Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G21930

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0015843: methylammonium transport0.00E+00
2GO:0031222: arabinan catabolic process0.00E+00
3GO:0006429: leucyl-tRNA aminoacylation0.00E+00
4GO:1905421: regulation of plant organ morphogenesis0.00E+00
5GO:0043488: regulation of mRNA stability0.00E+00
6GO:0061157: mRNA destabilization0.00E+00
7GO:0030155: regulation of cell adhesion0.00E+00
8GO:0010422: regulation of brassinosteroid biosynthetic process0.00E+00
9GO:0031116: positive regulation of microtubule polymerization0.00E+00
10GO:0018131: oxazole or thiazole biosynthetic process0.00E+00
11GO:0010068: protoderm histogenesis0.00E+00
12GO:1903224: regulation of endodermal cell differentiation0.00E+00
13GO:0009157: deoxyribonucleoside monophosphate biosynthetic process0.00E+00
14GO:0006003: fructose 2,6-bisphosphate metabolic process0.00E+00
15GO:0007638: mechanosensory behavior0.00E+00
16GO:0097164: ammonium ion metabolic process0.00E+00
17GO:0045184: establishment of protein localization0.00E+00
18GO:0007172: signal complex assembly0.00E+00
19GO:0006399: tRNA metabolic process0.00E+00
20GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.83E-08
21GO:0009658: chloroplast organization5.42E-08
22GO:0040008: regulation of growth7.41E-07
23GO:0046620: regulation of organ growth8.29E-07
24GO:0009734: auxin-activated signaling pathway3.42E-05
25GO:0000373: Group II intron splicing7.82E-05
26GO:0006468: protein phosphorylation1.36E-04
27GO:0044205: 'de novo' UMP biosynthetic process1.81E-04
28GO:0009926: auxin polar transport1.84E-04
29GO:0032502: developmental process2.03E-04
30GO:0009733: response to auxin3.59E-04
31GO:0009959: negative gravitropism3.86E-04
32GO:0009944: polarity specification of adaxial/abaxial axis4.38E-04
33GO:0005992: trehalose biosynthetic process4.38E-04
34GO:0006418: tRNA aminoacylation for protein translation5.00E-04
35GO:0006747: FAD biosynthetic process5.89E-04
36GO:0034970: histone H3-R2 methylation5.89E-04
37GO:0042659: regulation of cell fate specification5.89E-04
38GO:0070509: calcium ion import5.89E-04
39GO:0034972: histone H3-R26 methylation5.89E-04
40GO:0090558: plant epidermis development5.89E-04
41GO:0010480: microsporocyte differentiation5.89E-04
42GO:0034971: histone H3-R17 methylation5.89E-04
43GO:0035987: endodermal cell differentiation5.89E-04
44GO:0043609: regulation of carbon utilization5.89E-04
45GO:0006436: tryptophanyl-tRNA aminoacylation5.89E-04
46GO:0048528: post-embryonic root development6.56E-04
47GO:0042255: ribosome assembly8.16E-04
48GO:0006002: fructose 6-phosphate metabolic process9.92E-04
49GO:0009657: plastid organization9.92E-04
50GO:0007389: pattern specification process9.92E-04
51GO:0009646: response to absence of light1.16E-03
52GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine1.27E-03
53GO:2000123: positive regulation of stomatal complex development1.27E-03
54GO:0010254: nectary development1.27E-03
55GO:0070981: L-asparagine biosynthetic process1.27E-03
56GO:0060359: response to ammonium ion1.27E-03
57GO:1902326: positive regulation of chlorophyll biosynthetic process1.27E-03
58GO:0010434: bract formation1.27E-03
59GO:0009220: pyrimidine ribonucleotide biosynthetic process1.27E-03
60GO:1904143: positive regulation of carotenoid biosynthetic process1.27E-03
61GO:0009786: regulation of asymmetric cell division1.27E-03
