co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G23310

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0019988: charged-tRNA amino acid modification	0.00E+00
2	GO:0090615: mitochondrial mRNA processing	0.00E+00
3	GO:0042794: rRNA transcription from plastid promoter	0.00E+00
4	GO:0010323: negative regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	0.00E+00
5	GO:0045014: negative regulation of transcription by glucose	0.00E+00
6	GO:0010059: positive regulation of atrichoblast fate specification	0.00E+00
7	GO:0090627: plant epidermal cell differentiation	0.00E+00
8	GO:0009606: tropism	0.00E+00
9	GO:0090322: regulation of superoxide metabolic process	0.00E+00
10	GO:1901528: hydrogen peroxide mediated signaling pathway involved in stomatal movement	0.00E+00
11	GO:0080127: fruit septum development	0.00E+00
12	GO:0002103: endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	0.00E+00
13	GO:0046486: glycerolipid metabolic process	0.00E+00
14	GO:0042793: transcription from plastid promoter	6.15E-08
15	GO:0009658: chloroplast organization	2.02E-06
16	GO:0009451: RNA modification	4.07E-06
17	GO:0006518: peptide metabolic process	3.74E-05
18	GO:0006479: protein methylation	1.39E-04
19	GO:0006364: rRNA processing	2.05E-04
20	GO:0048497: maintenance of floral organ identity	2.13E-04
21	GO:0009913: epidermal cell differentiation	3.01E-04
22	GO:1901259: chloroplast rRNA processing	4.02E-04
23	GO:0034757: negative regulation of iron ion transport	5.00E-04
24	GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process	5.00E-04
25	GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic	5.00E-04
26	GO:1905039: carboxylic acid transmembrane transport	5.00E-04
27	GO:0080112: seed growth	5.00E-04
28	GO:1905200: gibberellic acid transmembrane transport	5.00E-04
29	GO:1903866: palisade mesophyll development	5.00E-04
30	GO:0010063: positive regulation of trichoblast fate specification	5.00E-04
31	GO:0006401: RNA catabolic process	5.16E-04
32	GO:0042127: regulation of cell proliferation	5.79E-04
33	GO:0042255: ribosome assembly	6.43E-04
34	GO:0046620: regulation of organ growth	6.43E-04
35	GO:0006353: DNA-templated transcription, termination	6.43E-04
36	GO:0008033: tRNA processing	7.10E-04
37	GO:0010305: leaf vascular tissue pattern formation	7.81E-04
38	GO:0007389: pattern specification process	7.83E-04
39	GO:0000373: Group II intron splicing	9.36E-04
40	GO:0080156: mitochondrial mRNA modification	1.02E-03
41	GO:1901529: positive regulation of anion channel activity	1.08E-03
42	GO:0009967: positive regulation of signal transduction	1.08E-03
43	GO:0048255: mRNA stabilization	1.08E-03
44	GO:0019374: galactolipid metabolic process	1.08E-03
45	GO:1902326: positive regulation of chlorophyll biosynthetic process	1.08E-03
46	GO:0010569: regulation of double-strand break repair via homologous recombination	1.08E-03
47	GO:0010271: regulation of chlorophyll catabolic process	1.08E-03
48	GO:0048731: system development	1.08E-03
49	GO:0010541: acropetal auxin transport	1.08E-03
50	GO:0018026: peptidyl-lysine monomethylation	1.08E-03
51	GO:0006650: glycerophospholipid metabolic process	1.08E-03
52	GO:2000071: regulation of defense response by callose deposition	1.08E-03
53	GO:0009662: etioplast organization	1.08E-03
54	GO:1900033: negative regulation of trichome patterning	1.08E-03
55	GO:0009220: pyrimidine ribonucleotide biosynthetic process	1.08E-03
56	GO:1904143: positive regulation of carotenoid biosynthetic process	1.08E-03
57	GO:0080009: mRNA methylation	1.08E-03
