GO Enrichment Analysis of Co-expressed Genes with
AT5G23360
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009606: tropism | 0.00E+00 |
| 2 | GO:0007638: mechanosensory behavior | 0.00E+00 |
| 3 | GO:1903224: regulation of endodermal cell differentiation | 0.00E+00 |
| 4 | GO:0097164: ammonium ion metabolic process | 0.00E+00 |
| 5 | GO:0045184: establishment of protein localization | 0.00E+00 |
| 6 | GO:0006003: fructose 2,6-bisphosphate metabolic process | 0.00E+00 |
| 7 | GO:0015843: methylammonium transport | 0.00E+00 |
| 8 | GO:0031222: arabinan catabolic process | 0.00E+00 |
| 9 | GO:0070979: protein K11-linked ubiquitination | 0.00E+00 |
| 10 | GO:0046719: regulation by virus of viral protein levels in host cell | 0.00E+00 |
| 11 | GO:0046620: regulation of organ growth | 3.41E-09 |
| 12 | GO:0009734: auxin-activated signaling pathway | 1.05E-06 |
| 13 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 3.52E-06 |
| 14 | GO:0009733: response to auxin | 4.57E-06 |
| 15 | GO:0009926: auxin polar transport | 7.42E-06 |
| 16 | GO:0051513: regulation of monopolar cell growth | 7.03E-05 |
| 17 | GO:2000038: regulation of stomatal complex development | 1.23E-04 |
| 18 | GO:0032876: negative regulation of DNA endoreduplication | 1.89E-04 |
| 19 | GO:0090558: plant epidermis development | 4.64E-04 |
| 20 | GO:0010480: microsporocyte differentiation | 4.64E-04 |
| 21 | GO:0035987: endodermal cell differentiation | 4.64E-04 |
| 22 | GO:0043609: regulation of carbon utilization | 4.64E-04 |
| 23 | GO:0006436: tryptophanyl-tRNA aminoacylation | 4.64E-04 |
| 24 | GO:0000066: mitochondrial ornithine transport | 4.64E-04 |
| 25 | GO:0042659: regulation of cell fate specification | 4.64E-04 |
| 26 | GO:0007389: pattern specification process | 7.02E-04 |
| 27 | GO:0006468: protein phosphorylation | 7.81E-04 |
| 28 | GO:0000373: Group II intron splicing | 8.40E-04 |
| 29 | GO:0010569: regulation of double-strand break repair via homologous recombination | 1.00E-03 |
| 30 | GO:0070981: L-asparagine biosynthetic process | 1.00E-03 |
| 31 | GO:0018026: peptidyl-lysine monomethylation | 1.00E-03 |
| 32 | GO:0006423: cysteinyl-tRNA aminoacylation | 1.00E-03 |
| 33 | GO:0071497: cellular response to freezing | 1.00E-03 |
| 34 | GO:1900033: negative regulation of trichome patterning | 1.00E-03 |
| 35 | GO:0009786: regulation of asymmetric cell division | 1.00E-03 |
| 36 | GO:0006529: asparagine biosynthetic process | 1.00E-03 |
| 37 | GO:2000123: positive regulation of stomatal complex development | 1.00E-03 |
| 38 | GO:0010252: auxin homeostasis | 1.13E-03 |
| 39 | GO:0031145: anaphase-promoting complex-dependent catabolic process | 1.63E-03 |
| 40 | GO:0001578: microtubule bundle formation | 1.63E-03 |
| 41 | GO:0090708: specification of plant organ axis polarity | 1.63E-03 |
| 42 | GO:0006000: fructose metabolic process | 1.63E-03 |
| 43 | GO:0009767: photosynthetic electron transport chain | 1.73E-03 |
| 44 | GO:2000012: regulation of auxin polar transport | 1.73E-03 |
| 45 | GO:0000160: phosphorelay signal transduction system | 2.10E-03 |
| 46 | GO:0015696: ammonium transport | 2.37E-03 |