62GO:0048439: flower morphogenesis1.27E-03
63GO:0006529: asparagine biosynthetic process1.27E-03
64GO:0009638: phototropism1.40E-03
65GO:0010252: auxin homeostasis1.77E-03
66GO:0009954: proximal/distal pattern formation2.09E-03
67GO:0045910: negative regulation of DNA recombination2.09E-03
68GO:0048281: inflorescence morphogenesis2.09E-03
69GO:0051127: positive regulation of actin nucleation2.09E-03
70GO:0006954: inflammatory response2.09E-03
71GO:0090708: specification of plant organ axis polarity2.09E-03
72GO:0006000: fructose metabolic process2.09E-03
73GO:0090153: regulation of sphingolipid biosynthetic process2.09E-03
74GO:0001578: microtubule bundle formation2.09E-03
75GO:0043157: response to cation stress2.09E-03
76GO:0010582: floral meristem determinacy2.17E-03
77GO:0030036: actin cytoskeleton organization2.47E-03
78GO:0010411: xyloglucan metabolic process2.74E-03
79GO:0009934: regulation of meristem structural organization2.79E-03
80GO:0010207: photosystem II assembly2.79E-03
81GO:0010020: chloroplast fission2.79E-03
82GO:1902476: chloride transmembrane transport3.03E-03
83GO:0051513: regulation of monopolar cell growth3.03E-03
84GO:0007231: osmosensory signaling pathway3.03E-03
85GO:0051639: actin filament network formation3.03E-03
86GO:0009226: nucleotide-sugar biosynthetic process3.03E-03
87GO:0048645: animal organ formation3.03E-03
88GO:0044211: CTP salvage3.03E-03
89GO:0015696: ammonium transport3.03E-03
90GO:0046739: transport of virus in multicellular host3.03E-03
91GO:0019048: modulation by virus of host morphology or physiology3.03E-03
92GO:2000904: regulation of starch metabolic process3.03E-03
93GO:0051289: protein homotetramerization3.03E-03
94GO:0043572: plastid fission3.03E-03
95GO:0031048: chromatin silencing by small RNA3.03E-03
96GO:0010148: transpiration3.03E-03
97GO:2001141: regulation of RNA biosynthetic process3.03E-03
98GO:0016556: mRNA modification3.03E-03
99GO:0006508: proteolysis3.08E-03
100GO:0070588: calcium ion transmembrane transport3.13E-03
101GO:0009742: brassinosteroid mediated signaling pathway3.25E-03
102GO:0000160: phosphorelay signal transduction system3.33E-03
103GO:0051764: actin crosslink formation4.08E-03
104GO:0030104: water homeostasis4.08E-03
105GO:0033500: carbohydrate homeostasis4.08E-03
106GO:0051322: anaphase4.08E-03
107GO:2000038: regulation of stomatal complex development4.08E-03
108GO:0072488: ammonium transmembrane transport4.08E-03
109GO:0022622: root system development4.08E-03
110GO:0051567: histone H3-K9 methylation4.08E-03
111GO:0007020: microtubule nucleation4.08E-03
112GO:0044206: UMP salvage4.08E-03
113GO:0009165: nucleotide biosynthetic process4.08E-03
114GO:0051302: regulation of cell division4.28E-03
115GO:0016998: cell wall macromolecule catabolic process4.71E-03
116GO:1902183: regulation of shoot apical meristem development5.24E-03
117GO:0016123: xanthophyll biosynthetic process5.24E-03
118GO:0016131: brassinosteroid metabolic process5.24E-03
119GO:0010158: abaxial cell fate specification5.24E-03
120GO:0048578: positive regulation of long-day photoperiodism, flowering5.24E-03
121GO:0046785: microtubule polymerization5.24E-03
122GO:0010375: stomatal complex patterning5.24E-03
123GO:0032543: mitochondrial translation5.24E-03
124GO:0006544: glycine metabolic process5.24E-03
125GO:0071555: cell wall organization5.57E-03
126GO:0042546: cell wall biogenesis6.18E-03