58	GO:1900865: chloroplast RNA modification	1.10E-03
59	GO:0009734: auxin-activated signaling pathway	1.11E-03
60	GO:0006949: syncytium formation	1.28E-03
61	GO:0006535: cysteine biosynthetic process from serine	1.28E-03
62	GO:0048829: root cap development	1.28E-03
63	GO:0009828: plant-type cell wall loosening	1.29E-03
64	GO:0009793: embryo development ending in seed dormancy	1.48E-03
65	GO:0048367: shoot system development	1.60E-03
66	GO:0045037: protein import into chloroplast stroma	1.70E-03
67	GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic	1.76E-03
68	GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement	1.76E-03
69	GO:0080117: secondary growth	1.76E-03
70	GO:0046168: glycerol-3-phosphate catabolic process	1.76E-03
71	GO:0090391: granum assembly	1.76E-03
72	GO:0042780: tRNA 3'-end processing	1.76E-03
73	GO:0001578: microtubule bundle formation	1.76E-03
74	GO:0010588: cotyledon vascular tissue pattern formation	1.93E-03
75	GO:0080188: RNA-directed DNA methylation	2.45E-03
76	GO:0010371: regulation of gibberellin biosynthetic process	2.56E-03
77	GO:1902476: chloride transmembrane transport	2.56E-03
78	GO:0010071: root meristem specification	2.56E-03
79	GO:0010239: chloroplast mRNA processing	2.56E-03
80	GO:0007276: gamete generation	2.56E-03
81	GO:0010306: rhamnogalacturonan II biosynthetic process	2.56E-03
82	GO:0006072: glycerol-3-phosphate metabolic process	2.56E-03
83	GO:0045017: glycerolipid biosynthetic process	2.56E-03
84	GO:0019344: cysteine biosynthetic process	3.03E-03
85	GO:0048629: trichome patterning	3.44E-03
86	GO:1900864: mitochondrial RNA modification	3.44E-03
87	GO:0051322: anaphase	3.44E-03
88	GO:0006221: pyrimidine nucleotide biosynthetic process	3.44E-03
89	GO:0006021: inositol biosynthetic process	3.44E-03
90	GO:0044205: 'de novo' UMP biosynthetic process	3.44E-03
91	GO:0003333: amino acid transmembrane transport	3.68E-03
92	GO:2000022: regulation of jasmonic acid mediated signaling pathway	4.02E-03
93	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	4.39E-03
94	GO:0071215: cellular response to abscisic acid stimulus	4.39E-03
95	GO:0016123: xanthophyll biosynthetic process	4.41E-03
96	GO:0009247: glycolipid biosynthetic process	4.41E-03
97	GO:0016120: carotene biosynthetic process	4.41E-03
98	GO:0010304: PSII associated light-harvesting complex II catabolic process	5.46E-03
99	GO:0016554: cytidine to uridine editing	5.46E-03
100	GO:0060918: auxin transport	5.46E-03
101	GO:1902456: regulation of stomatal opening	5.46E-03
102	GO:0048831: regulation of shoot system development	5.46E-03
103	GO:0010315: auxin efflux	5.46E-03
104	GO:0003006: developmental process involved in reproduction	5.46E-03
105	GO:0009643: photosynthetic acclimation	5.46E-03
106	GO:0006014: D-ribose metabolic process	5.46E-03
107	GO:0010118: stomatal movement	5.60E-03
108	GO:0010087: phloem or xylem histogenesis	5.60E-03
109	GO:0009664: plant-type cell wall organization	5.72E-03
110	GO:0009416: response to light stimulus	5.92E-03
111	GO:0009736: cytokinin-activated signaling pathway	6.26E-03
112	GO:0006355: regulation of transcription, DNA-templated	6.49E-03
113	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	6.60E-03
114	GO:0010310: regulation of hydrogen peroxide metabolic process	6.60E-03
115	GO:0009955: adaxial/abaxial pattern specification	6.60E-03
116	GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	6.60E-03
117	GO:0009942: longitudinal axis specification	6.60E-03
118	GO:0048509: regulation of meristem development	6.60E-03
119	GO:0048825: cotyledon development	6.98E-03