| 47 | GO:0046739: transport of virus in multicellular host | 2.37E-03 |
| 48 | GO:2000904: regulation of starch metabolic process | 2.37E-03 |
| 49 | GO:0031048: chromatin silencing by small RNA | 2.37E-03 |
| 50 | GO:0043572: plastid fission | 2.37E-03 |
| 51 | GO:1902476: chloride transmembrane transport | 2.37E-03 |
| 52 | GO:0007231: osmosensory signaling pathway | 2.37E-03 |
| 53 | GO:0030071: regulation of mitotic metaphase/anaphase transition | 2.37E-03 |
| 54 | GO:0051639: actin filament network formation | 2.37E-03 |
| 55 | GO:0044211: CTP salvage | 2.37E-03 |
| 56 | GO:0019048: modulation by virus of host morphology or physiology | 2.37E-03 |
| 57 | GO:0009800: cinnamic acid biosynthetic process | 2.37E-03 |
| 58 | GO:0006418: tRNA aminoacylation for protein translation | 2.99E-03 |
| 59 | GO:0030104: water homeostasis | 3.18E-03 |
| 60 | GO:0033500: carbohydrate homeostasis | 3.18E-03 |
| 61 | GO:0051567: histone H3-K9 methylation | 3.18E-03 |
| 62 | GO:0044206: UMP salvage | 3.18E-03 |
| 63 | GO:1901141: regulation of lignin biosynthetic process | 3.18E-03 |
| 64 | GO:0048629: trichome patterning | 3.18E-03 |
| 65 | GO:0051764: actin crosslink formation | 3.18E-03 |
| 66 | GO:0051322: anaphase | 3.18E-03 |
| 67 | GO:0072488: ammonium transmembrane transport | 3.18E-03 |
| 68 | GO:0022622: root system development | 3.18E-03 |
| 69 | GO:0016998: cell wall macromolecule catabolic process | 3.28E-03 |
| 70 | GO:0006306: DNA methylation | 3.28E-03 |
| 71 | GO:0040008: regulation of growth | 3.68E-03 |
| 72 | GO:0010082: regulation of root meristem growth | 3.92E-03 |
| 73 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 3.92E-03 |
| 74 | GO:1902183: regulation of shoot apical meristem development | 4.08E-03 |
| 75 | GO:0016123: xanthophyll biosynthetic process | 4.08E-03 |
| 76 | GO:0010438: cellular response to sulfur starvation | 4.08E-03 |
| 77 | GO:0010158: abaxial cell fate specification | 4.08E-03 |
| 78 | GO:0030308: negative regulation of cell growth | 4.08E-03 |
| 79 | GO:0010375: stomatal complex patterning | 4.08E-03 |
| 80 | GO:0009739: response to gibberellin | 4.69E-03 |
| 81 | GO:0009416: response to light stimulus | 4.73E-03 |
| 82 | GO:0042793: transcription from plastid promoter | 5.05E-03 |
| 83 | GO:0010315: auxin efflux | 5.05E-03 |
| 84 | GO:0006559: L-phenylalanine catabolic process | 5.05E-03 |
| 85 | GO:0006206: pyrimidine nucleobase metabolic process | 5.05E-03 |
| 86 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 5.05E-03 |
| 87 | GO:0016458: gene silencing | 5.05E-03 |
| 88 | GO:0010405: arabinogalactan protein metabolic process | 5.05E-03 |
| 89 | GO:0006655: phosphatidylglycerol biosynthetic process | 5.05E-03 |
| 90 | GO:0006342: chromatin silencing | 5.39E-03 |
| 91 | GO:0009958: positive gravitropism | 5.39E-03 |
| 92 | GO:0009736: cytokinin-activated signaling pathway | 5.41E-03 |
| 93 | GO:0010067: procambium histogenesis | 6.09E-03 |
| 94 | GO:0009942: longitudinal axis specification | 6.09E-03 |
| 95 | GO:0030488: tRNA methylation | 6.09E-03 |
| 96 | GO:2000037: regulation of stomatal complex patterning | 6.09E-03 |