127GO:0006655: phosphatidylglycerol biosynthetic process6.50E-03
128GO:0006139: nucleobase-containing compound metabolic process6.50E-03
129GO:0016458: gene silencing6.50E-03
130GO:0006206: pyrimidine nucleobase metabolic process6.50E-03
131GO:0018258: protein O-linked glycosylation via hydroxyproline6.50E-03
132GO:0006563: L-serine metabolic process6.50E-03
133GO:0009228: thiamine biosynthetic process6.50E-03
134GO:0010405: arabinogalactan protein metabolic process6.50E-03
135GO:0007623: circadian rhythm6.87E-03
136GO:0009451: RNA modification7.12E-03
137GO:0009741: response to brassinosteroid7.77E-03
138GO:0009958: positive gravitropism7.77E-03
139GO:0048868: pollen tube development7.77E-03
140GO:0080086: stamen filament development7.86E-03
141GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity7.86E-03
142GO:2000067: regulation of root morphogenesis7.86E-03
143GO:0009082: branched-chain amino acid biosynthetic process7.86E-03
144GO:0009942: longitudinal axis specification7.86E-03
145GO:0009099: valine biosynthetic process7.86E-03
146GO:0030488: tRNA methylation7.86E-03
147GO:1901259: chloroplast rRNA processing7.86E-03
148GO:0009736: cytokinin-activated signaling pathway8.61E-03
149GO:0010161: red light signaling pathway9.30E-03
150GO:0009610: response to symbiotic fungus9.30E-03
151GO:0006955: immune response9.30E-03
152GO:0006821: chloride transport9.30E-03
153GO:0070370: cellular heat acclimation9.30E-03
154GO:0010444: guard mother cell differentiation9.30E-03
155GO:0010050: vegetative phase change9.30E-03
156GO:0048437: floral organ development9.30E-03
157GO:0010103: stomatal complex morphogenesis9.30E-03
158GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process9.30E-03
159GO:0032880: regulation of protein localization9.30E-03
160GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway9.30E-03
161GO:0052543: callose deposition in cell wall1.08E-02
162GO:0048564: photosystem I assembly1.08E-02
163GO:0001522: pseudouridine synthesis1.08E-02
164GO:0009850: auxin metabolic process1.08E-02
165GO:0009704: de-etiolation1.08E-02
166GO:0030162: regulation of proteolysis1.08E-02
167GO:0045010: actin nucleation1.08E-02
168GO:0006353: DNA-templated transcription, termination1.08E-02
169GO:0070413: trehalose metabolism in response to stress1.08E-02
170GO:0055075: potassium ion homeostasis1.08E-02
171GO:0009231: riboflavin biosynthetic process1.08E-02
172GO:0048364: root development1.12E-02
173GO:0010099: regulation of photomorphogenesis1.25E-02
174GO:0001558: regulation of cell growth1.25E-02
175GO:0071482: cellular response to light stimulus1.25E-02
176GO:0009740: gibberellic acid mediated signaling pathway1.25E-02
177GO:0009827: plant-type cell wall modification1.25E-02
178GO:0009097: isoleucine biosynthetic process1.25E-02
179GO:0010100: negative regulation of photomorphogenesis1.25E-02
180GO:0006526: arginine biosynthetic process1.25E-02
181GO:0010497: plasmodesmata-mediated intercellular transport1.25E-02
182GO:0051607: defense response to virus1.32E-02
183GO:0009051: pentose-phosphate shunt, oxidative branch1.42E-02
184GO:2000024: regulation of leaf development1.42E-02
185GO:0006098: pentose-phosphate shunt1.42E-02
186GO:0006783: heme biosynthetic process1.42E-02
187GO:0000902: cell morphogenesis1.42E-02
188GO:0042761: very long-chain fatty acid biosynthetic process1.60E-02
189GO:2000280: regulation of root development1.60E-02