120	GO:0006955: immune response	7.80E-03
121	GO:0006821: chloride transport	7.80E-03
122	GO:0048437: floral organ development	7.80E-03
123	GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process	7.80E-03
124	GO:0010103: stomatal complex morphogenesis	7.80E-03
125	GO:0032502: developmental process	7.99E-03
126	GO:0000105: histidine biosynthetic process	9.09E-03
127	GO:0052543: callose deposition in cell wall	9.09E-03
128	GO:0006402: mRNA catabolic process	9.09E-03
129	GO:0001522: pseudouridine synthesis	9.09E-03
130	GO:0009787: regulation of abscisic acid-activated signaling pathway	9.09E-03
131	GO:0009642: response to light intensity	9.09E-03
132	GO:0019375: galactolipid biosynthetic process	9.09E-03
133	GO:0048766: root hair initiation	9.09E-03
134	GO:0010492: maintenance of shoot apical meristem identity	9.09E-03
135	GO:0001510: RNA methylation	1.04E-02
136	GO:0010497: plasmodesmata-mediated intercellular transport	1.04E-02
137	GO:0009657: plastid organization	1.04E-02
138	GO:0032544: plastid translation	1.04E-02
139	GO:0010027: thylakoid membrane organization	1.09E-02
140	GO:0009733: response to auxin	1.10E-02
141	GO:0000902: cell morphogenesis	1.19E-02
142	GO:0048507: meristem development	1.19E-02
143	GO:0048589: developmental growth	1.19E-02
144	GO:0006349: regulation of gene expression by genetic imprinting	1.34E-02
145	GO:0031425: chloroplast RNA processing	1.34E-02
146	GO:0048481: plant ovule development	1.42E-02
147	GO:0009845: seed germination	1.45E-02
148	GO:0016441: posttranscriptional gene silencing	1.49E-02
149	GO:0000160: phosphorelay signal transduction system	1.49E-02
150	GO:0010048: vernalization response	1.49E-02
151	GO:0045036: protein targeting to chloroplast	1.49E-02
152	GO:0046856: phosphatidylinositol dephosphorylation	1.65E-02
153	GO:0009682: induced systemic resistance	1.65E-02
154	GO:0015770: sucrose transport	1.65E-02
155	GO:1903507: negative regulation of nucleic acid-templated transcription	1.65E-02
156	GO:0009750: response to fructose	1.65E-02
157	GO:0006865: amino acid transport	1.73E-02
158	GO:0006790: sulfur compound metabolic process	1.82E-02
159	GO:0012501: programmed cell death	1.82E-02
160	GO:0010152: pollen maturation	1.82E-02
161	GO:0010582: floral meristem determinacy	1.82E-02
162	GO:0040008: regulation of growth	1.86E-02
163	GO:0010102: lateral root morphogenesis	1.99E-02
164	GO:0009691: cytokinin biosynthetic process	1.99E-02
165	GO:0009887: animal organ morphogenesis	2.17E-02
166	GO:0010540: basipetal auxin transport	2.17E-02
167	GO:0048768: root hair cell tip growth	2.17E-02
168	GO:0048467: gynoecium development	2.17E-02
169	GO:0010020: chloroplast fission	2.17E-02
170	GO:0009926: auxin polar transport	2.33E-02
171	GO:0007166: cell surface receptor signaling pathway	2.34E-02
172	GO:0009901: anther dehiscence	2.36E-02
173	GO:0046854: phosphatidylinositol phosphorylation	2.36E-02
174	GO:0006397: mRNA processing	2.42E-02
175	GO:0008380: RNA splicing	2.47E-02
176	GO:0006636: unsaturated fatty acid biosynthetic process	2.55E-02
177	GO:0080147: root hair cell development	2.74E-02
178	GO:2000377: regulation of reactive oxygen species metabolic process	2.74E-02
179	GO:0031347: regulation of defense response	2.83E-02
180	GO:0010073: meristem maintenance	2.94E-02
181	GO:0019953: sexual reproduction	2.94E-02
182	GO:0010431: seed maturation	3.15E-02
183	GO:0016998: cell wall macromolecule catabolic process	3.15E-02
184	GO:0009826: unidimensional cell growth	3.25E-02
185	GO:0030245: cellulose catabolic process	3.35E-02