| 97 | GO:2000067: regulation of root morphogenesis | 6.09E-03 |
| 98 | GO:0006821: chloride transport | 7.20E-03 |
| 99 | GO:0030307: positive regulation of cell growth | 7.20E-03 |
| 100 | GO:0010103: stomatal complex morphogenesis | 7.20E-03 |
| 101 | GO:0032880: regulation of protein localization | 7.20E-03 |
| 102 | GO:0009610: response to symbiotic fungus | 7.20E-03 |
| 103 | GO:0006955: immune response | 7.20E-03 |
| 104 | GO:0010050: vegetative phase change | 7.20E-03 |
| 105 | GO:0048437: floral organ development | 7.20E-03 |
| 106 | GO:0030154: cell differentiation | 8.08E-03 |
| 107 | GO:0009828: plant-type cell wall loosening | 8.09E-03 |
| 108 | GO:0010439: regulation of glucosinolate biosynthetic process | 8.39E-03 |
| 109 | GO:0001522: pseudouridine synthesis | 8.39E-03 |
| 110 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 8.39E-03 |
| 111 | GO:0009850: auxin metabolic process | 8.39E-03 |
| 112 | GO:0042255: ribosome assembly | 8.39E-03 |
| 113 | GO:0048766: root hair initiation | 8.39E-03 |
| 114 | GO:0032875: regulation of DNA endoreduplication | 8.39E-03 |
| 115 | GO:0055075: potassium ion homeostasis | 8.39E-03 |
| 116 | GO:0051607: defense response to virus | 9.13E-03 |
| 117 | GO:0010497: plasmodesmata-mediated intercellular transport | 9.63E-03 |
| 118 | GO:0006002: fructose 6-phosphate metabolic process | 9.63E-03 |
| 119 | GO:0009827: plant-type cell wall modification | 9.63E-03 |
| 120 | GO:0010027: thylakoid membrane organization | 9.68E-03 |
| 121 | GO:2000024: regulation of leaf development | 1.09E-02 |
| 122 | GO:0000902: cell morphogenesis | 1.09E-02 |
| 123 | GO:0009051: pentose-phosphate shunt, oxidative branch | 1.09E-02 |
| 124 | GO:0010411: xyloglucan metabolic process | 1.14E-02 |
| 125 | GO:2000280: regulation of root development | 1.23E-02 |
| 126 | GO:1900865: chloroplast RNA modification | 1.23E-02 |
| 127 | GO:0031425: chloroplast RNA processing | 1.23E-02 |
| 128 | GO:0009638: phototropism | 1.23E-02 |
| 129 | GO:0042761: very long-chain fatty acid biosynthetic process | 1.23E-02 |
| 130 | GO:0048481: plant ovule development | 1.27E-02 |
| 131 | GO:0006535: cysteine biosynthetic process from serine | 1.37E-02 |
| 132 | GO:0030422: production of siRNA involved in RNA interference | 1.37E-02 |
| 133 | GO:0048829: root cap development | 1.37E-02 |
| 134 | GO:0006949: syncytium formation | 1.37E-02 |
| 135 | GO:0006259: DNA metabolic process | 1.37E-02 |
| 136 | GO:0009682: induced systemic resistance | 1.52E-02 |
| 137 | GO:0006265: DNA topological change | 1.52E-02 |
| 138 | GO:0048229: gametophyte development | 1.52E-02 |
| 139 | GO:0010015: root morphogenesis | 1.52E-02 |
| 140 | GO:0006816: calcium ion transport | 1.52E-02 |
| 141 | GO:0016024: CDP-diacylglycerol biosynthetic process | 1.68E-02 |
| 142 | GO:0010582: floral meristem determinacy | 1.68E-02 |
| 143 | GO:0008361: regulation of cell size | 1.68E-02 |
| 144 | GO:0006839: mitochondrial transport | 1.84E-02 |
| 145 | GO:0009785: blue light signaling pathway | 1.84E-02 |
| 146 | GO:0009691: cytokinin biosynthetic process | 1.84E-02 |
