GO Enrichment Analysis of Co-expressed Genes with
AT5G22620
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:2000505: regulation of energy homeostasis | 0.00E+00 |
| 2 | GO:0090470: shoot organ boundary specification | 0.00E+00 |
| 3 | GO:0042407: cristae formation | 0.00E+00 |
| 4 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 5 | GO:0035970: peptidyl-threonine dephosphorylation | 0.00E+00 |
| 6 | GO:0090042: tubulin deacetylation | 0.00E+00 |
| 7 | GO:0018023: peptidyl-lysine trimethylation | 0.00E+00 |
| 8 | GO:0017038: protein import | 0.00E+00 |
| 9 | GO:0046460: neutral lipid biosynthetic process | 0.00E+00 |
| 10 | GO:0031116: positive regulation of microtubule polymerization | 0.00E+00 |
| 11 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 12 | GO:0042817: pyridoxal metabolic process | 0.00E+00 |
| 13 | GO:0015995: chlorophyll biosynthetic process | 4.57E-05 |
| 14 | GO:0045038: protein import into chloroplast thylakoid membrane | 6.67E-05 |
| 15 | GO:0030488: tRNA methylation | 1.34E-04 |
| 16 | GO:0048363: mucilage pectin metabolic process | 2.46E-04 |
| 17 | GO:0009443: pyridoxal 5'-phosphate salvage | 2.46E-04 |
| 18 | GO:1902478: negative regulation of defense response to bacterium, incompatible interaction | 2.46E-04 |
| 19 | GO:0015671: oxygen transport | 2.46E-04 |
| 20 | GO:0006659: phosphatidylserine biosynthetic process | 2.46E-04 |
| 21 | GO:0042547: cell wall modification involved in multidimensional cell growth | 2.46E-04 |
| 22 | GO:1902458: positive regulation of stomatal opening | 2.46E-04 |
| 23 | GO:0019432: triglyceride biosynthetic process | 3.36E-04 |
| 24 | GO:0010206: photosystem II repair | 3.36E-04 |
| 25 | GO:0006782: protoporphyrinogen IX biosynthetic process | 4.67E-04 |
| 26 | GO:0009089: lysine biosynthetic process via diaminopimelate | 5.39E-04 |
| 27 | GO:0006739: NADP metabolic process | 5.44E-04 |
| 28 | GO:0034755: iron ion transmembrane transport | 5.44E-04 |
| 29 | GO:0006423: cysteinyl-tRNA aminoacylation | 5.44E-04 |
| 30 | GO:0006435: threonyl-tRNA aminoacylation | 5.44E-04 |
| 31 | GO:1900871: chloroplast mRNA modification | 5.44E-04 |
| 32 | GO:0018026: peptidyl-lysine monomethylation | 5.44E-04 |
| 33 | GO:0090342: regulation of cell aging | 5.44E-04 |
| 34 | GO:0071668: plant-type cell wall assembly | 5.44E-04 |
| 35 | GO:0080183: response to photooxidative stress | 5.44E-04 |
| 36 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 5.44E-04 |
| 37 | GO:0010207: photosystem II assembly | 7.88E-04 |
| 38 | GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition | 8.83E-04 |
| 39 | GO:0034051: negative regulation of plant-type hypersensitive response | 8.83E-04 |
| 40 | GO:0015940: pantothenate biosynthetic process | 8.83E-04 |
| 41 | GO:0001578: microtubule bundle formation | 8.83E-04 |
| 42 | GO:0009102: biotin biosynthetic process | 1.26E-03 |
| 43 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 1.26E-03 |
| 44 | GO:0008615: pyridoxine biosynthetic process | 1.26E-03 |
| 45 | GO:0010371: regulation of gibberellin biosynthetic process | 1.26E-03 |
| 46 | GO:0051322: anaphase | 1.68E-03 |
| 47 | GO:0022622: root system development | 1.68E-03 |
| 48 | GO:0007020: microtubule nucleation | 1.68E-03 |
| 49 | GO:0006021: inositol biosynthetic process | 1.68E-03 |
| 50 | GO:0006734: NADH metabolic process | 1.68E-03 |
| 51 | GO:0010109: regulation of photosynthesis | 1.68E-03 |
| 52 | GO:0046785: microtubule polymerization | 2.15E-03 |
| 53 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 2.65E-03 |
| 54 | GO:0016554: cytidine to uridine editing | 2.65E-03 |
| 55 | GO:0010190: cytochrome b6f complex assembly | 2.65E-03 |
| 56 | GO:0015979: photosynthesis | 3.09E-03 |