186	GO:0010082: regulation of root meristem growth	3.57E-02
187	GO:0048443: stamen development	3.79E-02
188	GO:0010091: trichome branching	3.79E-02
189	GO:0007165: signal transduction	3.94E-02
190	GO:0070417: cellular response to cold	4.01E-02
191	GO:0048366: leaf development	4.17E-02
192	GO:0000226: microtubule cytoskeleton organization	4.24E-02
193	GO:0080022: primary root development	4.24E-02
194	GO:0010501: RNA secondary structure unwinding	4.24E-02
195	GO:0009624: response to nematode	4.46E-02
196	GO:0009741: response to brassinosteroid	4.47E-02
197	GO:0009960: endosperm development	4.47E-02
198	GO:0009958: positive gravitropism	4.47E-02
199	GO:0071472: cellular response to salt stress	4.47E-02
200	GO:0048868: pollen tube development	4.47E-02
201	GO:0006396: RNA processing	4.59E-02
202	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.63E-02
203	GO:0009646: response to absence of light	4.71E-02
204	GO:0048544: recognition of pollen	4.71E-02
205	GO:0007018: microtubule-based movement	4.71E-02
206	GO:0009851: auxin biosynthetic process	4.94E-02
207	GO:0009749: response to glucose	4.94E-02
208	GO:0019252: starch biosynthetic process	4.94E-02
209	GO:0008654: phospholipid biosynthetic process	4.94E-02
210	GO:0005975: carbohydrate metabolic process	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0052834: inositol monophosphate phosphatase activity	0.00E+00
2	GO:0043399: tRNA A64-2'-O-ribosylphosphate transferase activity	0.00E+00
3	GO:0016763: transferase activity, transferring pentosyl groups	0.00E+00
4	GO:0008859: exoribonuclease II activity	0.00E+00
5	GO:0071633: dihydroceramidase activity	0.00E+00
6	GO:0004401: histidinol-phosphatase activity	0.00E+00
7	GO:0004152: dihydroorotate dehydrogenase activity	0.00E+00
8	GO:0016428: tRNA (cytosine-5-)-methyltransferase activity	0.00E+00
9	GO:0003723: RNA binding	3.98E-08
10	GO:0004519: endonuclease activity	5.13E-07
11	GO:0004124: cysteine synthase activity	4.02E-04
12	GO:0016901: oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor	5.00E-04
13	GO:0004654: polyribonucleotide nucleotidyltransferase activity	5.00E-04
14	GO:0010347: L-galactose-1-phosphate phosphatase activity	5.00E-04
15	GO:0004016: adenylate cyclase activity	5.00E-04
16	GO:1905201: gibberellin transmembrane transporter activity	5.00E-04
17	GO:0042834: peptidoglycan binding	5.00E-04
18	GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity	5.00E-04
19	GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity	5.00E-04
20	GO:0016274: protein-arginine N-methyltransferase activity	5.00E-04
21	GO:0052381: tRNA dimethylallyltransferase activity	5.00E-04
22	GO:0008168: methyltransferase activity	5.28E-04
23	GO:0003727: single-stranded RNA binding	5.79E-04
24	GO:0019843: rRNA binding	6.08E-04
25	GO:0008173: RNA methyltransferase activity	7.83E-04
26	GO:0042389: omega-3 fatty acid desaturase activity	1.08E-03
27	GO:0004809: tRNA (guanine-N2-)-methyltransferase activity	1.08E-03
28	GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity	1.08E-03
29	GO:0052832: inositol monophosphate 3-phosphatase activity	1.08E-03
30	GO:0000774: adenyl-nucleotide exchange factor activity	1.08E-03
31	GO:0008934: inositol monophosphate 1-phosphatase activity	1.08E-03
32	GO:0052833: inositol monophosphate 4-phosphatase activity	1.08E-03
33	GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity	1.08E-03
34	GO:0005078: MAP-kinase scaffold activity	1.08E-03
35	GO:0009884: cytokinin receptor activity	1.08E-03
36	GO:0003690: double-stranded DNA binding	1.25E-03