| 147 | GO:0006006: glucose metabolic process | 1.84E-02 |
| 148 | GO:0010075: regulation of meristem growth | 1.84E-02 |
| 149 | GO:0071555: cell wall organization | 1.86E-02 |
| 150 | GO:0010207: photosystem II assembly | 2.00E-02 |
| 151 | GO:0010020: chloroplast fission | 2.00E-02 |
| 152 | GO:0010223: secondary shoot formation | 2.00E-02 |
| 153 | GO:0009934: regulation of meristem structural organization | 2.00E-02 |
| 154 | GO:0006541: glutamine metabolic process | 2.00E-02 |
| 155 | GO:0048364: root development | 2.04E-02 |
| 156 | GO:0042546: cell wall biogenesis | 2.16E-02 |
| 157 | GO:0090351: seedling development | 2.17E-02 |
| 158 | GO:0070588: calcium ion transmembrane transport | 2.17E-02 |
| 159 | GO:0006863: purine nucleobase transport | 2.35E-02 |
| 160 | GO:0006071: glycerol metabolic process | 2.35E-02 |
| 161 | GO:0006833: water transport | 2.35E-02 |
| 162 | GO:0080147: root hair cell development | 2.53E-02 |
| 163 | GO:0051017: actin filament bundle assembly | 2.53E-02 |
| 164 | GO:0005992: trehalose biosynthetic process | 2.53E-02 |
| 165 | GO:0019344: cysteine biosynthetic process | 2.53E-02 |
| 166 | GO:0009944: polarity specification of adaxial/abaxial axis | 2.53E-02 |
| 167 | GO:0009664: plant-type cell wall organization | 2.61E-02 |
| 168 | GO:0010073: meristem maintenance | 2.71E-02 |
| 169 | GO:0006825: copper ion transport | 2.71E-02 |
| 170 | GO:0051302: regulation of cell division | 2.71E-02 |
| 171 | GO:0007275: multicellular organism development | 2.79E-02 |
| 172 | GO:0009826: unidimensional cell growth | 2.82E-02 |
| 173 | GO:0006357: regulation of transcription from RNA polymerase II promoter | 2.91E-02 |
| 174 | GO:0009658: chloroplast organization | 2.96E-02 |
| 175 | GO:0006730: one-carbon metabolic process | 3.09E-02 |
| 176 | GO:0031348: negative regulation of defense response | 3.09E-02 |
| 177 | GO:0019748: secondary metabolic process | 3.09E-02 |
| 178 | GO:0009686: gibberellin biosynthetic process | 3.29E-02 |
| 179 | GO:0001944: vasculature development | 3.29E-02 |
| 180 | GO:0009625: response to insect | 3.29E-02 |
| 181 | GO:0010089: xylem development | 3.49E-02 |
| 182 | GO:0045492: xylan biosynthetic process | 3.49E-02 |
| 183 | GO:0009723: response to ethylene | 3.55E-02 |
| 184 | GO:0008284: positive regulation of cell proliferation | 3.70E-02 |
| 185 | GO:0080167: response to karrikin | 3.86E-02 |
| 186 | GO:0008033: tRNA processing | 3.91E-02 |
| 187 | GO:0010087: phloem or xylem histogenesis | 3.91E-02 |
| 188 | GO:0048653: anther development | 3.91E-02 |
| 189 | GO:0042631: cellular response to water deprivation | 3.91E-02 |
| 190 | GO:0000226: microtubule cytoskeleton organization | 3.91E-02 |
| 191 | GO:0009741: response to brassinosteroid | 4.12E-02 |
| 192 | GO:0010268: brassinosteroid homeostasis | 4.12E-02 |
| 193 | GO:0009742: brassinosteroid mediated signaling pathway | 4.22E-02 |
| 194 | GO:0048544: recognition of pollen | 4.34E-02 |
| 195 | GO:0007059: chromosome segregation | 4.34E-02 |
| 196 | GO:0009646: response to absence of light | 4.34E-02 |
| 197 | GO:0008654: phospholipid biosynthetic process | 4.56E-02 |
