co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G19190

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0071000: response to magnetism	0.00E+00
2	GO:0010068: protoderm histogenesis	0.00E+00
3	GO:0070979: protein K11-linked ubiquitination	0.00E+00
4	GO:0061157: mRNA destabilization	0.00E+00
5	GO:0090706: specification of plant organ position	0.00E+00
6	GO:0009157: deoxyribonucleoside monophosphate biosynthetic process	0.00E+00
7	GO:0009583: detection of light stimulus	0.00E+00
8	GO:0007037: vacuolar phosphate transport	0.00E+00
9	GO:0046283: anthocyanin-containing compound metabolic process	7.43E-05
10	GO:0072387: flavin adenine dinucleotide metabolic process	2.63E-04
11	GO:0006264: mitochondrial DNA replication	2.63E-04
12	GO:0033259: plastid DNA replication	2.63E-04
13	GO:0051247: positive regulation of protein metabolic process	2.63E-04
14	GO:2000905: negative regulation of starch metabolic process	2.63E-04
15	GO:0010450: inflorescence meristem growth	2.63E-04
16	GO:0051171: regulation of nitrogen compound metabolic process	2.63E-04
17	GO:1902265: abscisic acid homeostasis	2.63E-04
18	GO:0009740: gibberellic acid mediated signaling pathway	4.31E-04
19	GO:0009638: phototropism	4.38E-04
20	GO:0010029: regulation of seed germination	5.26E-04
21	GO:1905011: transmembrane phosphate ion transport from cytosol to vacuole	5.78E-04
22	GO:0010115: regulation of abscisic acid biosynthetic process	5.78E-04
23	GO:1900871: chloroplast mRNA modification	5.78E-04
24	GO:0010617: circadian regulation of calcium ion oscillation	5.78E-04
25	GO:0099402: plant organ development	5.78E-04
26	GO:1900033: negative regulation of trichome patterning	5.78E-04
27	GO:0031648: protein destabilization	5.78E-04
28	GO:0010343: singlet oxygen-mediated programmed cell death	5.78E-04
29	GO:1901529: positive regulation of anion channel activity	5.78E-04
30	GO:0048573: photoperiodism, flowering	6.03E-04
31	GO:0070475: rRNA base methylation	9.39E-04
32	GO:0048586: regulation of long-day photoperiodism, flowering	9.39E-04
33	GO:1901672: positive regulation of systemic acquired resistance	9.39E-04
34	GO:0031145: anaphase-promoting complex-dependent catabolic process	9.39E-04
35	GO:0051604: protein maturation	9.39E-04
36	GO:0016050: vesicle organization	9.39E-04
37	GO:0045165: cell fate commitment	9.39E-04
38	GO:0031022: nuclear migration along microfilament	9.39E-04
39	GO:0051127: positive regulation of actin nucleation	9.39E-04
40	GO:1902448: positive regulation of shade avoidance	9.39E-04
41	GO:0009833: plant-type primary cell wall biogenesis	1.07E-03
42	GO:0007623: circadian rhythm	1.08E-03
43	GO:0010187: negative regulation of seed germination	1.18E-03
44	GO:0009647: skotomorphogenesis	1.34E-03
45	GO:0006164: purine nucleotide biosynthetic process	1.34E-03
46	GO:0009963: positive regulation of flavonoid biosynthetic process	1.34E-03
47	GO:0048645: animal organ formation	1.34E-03
48	GO:0010255: glucose mediated signaling pathway	1.34E-03
49	GO:1901332: negative regulation of lateral root development	1.34E-03
50	GO:0009067: aspartate family amino acid biosynthetic process	1.34E-03
51	GO:0030071: regulation of mitotic metaphase/anaphase transition	1.34E-03
52	GO:0051639: actin filament network formation	1.34E-03
53	GO:0034059: response to anoxia	1.34E-03
54	GO:0009649: entrainment of circadian clock	1.79E-03
55	GO:1902347: response to strigolactone	1.79E-03
56	GO:0009902: chloroplast relocation	1.79E-03
57	GO:0009165: nucleotide biosynthetic process	1.79E-03
58	GO:0048629: trichome patterning	1.79E-03
59	GO:0051764: actin crosslink formation	1.79E-03
60	GO:2000306: positive regulation of photomorphogenesis	1.79E-03
61	GO:0022622: root system development	1.79E-03
62	GO:0009585: red, far-red light phototransduction	1.84E-03