190GO:0035999: tetrahydrofolate interconversion1.60E-02
191GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.60E-02
192GO:0031425: chloroplast RNA processing1.60E-02
193GO:0006298: mismatch repair1.78E-02
194GO:0006259: DNA metabolic process1.78E-02
195GO:0009299: mRNA transcription1.78E-02
196GO:0006535: cysteine biosynthetic process from serine1.78E-02
197GO:0030422: production of siRNA involved in RNA interference1.78E-02
198GO:0048829: root cap development1.78E-02
199GO:0009641: shade avoidance1.78E-02
200GO:0080167: response to karrikin1.85E-02
201GO:0010015: root morphogenesis1.98E-02
202GO:0006265: DNA topological change1.98E-02
203GO:0009089: lysine biosynthetic process via diaminopimelate1.98E-02
204GO:0006816: calcium ion transport1.98E-02
205GO:0009773: photosynthetic electron transport in photosystem I1.98E-02
206GO:0006352: DNA-templated transcription, initiation1.98E-02
207GO:0048229: gametophyte development1.98E-02
208GO:0006415: translational termination1.98E-02
209GO:0016024: CDP-diacylglycerol biosynthetic process2.18E-02
210GO:0045037: protein import into chloroplast stroma2.18E-02
211GO:0009790: embryo development2.19E-02
212GO:0010075: regulation of meristem growth2.38E-02
213GO:0009725: response to hormone2.38E-02
214GO:0006094: gluconeogenesis2.38E-02
215GO:0009767: photosynthetic electron transport chain2.38E-02
216GO:0010628: positive regulation of gene expression2.38E-02
217GO:2000012: regulation of auxin polar transport2.38E-02
218GO:0006006: glucose metabolic process2.38E-02
219GO:0009785: blue light signaling pathway2.38E-02
220GO:0050826: response to freezing2.38E-02
221GO:0006541: glutamine metabolic process2.60E-02
222GO:0007275: multicellular organism development2.63E-02
223GO:0006839: mitochondrial transport2.65E-02
224GO:0009416: response to light stimulus2.78E-02
225GO:0010030: positive regulation of seed germination2.82E-02
226GO:0006071: glycerol metabolic process3.05E-02
227GO:0006833: water transport3.05E-02
228GO:0010025: wax biosynthetic process3.05E-02
229GO:0007166: cell surface receptor signaling pathway3.20E-02
230GO:0019344: cysteine biosynthetic process3.28E-02
231GO:0009116: nucleoside metabolic process3.28E-02
232GO:0051017: actin filament bundle assembly3.28E-02
233GO:0010187: negative regulation of seed germination3.28E-02
234GO:0006855: drug transmembrane transport3.50E-02
235GO:0043622: cortical microtubule organization3.52E-02
236GO:0006306: DNA methylation3.76E-02
237GO:0009664: plant-type cell wall organization3.76E-02
238GO:0031348: negative regulation of defense response4.01E-02
239GO:0006730: one-carbon metabolic process4.01E-02
240GO:0051603: proteolysis involved in cellular protein catabolic process4.17E-02
241GO:0016310: phosphorylation4.24E-02
242GO:0010227: floral organ abscission4.27E-02
243GO:0010082: regulation of root meristem growth4.27E-02
244GO:0009686: gibberellin biosynthetic process4.27E-02
245GO:0001944: vasculature development4.27E-02
246GO:0030154: cell differentiation4.29E-02
247GO:0006417: regulation of translation4.46E-02
248GO:0006096: glycolytic process4.76E-02
249GO:0008284: positive regulation of cell proliferation4.80E-02
250GO:0009789: positive regulation of abscisic acid-activated signaling pathway4.80E-02
251GO:0048316: seed development4.91E-02
252GO:0048367: shoot system development4.91E-02
RankGO TermAdjusted P value