| 198 | GO:0071554: cell wall organization or biogenesis | 4.78E-02 |
| 199 | GO:0016132: brassinosteroid biosynthetic process | 4.78E-02 |
| 200 | GO:0080156: mitochondrial mRNA modification | 4.78E-02 |
| 201 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 4.78E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity | 0.00E+00 |
| 2 | GO:0003873: 6-phosphofructo-2-kinase activity | 0.00E+00 |
| 3 | GO:0004056: argininosuccinate lyase activity | 0.00E+00 |
| 4 | GO:0001872: (1->3)-beta-D-glucan binding | 7.03E-05 |
| 5 | GO:0004674: protein serine/threonine kinase activity | 1.19E-04 |
| 6 | GO:0005290: L-histidine transmembrane transporter activity | 4.64E-04 |
| 7 | GO:0004008: copper-exporting ATPase activity | 4.64E-04 |
| 8 | GO:0003867: 4-aminobutyrate transaminase activity | 4.64E-04 |
| 9 | GO:0004071: aspartate-ammonia ligase activity | 4.64E-04 |
| 10 | GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity | 4.64E-04 |
| 11 | GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity | 4.64E-04 |
| 12 | GO:0052381: tRNA dimethylallyltransferase activity | 4.64E-04 |
| 13 | GO:0004830: tryptophan-tRNA ligase activity | 4.64E-04 |
| 14 | GO:0042834: peptidoglycan binding | 4.64E-04 |
| 15 | GO:0051777: ent-kaurenoate oxidase activity | 4.64E-04 |
| 16 | GO:0009672: auxin:proton symporter activity | 9.90E-04 |
| 17 | GO:0008805: carbon-monoxide oxygenase activity | 1.00E-03 |
| 18 | GO:0000064: L-ornithine transmembrane transporter activity | 1.00E-03 |
| 19 | GO:0015929: hexosaminidase activity | 1.00E-03 |
| 20 | GO:0004563: beta-N-acetylhexosaminidase activity | 1.00E-03 |
| 21 | GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity | 1.00E-03 |
| 22 | GO:0050017: L-3-cyanoalanine synthase activity | 1.00E-03 |
| 23 | GO:0004817: cysteine-tRNA ligase activity | 1.00E-03 |
| 24 | GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity | 1.00E-03 |
| 25 | GO:0000156: phosphorelay response regulator activity | 1.04E-03 |
| 26 | GO:0045548: phenylalanine ammonia-lyase activity | 1.63E-03 |
| 27 | GO:0016805: dipeptidase activity | 1.63E-03 |
| 28 | GO:0070330: aromatase activity | 1.63E-03 |
| 29 | GO:0017150: tRNA dihydrouridine synthase activity | 1.63E-03 |
| 30 | GO:0010329: auxin efflux transmembrane transporter activity | 1.73E-03 |
| 31 | GO:0015181: arginine transmembrane transporter activity | 2.37E-03 |
| 32 | GO:0035197: siRNA binding | 2.37E-03 |
| 33 | GO:0015189: L-lysine transmembrane transporter activity | 2.37E-03 |
| 34 | GO:0005345: purine nucleobase transmembrane transporter activity | 2.99E-03 |
| 35 | GO:0019199: transmembrane receptor protein kinase activity | 3.18E-03 |
| 36 | GO:0005253: anion channel activity | 3.18E-03 |
| 37 | GO:0046556: alpha-L-arabinofuranosidase activity | 3.18E-03 |
| 38 | GO:0016279: protein-lysine N-methyltransferase activity | 3.18E-03 |
| 39 | GO:0004845: uracil phosphoribosyltransferase activity | 3.18E-03 |
| 40 | GO:0004345: glucose-6-phosphate dehydrogenase activity | 3.18E-03 |
| 41 | GO:0018685: alkane 1-monooxygenase activity | 4.08E-03 |
| 42 | GO:0070696: transmembrane receptor protein serine/threonine kinase binding | 4.08E-03 |