| 57 | GO:0009648: photoperiodism | 3.18E-03 |
| 58 | GO:0010310: regulation of hydrogen peroxide metabolic process | 3.18E-03 |
| 59 | GO:0034389: lipid particle organization | 3.18E-03 |
| 60 | GO:0048528: post-embryonic root development | 3.75E-03 |
| 61 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 3.75E-03 |
| 62 | GO:0010196: nonphotochemical quenching | 3.75E-03 |
| 63 | GO:0032880: regulation of protein localization | 3.75E-03 |
| 64 | GO:0010027: thylakoid membrane organization | 3.76E-03 |
| 65 | GO:0009627: systemic acquired resistance | 4.20E-03 |
| 66 | GO:0048564: photosystem I assembly | 4.35E-03 |
| 67 | GO:0006605: protein targeting | 4.35E-03 |
| 68 | GO:2000070: regulation of response to water deprivation | 4.35E-03 |
| 69 | GO:0000105: histidine biosynthetic process | 4.35E-03 |
| 70 | GO:0009932: cell tip growth | 4.98E-03 |
| 71 | GO:0071482: cellular response to light stimulus | 4.98E-03 |
| 72 | GO:0022900: electron transport chain | 4.98E-03 |
| 73 | GO:0006783: heme biosynthetic process | 5.65E-03 |
| 74 | GO:0015780: nucleotide-sugar transport | 5.65E-03 |
| 75 | GO:0043067: regulation of programmed cell death | 6.33E-03 |
| 76 | GO:0006779: porphyrin-containing compound biosynthetic process | 6.33E-03 |
| 77 | GO:1900865: chloroplast RNA modification | 6.33E-03 |
| 78 | GO:0048354: mucilage biosynthetic process involved in seed coat development | 6.33E-03 |
| 79 | GO:0005982: starch metabolic process | 6.33E-03 |
| 80 | GO:0010629: negative regulation of gene expression | 7.06E-03 |
| 81 | GO:0006631: fatty acid metabolic process | 7.39E-03 |
| 82 | GO:0010015: root morphogenesis | 7.80E-03 |
| 83 | GO:0008285: negative regulation of cell proliferation | 7.80E-03 |
| 84 | GO:0019684: photosynthesis, light reaction | 7.80E-03 |
| 85 | GO:0006879: cellular iron ion homeostasis | 7.80E-03 |
| 86 | GO:0045037: protein import into chloroplast stroma | 8.58E-03 |
| 87 | GO:0009658: chloroplast organization | 8.93E-03 |
| 88 | GO:0009725: response to hormone | 9.38E-03 |
| 89 | GO:2000012: regulation of auxin polar transport | 9.38E-03 |
| 90 | GO:0071732: cellular response to nitric oxide | 1.11E-02 |
| 91 | GO:0090351: seedling development | 1.11E-02 |
| 92 | GO:0000162: tryptophan biosynthetic process | 1.20E-02 |
| 93 | GO:0006071: glycerol metabolic process | 1.20E-02 |
| 94 | GO:0006289: nucleotide-excision repair | 1.29E-02 |
| 95 | GO:0016575: histone deacetylation | 1.38E-02 |
| 96 | GO:0043622: cortical microtubule organization | 1.38E-02 |
| 97 | GO:0007017: microtubule-based process | 1.38E-02 |
| 98 | GO:0010073: meristem maintenance | 1.38E-02 |
| 99 | GO:0048511: rhythmic process | 1.47E-02 |
| 100 | GO:0061077: chaperone-mediated protein folding | 1.47E-02 |
| 101 | GO:0009814: defense response, incompatible interaction | 1.57E-02 |
| 102 | GO:0006730: one-carbon metabolic process | 1.57E-02 |
| 103 | GO:0031348: negative regulation of defense response | 1.57E-02 |
| 104 | GO:0071369: cellular response to ethylene stimulus | 1.67E-02 |
| 105 | GO:0010227: floral organ abscission | 1.67E-02 |
| 106 | GO:0009306: protein secretion | 1.77E-02 |
| 107 | GO:0016042: lipid catabolic process | 1.86E-02 |
| 108 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 1.88E-02 |
| 109 | GO:0008284: positive regulation of cell proliferation | 1.88E-02 |
| 110 | GO:0042335: cuticle development | 1.99E-02 |
| 111 | GO:0000271: polysaccharide biosynthetic process | 1.99E-02 |
| 112 | GO:0009741: response to brassinosteroid | 2.09E-02 |
| 113 | GO:0045489: pectin biosynthetic process | 2.09E-02 |
| 114 | GO:0009958: positive gravitropism | 2.09E-02 |
| 115 | GO:0010197: polar nucleus fusion | 2.09E-02 |