1GO:0070009: serine-type aminopeptidase activity0.00E+00
2GO:0019136: deoxynucleoside kinase activity0.00E+00
3GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity0.00E+00
4GO:0004588: orotate phosphoribosyltransferase activity0.00E+00
5GO:0004590: orotidine-5'-phosphate decarboxylase activity0.00E+00
6GO:0003873: 6-phosphofructo-2-kinase activity0.00E+00
7GO:0004823: leucine-tRNA ligase activity0.00E+00
8GO:0004056: argininosuccinate lyase activity0.00E+00
9GO:0004674: protein serine/threonine kinase activity8.74E-06
10GO:0001872: (1->3)-beta-D-glucan binding1.06E-04
11GO:0004805: trehalose-phosphatase activity1.30E-04
12GO:0019199: transmembrane receptor protein kinase activity1.81E-04
13GO:0050139: nicotinate-N-glucosyltransferase activity5.89E-04
14GO:0004088: carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity5.89E-04
15GO:0042834: peptidoglycan binding5.89E-04
16GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity5.89E-04
17GO:0008158: hedgehog receptor activity5.89E-04
18GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity5.89E-04
19GO:0004071: aspartate-ammonia ligase activity5.89E-04
20GO:0004830: tryptophan-tRNA ligase activity5.89E-04
21GO:0010285: L,L-diaminopimelate aminotransferase activity5.89E-04
22GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity5.89E-04
23GO:0010313: phytochrome binding5.89E-04
24GO:0004160: dihydroxy-acid dehydratase activity5.89E-04
25GO:0003727: single-stranded RNA binding7.91E-04
26GO:0004812: aminoacyl-tRNA ligase activity8.76E-04
27GO:0005524: ATP binding8.80E-04
28GO:0016301: kinase activity1.24E-03
29GO:0043425: bHLH transcription factor binding1.27E-03
30GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity1.27E-03
31GO:0003919: FMN adenylyltransferase activity1.27E-03
32GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity1.27E-03
33GO:0050017: L-3-cyanoalanine synthase activity1.27E-03
34GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity1.27E-03
35GO:0035241: protein-arginine omega-N monomethyltransferase activity1.27E-03
36GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity1.27E-03
37GO:0016762: xyloglucan:xyloglucosyl transferase activity1.39E-03
38GO:0009672: auxin:proton symporter activity1.40E-03
39GO:0000156: phosphorelay response regulator activity1.64E-03
40GO:0005089: Rho guanyl-nucleotide exchange factor activity1.89E-03
41GO:0008469: histone-arginine N-methyltransferase activity2.09E-03
42GO:0032549: ribonucleoside binding2.09E-03
43GO:0070330: aromatase activity2.09E-03
44GO:0017150: tRNA dihydrouridine synthase activity2.09E-03
45GO:0002161: aminoacyl-tRNA editing activity2.09E-03
46GO:0005262: calcium channel activity2.47E-03
47GO:0010329: auxin efflux transmembrane transporter activity2.47E-03
48GO:0016798: hydrolase activity, acting on glycosyl bonds2.74E-03
49GO:0035197: siRNA binding3.03E-03
50GO:0004519: endonuclease activity3.69E-03
51GO:0001053: plastid sigma factor activity4.08E-03
52GO:0004845: uracil phosphoribosyltransferase activity4.08E-03
53GO:0004345: glucose-6-phosphate dehydrogenase activity4.08E-03
54GO:0016836: hydro-lyase activity4.08E-03
55GO:0016987: sigma factor activity4.08E-03
56GO:0005253: anion channel activity4.08E-03
57GO:0042277: peptide binding4.08E-03
58GO:0046556: alpha-L-arabinofuranosidase activity4.08E-03
59GO:0019843: rRNA binding4.20E-03
60GO:0004176: ATP-dependent peptidase activity4.71E-03