| 43 | GO:0003727: single-stranded RNA binding | 4.27E-03 |
| 44 | GO:0004812: aminoacyl-tRNA ligase activity | 4.62E-03 |
| 45 | GO:0008519: ammonium transmembrane transporter activity | 5.05E-03 |
| 46 | GO:0005247: voltage-gated chloride channel activity | 5.05E-03 |
| 47 | GO:2001070: starch binding | 5.05E-03 |
| 48 | GO:0004605: phosphatidate cytidylyltransferase activity | 5.05E-03 |
| 49 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 5.05E-03 |
| 50 | GO:0004672: protein kinase activity | 5.82E-03 |
| 51 | GO:0016832: aldehyde-lyase activity | 6.09E-03 |
| 52 | GO:0004849: uridine kinase activity | 6.09E-03 |
| 53 | GO:0004656: procollagen-proline 4-dioxygenase activity | 6.09E-03 |
| 54 | GO:0004124: cysteine synthase activity | 6.09E-03 |
| 55 | GO:0008195: phosphatidate phosphatase activity | 6.09E-03 |
| 56 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 6.09E-03 |
| 57 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 6.67E-03 |
| 58 | GO:0016301: kinase activity | 6.93E-03 |
| 59 | GO:0004650: polygalacturonase activity | 7.57E-03 |
| 60 | GO:0005375: copper ion transmembrane transporter activity | 9.63E-03 |
| 61 | GO:0008173: RNA methyltransferase activity | 9.63E-03 |
| 62 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 9.63E-03 |
| 63 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 1.09E-02 |
| 64 | GO:0030247: polysaccharide binding | 1.14E-02 |
| 65 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 1.14E-02 |
| 66 | GO:0016829: lyase activity | 1.25E-02 |
| 67 | GO:0004805: trehalose-phosphatase activity | 1.37E-02 |
| 68 | GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting | 1.40E-02 |
| 69 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 1.52E-02 |
| 70 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 1.61E-02 |
| 71 | GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding | 1.65E-02 |
| 72 | GO:0004521: endoribonuclease activity | 1.68E-02 |
| 73 | GO:0004022: alcohol dehydrogenase (NAD) activity | 1.84E-02 |
| 74 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 1.84E-02 |
| 75 | GO:0004089: carbonate dehydratase activity | 1.84E-02 |
| 76 | GO:0005262: calcium channel activity | 1.84E-02 |
| 77 | GO:0009982: pseudouridine synthase activity | 1.84E-02 |
| 78 | GO:0008083: growth factor activity | 2.00E-02 |
| 79 | GO:0005524: ATP binding | 2.26E-02 |
| 80 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 2.40E-02 |
| 81 | GO:0031418: L-ascorbic acid binding | 2.53E-02 |
| 82 | GO:0004176: ATP-dependent peptidase activity | 2.90E-02 |
| 83 | GO:0033612: receptor serine/threonine kinase binding | 2.90E-02 |
| 84 | GO:0008408: 3'-5' exonuclease activity | 2.90E-02 |
| 85 | GO:0035251: UDP-glucosyltransferase activity | 2.90E-02 |
| 86 | GO:0022891: substrate-specific transmembrane transporter activity | 3.29E-02 |
| 87 | GO:0004527: exonuclease activity | 4.12E-02 |
| 88 | GO:0001085: RNA polymerase II transcription factor binding | 4.12E-02 |
| 89 | GO:0019901: protein kinase binding | 4.56E-02 |
| 90 | GO:0043565: sequence-specific DNA binding | 4.60E-02 |