E-04
23GO:0004351: glutamate decarboxylase activity6.76E-04
24GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor6.76E-04
25GO:0008453: alanine-glyoxylate transaminase activity8.97E-04
26GO:0004332: fructose-bisphosphate aldolase activity1.39E-03
27GO:0004784: superoxide dismutase activity1.39E-03
28GO:0003735: structural constituent of ribosome1.63E-03
29GO:0004849: uridine kinase activity1.66E-03
30GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity1.66E-03
31GO:0042802: identical protein binding2.03E-03
32GO:0051537: 2 iron, 2 sulfur cluster binding3.30E-03
33GO:0030234: enzyme regulator activity3.62E-03
34GO:0031072: heat shock protein binding4.79E-03
35GO:0008266: poly(U) RNA binding5.20E-03
36GO:0009055: electron carrier activity6.12E-03
37GO:0005528: FK506 binding6.51E-03
38GO:0019843: rRNA binding7.30E-03
39GO:0016491: oxidoreductase activity1.10E-02
40GO:0008168: methyltransferase activity1.51E-02
41GO:0005515: protein binding1.80E-02
42GO:0004222: metalloendopeptidase activity2.05E-02
43GO:0003746: translation elongation factor activity2.26E-02
44GO:0003993: acid phosphatase activity2.34E-02
45GO:0050661: NADP binding2.48E-02
46GO:0003755: peptidyl-prolyl cis-trans isomerase activity3.03E-02
47GO:0003690: double-stranded DNA binding3.44E-02
48GO:0031625: ubiquitin protein ligase binding3.60E-02
49GO:0051082: unfolded protein binding4.31E-02
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Gene type



Gene DE type