61GO:0033612: receptor serine/threonine kinase binding4.71E-03
62GO:0004372: glycine hydroxymethyltransferase activity5.24E-03
63GO:0018685: alkane 1-monooxygenase activity5.24E-03
64GO:0016773: phosphotransferase activity, alcohol group as acceptor5.24E-03
65GO:0004672: protein kinase activity5.48E-03
66GO:0004675: transmembrane receptor protein serine/threonine kinase activity6.17E-03
67GO:0043621: protein self-association6.49E-03
68GO:2001070: starch binding6.50E-03
69GO:0030983: mismatched DNA binding6.50E-03
70GO:0004605: phosphatidate cytidylyltransferase activity6.50E-03
71GO:1990714: hydroxyproline O-galactosyltransferase activity6.50E-03
72GO:0004332: fructose-bisphosphate aldolase activity6.50E-03
73GO:0008519: ammonium transmembrane transporter activity6.50E-03
74GO:0005247: voltage-gated chloride channel activity6.50E-03
75GO:0004124: cysteine synthase activity7.86E-03
76GO:0008195: phosphatidate phosphatase activity7.86E-03
77GO:0004849: uridine kinase activity7.86E-03
78GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity7.86E-03
79GO:0003730: mRNA 3'-UTR binding7.86E-03
80GO:0003872: 6-phosphofructokinase activity9.30E-03
81GO:0043022: ribosome binding1.08E-02
82GO:0051015: actin filament binding1.10E-02
83GO:0004650: polygalacturonase activity1.20E-02
84GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity1.25E-02
85GO:0008353: RNA polymerase II carboxy-terminal domain kinase activity1.25E-02
86GO:0008889: glycerophosphodiester phosphodiesterase activity1.42E-02
87GO:0003747: translation release factor activity1.42E-02
88GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds1.65E-02
89GO:0030247: polysaccharide binding1.65E-02
90GO:0004713: protein tyrosine kinase activity1.78E-02
91GO:0015238: drug transmembrane transporter activity1.92E-02
92GO:0001054: RNA polymerase I activity1.98E-02
93GO:0016829: lyase activity1.99E-02
94GO:0004222: metalloendopeptidase activity2.02E-02
95GO:0004252: serine-type endopeptidase activity2.06E-02
96GO:0030170: pyridoxal phosphate binding2.06E-02
97GO:0016614: oxidoreductase activity, acting on CH-OH group of donors2.12E-02
98GO:0004521: endoribonuclease activity2.18E-02
99GO:0009982: pseudouridine synthase activity2.38E-02
100GO:0004565: beta-galactosidase activity2.38E-02
101GO:0004089: carbonate dehydratase activity2.38E-02
102GO:0031072: heat shock protein binding2.38E-02
103GO:0003723: RNA binding2.48E-02
104GO:0004871: signal transducer activity2.59E-02
105GO:0042803: protein homodimerization activity2.59E-02
106GO:0008083: growth factor activity2.60E-02
107GO:0046983: protein dimerization activity2.67E-02
108GO:0004190: aspartic-type endopeptidase activity2.82E-02
109GO:0004185: serine-type carboxypeptidase activity3.00E-02
110GO:0005528: FK506 binding3.28E-02
111GO:0005345: purine nucleobase transmembrane transporter activity3.52E-02
112GO:0008408: 3'-5' exonuclease activity3.76E-02
113GO:0003899: DNA-directed 5'-3' RNA polymerase activity4.03E-02
114GO:0003690: double-stranded DNA binding4.17E-02
115GO:0005215: transporter activity4.41E-02
116GO:0008514: organic anion transmembrane transporter activity4.53E-02
117GO:0030246: carbohydrate binding4.53E-02
118GO:0016788: hydrolase activity, acting on ester bonds4.75E-02
119GO:0047134: protein-disulfide reductase activity4.80E-02
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Gene type



Gene DE type