63	GO:0010087: phloem or xylem histogenesis	2.16E-03
64	GO:0006544: glycine metabolic process	2.29E-03
65	GO:0010117: photoprotection	2.29E-03
66	GO:0045038: protein import into chloroplast thylakoid membrane	2.29E-03
67	GO:1902183: regulation of shoot apical meristem development	2.29E-03
68	GO:0010158: abaxial cell fate specification	2.29E-03
69	GO:0032876: negative regulation of DNA endoreduplication	2.29E-03
70	GO:0009958: positive gravitropism	2.32E-03
71	GO:0010182: sugar mediated signaling pathway	2.32E-03
72	GO:0048367: shoot system development	2.37E-03
73	GO:1901371: regulation of leaf morphogenesis	2.82E-03
74	GO:0060918: auxin transport	2.82E-03
75	GO:0006139: nucleobase-containing compound metabolic process	2.82E-03
76	GO:1902456: regulation of stomatal opening	2.82E-03
77	GO:0000741: karyogamy	2.82E-03
78	GO:0009117: nucleotide metabolic process	2.82E-03
79	GO:0006561: proline biosynthetic process	2.82E-03
80	GO:0006563: L-serine metabolic process	2.82E-03
81	GO:0009959: negative gravitropism	2.82E-03
82	GO:0045962: positive regulation of development, heterochronic	2.82E-03
83	GO:0010583: response to cyclopentenone	3.06E-03
84	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.07E-03
85	GO:0046777: protein autophosphorylation	3.23E-03
86	GO:0042372: phylloquinone biosynthetic process	3.40E-03
87	GO:0009903: chloroplast avoidance movement	3.40E-03
88	GO:0010189: vitamin E biosynthetic process	3.40E-03
89	GO:0009088: threonine biosynthetic process	3.40E-03
90	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	3.40E-03
91	GO:0009648: photoperiodism	3.40E-03
92	GO:0010310: regulation of hydrogen peroxide metabolic process	3.40E-03
93	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	3.40E-03
94	GO:0051510: regulation of unidimensional cell growth	4.00E-03
95	GO:0032880: regulation of protein localization	4.00E-03
96	GO:0010161: red light signaling pathway	4.00E-03
97	GO:0009610: response to symbiotic fungus	4.00E-03
98	GO:0009690: cytokinin metabolic process	4.65E-03
99	GO:0010078: maintenance of root meristem identity	4.65E-03
100	GO:0032875: regulation of DNA endoreduplication	4.65E-03
101	GO:0009787: regulation of abscisic acid-activated signaling pathway	4.65E-03
102	GO:0010100: negative regulation of photomorphogenesis	5.32E-03
103	GO:0006997: nucleus organization	5.32E-03
104	GO:0043562: cellular response to nitrogen levels	5.32E-03
105	GO:0010093: specification of floral organ identity	5.32E-03
106	GO:0010099: regulation of photomorphogenesis	5.32E-03
107	GO:0030244: cellulose biosynthetic process	5.39E-03
108	GO:0009832: plant-type cell wall biogenesis	5.67E-03
109	GO:2000024: regulation of leaf development	6.03E-03
110	GO:0006783: heme biosynthetic process	6.03E-03
111	GO:0006189: 'de novo' IMP biosynthetic process	6.03E-03
112	GO:0009051: pentose-phosphate shunt, oxidative branch	6.03E-03
113	GO:0051865: protein autoubiquitination	6.03E-03
114	GO:0048527: lateral root development	6.23E-03
115	GO:0010380: regulation of chlorophyll biosynthetic process	6.77E-03
116	GO:0071577: zinc II ion transmembrane transport	6.77E-03
117	GO:1900426: positive regulation of defense response to bacterium	6.77E-03
118	GO:0010018: far-red light signaling pathway	6.77E-03
119	GO:1900865: chloroplast RNA modification	6.77E-03
120	GO:0009637: response to blue light	6.83E-03
121	GO:0006468: protein phosphorylation	6.91E-03
122	GO:0010468: regulation of gene expression	7.24E-03
123	GO:0016310: phosphorylation	7.33E-03
124	GO:0009299: mRNA transcription	7.54E-03
125	GO:0006535: cysteine biosynthetic process from serine	7.54E-03
126	GO:0009688: abscisic acid biosynthetic process	7.54E-03
127	GO:0009641: shade avoidance	7.54E-03
128	GO:0010192: mucilage biosynthetic process	7.54E-03
129	GO:0009089: lysine biosynthetic process via diaminopimelate	8.35E-03