| 116 | GO:0009646: response to absence of light | 2.21E-02 |
| 117 | GO:0042752: regulation of circadian rhythm | 2.21E-02 |
| 118 | GO:0009791: post-embryonic development | 2.32E-02 |
| 119 | GO:0008654: phospholipid biosynthetic process | 2.32E-02 |
| 120 | GO:0000302: response to reactive oxygen species | 2.43E-02 |
| 121 | GO:0016032: viral process | 2.55E-02 |
| 122 | GO:0030163: protein catabolic process | 2.67E-02 |
| 123 | GO:0071281: cellular response to iron ion | 2.67E-02 |
| 124 | GO:0010090: trichome morphogenesis | 2.67E-02 |
| 125 | GO:0045490: pectin catabolic process | 2.67E-02 |
| 126 | GO:0010228: vegetative to reproductive phase transition of meristem | 2.80E-02 |
| 127 | GO:0010286: heat acclimation | 2.91E-02 |
| 128 | GO:0071805: potassium ion transmembrane transport | 2.91E-02 |
| 129 | GO:0000910: cytokinesis | 3.04E-02 |
| 130 | GO:0007166: cell surface receptor signaling pathway | 3.06E-02 |
| 131 | GO:0016126: sterol biosynthetic process | 3.16E-02 |
| 132 | GO:0009735: response to cytokinin | 3.52E-02 |
| 133 | GO:0018298: protein-chromophore linkage | 3.82E-02 |
| 134 | GO:0009813: flavonoid biosynthetic process | 3.96E-02 |
| 135 | GO:0048527: lateral root development | 4.24E-02 |
| 136 | GO:0009853: photorespiration | 4.52E-02 |
| 137 | GO:0045087: innate immune response | 4.52E-02 |
| 138 | GO:0016051: carbohydrate biosynthetic process | 4.52E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005048: signal sequence binding | 0.00E+00 |
| 2 | GO:0004076: biotin synthase activity | 0.00E+00 |
| 3 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 4 | GO:0051721: protein phosphatase 2A binding | 0.00E+00 |
| 5 | GO:0042903: tubulin deacetylase activity | 0.00E+00 |
| 6 | GO:0050613: delta14-sterol reductase activity | 0.00E+00 |
| 7 | GO:0043014: alpha-tubulin binding | 0.00E+00 |
| 8 | GO:0003858: 3-hydroxybutyrate dehydrogenase activity | 0.00E+00 |
| 9 | GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity | 0.00E+00 |
| 10 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 2.80E-06 |
| 11 | GO:0030267: glyoxylate reductase (NADP) activity | 1.02E-05 |
| 12 | GO:0070402: NADPH binding | 1.02E-05 |
| 13 | GO:0005528: FK506 binding | 7.15E-05 |
| 14 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 1.34E-04 |
| 15 | GO:0004733: pyridoxamine-phosphate oxidase activity | 2.46E-04 |
| 16 | GO:0003864: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity | 2.46E-04 |
| 17 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 2.46E-04 |
| 18 | GO:0004853: uroporphyrinogen decarboxylase activity | 2.46E-04 |
| 19 | GO:0004856: xylulokinase activity | 2.46E-04 |
| 20 | GO:0052856: NADHX epimerase activity | 2.46E-04 |
| 21 | GO:0009496: plastoquinol--plastocyanin reductase activity | 2.46E-04 |
| 22 | GO:0005080: protein kinase C binding | 2.46E-04 |
| 23 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 2.46E-04 |
| 24 | GO:0052857: NADPHX epimerase activity | 2.46E-04 |
| 25 | GO:0005344: oxygen transporter activity | 2.46E-04 |
| 26 | GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity | 2.46E-04 |
| 27 | GO:0005525: GTP binding | 5.32E-04 |
| 28 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 5.44E-04 |
| 29 | GO:0004817: cysteine-tRNA ligase activity | 5.44E-04 |
| 30 | GO:0004512: inositol-3-phosphate synthase activity | 5.44E-04 |
| 31 | GO:0004829: threonine-tRNA ligase activity | 5.44E-04 |
| 32 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 5.44E-04 |
| 33 | GO:0015462: ATPase-coupled protein transmembrane transporter activity | 8.83E-04 |
| 34 | GO:0003913: DNA photolyase activity | 8.83E-04 |
| 35 | GO:0005504: fatty acid binding | 8.83E-04 |
| 36 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 1.26E-03 |