37	GO:0017150: tRNA dihydrouridine synthase activity	1.76E-03
38	GO:0042781: 3'-tRNA processing endoribonuclease activity	1.76E-03
39	GO:0016805: dipeptidase activity	1.76E-03
40	GO:0005034: osmosensor activity	1.76E-03
41	GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity	1.76E-03
42	GO:0009982: pseudouridine synthase activity	1.93E-03
43	GO:0000175: 3'-5'-exoribonuclease activity	1.93E-03
44	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	2.18E-03
45	GO:0001872: (1->3)-beta-D-glucan binding	2.56E-03
46	GO:0009041: uridylate kinase activity	2.56E-03
47	GO:0004222: metalloendopeptidase activity	2.58E-03
48	GO:0010011: auxin binding	3.44E-03
49	GO:0010328: auxin influx transmembrane transporter activity	3.44E-03
50	GO:0005253: anion channel activity	3.44E-03
51	GO:0004930: G-protein coupled receptor activity	3.44E-03
52	GO:0016279: protein-lysine N-methyltransferase activity	3.44E-03
53	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	3.50E-03
54	GO:0030570: pectate lyase activity	4.39E-03
55	GO:0003989: acetyl-CoA carboxylase activity	4.41E-03
56	GO:0004888: transmembrane signaling receptor activity	4.41E-03
57	GO:0005247: voltage-gated chloride channel activity	5.46E-03
58	GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity	5.46E-03
59	GO:0001085: RNA polymerase II transcription factor binding	6.04E-03
60	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	6.60E-03
61	GO:0004747: ribokinase activity	6.60E-03
62	GO:0019900: kinase binding	6.60E-03
63	GO:0019901: protein kinase binding	6.98E-03
64	GO:0008865: fructokinase activity	9.09E-03
65	GO:0008237: metallopeptidase activity	9.65E-03
66	GO:0003724: RNA helicase activity	1.04E-02
67	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	1.04E-02
68	GO:0005215: transporter activity	1.07E-02
69	GO:0009672: auxin:proton symporter activity	1.34E-02
70	GO:0004673: protein histidine kinase activity	1.49E-02
71	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	1.65E-02
72	GO:0008515: sucrose transmembrane transporter activity	1.65E-02
73	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.81E-02
74	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	1.82E-02
75	GO:0000155: phosphorelay sensor kinase activity	1.99E-02
76	GO:0003725: double-stranded RNA binding	1.99E-02
77	GO:0010329: auxin efflux transmembrane transporter activity	1.99E-02
78	GO:0004190: aspartic-type endopeptidase activity	2.36E-02
79	GO:0051119: sugar transmembrane transporter activity	2.36E-02
80	GO:0003700: transcription factor activity, sequence-specific DNA binding	2.39E-02
81	GO:0015293: symporter activity	2.62E-02
82	GO:0003714: transcription corepressor activity	2.74E-02
83	GO:0003677: DNA binding	2.89E-02
84	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.90E-02
85	GO:0051087: chaperone binding	2.94E-02
86	GO:0043424: protein histidine kinase binding	2.94E-02
87	GO:0004540: ribonuclease activity	3.15E-02
88	GO:0004176: ATP-dependent peptidase activity	3.15E-02
89	GO:0003777: microtubule motor activity	3.48E-02
90	GO:0015171: amino acid transmembrane transporter activity	3.48E-02
91	GO:0016788: hydrolase activity, acting on ester bonds	3.49E-02
92	GO:0008810: cellulase activity	3.57E-02
93	GO:0008289: lipid binding	3.69E-02
94	GO:0005102: receptor binding	4.01E-02
95	GO:0018024: histone-lysine N-methyltransferase activity	4.01E-02
96	GO:0016887: ATPase activity	4.31E-02
97	GO:0003779: actin binding	4.33E-02
98	GO:0003713: transcription coactivator activity	4.47E-02
99	GO:0008026: ATP-dependent helicase activity	4.72E-02