| 37 | GO:0016851: magnesium chelatase activity | 1.26E-03 |
| 38 | GO:0048487: beta-tubulin binding | 1.26E-03 |
| 39 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.36E-03 |
| 40 | GO:0030570: pectate lyase activity | 1.55E-03 |
| 41 | GO:0004045: aminoacyl-tRNA hydrolase activity | 1.68E-03 |
| 42 | GO:0070628: proteasome binding | 1.68E-03 |
| 43 | GO:0045430: chalcone isomerase activity | 1.68E-03 |
| 44 | GO:0016279: protein-lysine N-methyltransferase activity | 1.68E-03 |
| 45 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 2.15E-03 |
| 46 | GO:0004040: amidase activity | 2.15E-03 |
| 47 | GO:0031593: polyubiquitin binding | 2.65E-03 |
| 48 | GO:2001070: starch binding | 2.65E-03 |
| 49 | GO:0051920: peroxiredoxin activity | 3.18E-03 |
| 50 | GO:0016832: aldehyde-lyase activity | 3.18E-03 |
| 51 | GO:0004017: adenylate kinase activity | 3.18E-03 |
| 52 | GO:0004144: diacylglycerol O-acyltransferase activity | 3.18E-03 |
| 53 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 3.18E-03 |
| 54 | GO:0005338: nucleotide-sugar transmembrane transporter activity | 3.75E-03 |
| 55 | GO:0009881: photoreceptor activity | 3.75E-03 |
| 56 | GO:0016209: antioxidant activity | 4.35E-03 |
| 57 | GO:0008312: 7S RNA binding | 4.35E-03 |
| 58 | GO:0004033: aldo-keto reductase (NADP) activity | 4.35E-03 |
| 59 | GO:0043022: ribosome binding | 4.35E-03 |
| 60 | GO:0008236: serine-type peptidase activity | 4.66E-03 |
| 61 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 4.98E-03 |
| 62 | GO:0008173: RNA methyltransferase activity | 4.98E-03 |
| 63 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 5.67E-03 |
| 64 | GO:0005381: iron ion transmembrane transporter activity | 6.33E-03 |
| 65 | GO:0051537: 2 iron, 2 sulfur cluster binding | 8.67E-03 |
| 66 | GO:0016788: hydrolase activity, acting on ester bonds | 9.14E-03 |
| 67 | GO:0008083: growth factor activity | 1.02E-02 |
| 68 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 1.02E-02 |
| 69 | GO:0004407: histone deacetylase activity | 1.29E-02 |
| 70 | GO:0043130: ubiquitin binding | 1.29E-02 |
| 71 | GO:0051536: iron-sulfur cluster binding | 1.29E-02 |
| 72 | GO:0052689: carboxylic ester hydrolase activity | 1.33E-02 |
| 73 | GO:0015079: potassium ion transmembrane transporter activity | 1.38E-02 |
| 74 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 1.57E-02 |
| 75 | GO:0016491: oxidoreductase activity | 1.57E-02 |
| 76 | GO:0003924: GTPase activity | 1.92E-02 |
| 77 | GO:0008080: N-acetyltransferase activity | 2.09E-02 |
| 78 | GO:0016829: lyase activity | 2.10E-02 |
| 79 | GO:0004252: serine-type endopeptidase activity | 2.15E-02 |
| 80 | GO:0010181: FMN binding | 2.21E-02 |
| 81 | GO:0004872: receptor activity | 2.32E-02 |
| 82 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 2.49E-02 |
| 83 | GO:0005509: calcium ion binding | 2.77E-02 |
| 84 | GO:0003684: damaged DNA binding | 2.79E-02 |
| 85 | GO:0008483: transaminase activity | 2.91E-02 |
| 86 | GO:0005200: structural constituent of cytoskeleton | 2.91E-02 |
| 87 | GO:0003723: RNA binding | 2.96E-02 |
| 88 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 3.40E-02 |
| 89 | GO:0004721: phosphoprotein phosphatase activity | 3.55E-02 |
| 90 | GO:0016787: hydrolase activity | 3.57E-02 |
| 91 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 3.69E-02 |
| 92 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 4.52E-02 |
| 93 | GO:0003746: translation elongation factor activity | 4.52E-02 |
| 94 | GO:0003993: acid phosphatase activity | 4.66E-02 |
| 95 | GO:0050660: flavin adenine dinucleotide binding | 4.76E-02 |
| 96 | GO:0051539: 4 iron, 4 sulfur cluster binding | 4.96E-02 |