130	GO:0009750: response to fructose	8.35E-03
131	GO:0009684: indoleacetic acid biosynthetic process	8.35E-03
132	GO:0009773: photosynthetic electron transport in photosystem I	8.35E-03
133	GO:0009640: photomorphogenesis	8.82E-03
134	GO:0009644: response to high light intensity	9.55E-03
135	GO:0030048: actin filament-based movement	1.00E-02
136	GO:0009785: blue light signaling pathway	1.00E-02
137	GO:0010628: positive regulation of gene expression	1.00E-02
138	GO:0006006: glucose metabolic process	1.00E-02
139	GO:0030036: actin cytoskeleton organization	1.00E-02
140	GO:0010075: regulation of meristem growth	1.00E-02
141	GO:0009725: response to hormone	1.00E-02
142	GO:0010588: cotyledon vascular tissue pattern formation	1.00E-02
143	GO:2000012: regulation of auxin polar transport	1.00E-02
144	GO:0009933: meristem structural organization	1.09E-02
145	GO:0048467: gynoecium development	1.09E-02
146	GO:0090351: seedling development	1.18E-02
147	GO:0010030: positive regulation of seed germination	1.18E-02
148	GO:0009723: response to ethylene	1.21E-02
149	GO:0042753: positive regulation of circadian rhythm	1.28E-02
150	GO:0030154: cell differentiation	1.34E-02
151	GO:0009944: polarity specification of adaxial/abaxial axis	1.38E-02
152	GO:0007010: cytoskeleton organization	1.38E-02
153	GO:0051017: actin filament bundle assembly	1.38E-02
154	GO:2000377: regulation of reactive oxygen species metabolic process	1.38E-02
155	GO:0005992: trehalose biosynthetic process	1.38E-02
156	GO:0019344: cysteine biosynthetic process	1.38E-02
157	GO:0000027: ribosomal large subunit assembly	1.38E-02
158	GO:0035428: hexose transmembrane transport	1.68E-02
159	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.68E-02
160	GO:0009686: gibberellin biosynthetic process	1.79E-02
161	GO:0010214: seed coat development	1.90E-02
162	GO:0008284: positive regulation of cell proliferation	2.01E-02
163	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	2.01E-02
164	GO:0042335: cuticle development	2.13E-02
165	GO:0000271: polysaccharide biosynthetic process	2.13E-02
166	GO:0080022: primary root development	2.13E-02
167	GO:0010118: stomatal movement	2.13E-02
168	GO:0042631: cellular response to water deprivation	2.13E-02
169	GO:0010154: fruit development	2.24E-02
170	GO:0010197: polar nucleus fusion	2.24E-02
171	GO:0046323: glucose import	2.24E-02
172	GO:0045489: pectin biosynthetic process	2.24E-02
173	GO:0042752: regulation of circadian rhythm	2.36E-02
174	GO:0009646: response to absence of light	2.36E-02
175	GO:0048825: cotyledon development	2.48E-02
176	GO:0008654: phospholipid biosynthetic process	2.48E-02
177	GO:0009851: auxin biosynthetic process	2.48E-02
178	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	2.61E-02
179	GO:0032502: developmental process	2.73E-02
180	GO:0007264: small GTPase mediated signal transduction	2.73E-02
181	GO:0040008: regulation of growth	2.81E-02
182	GO:0071281: cellular response to iron ion	2.86E-02
183	GO:0009639: response to red or far red light	2.99E-02
184	GO:0006464: cellular protein modification process	2.99E-02
185	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	3.52E-02
186	GO:0015995: chlorophyll biosynthetic process	3.80E-02
187	GO:0007165: signal transduction	3.99E-02
188	GO:0018298: protein-chromophore linkage	4.09E-02
189	GO:0009733: response to auxin	4.24E-02
190	GO:0000160: phosphorelay signal transduction system	4.24E-02
191	GO:0009738: abscisic acid-activated signaling pathway	4.25E-02
192	GO:0010218: response to far red light	4.38E-02
193	GO:0009416: response to light stimulus	4.42E-02
194	GO:0010119: regulation of stomatal movement	4.53E-02
195	GO:0009910: negative regulation of flower development	4.53E-02
196	GO:0006865: amino acid transport	4.69E-02
197	GO:0035556: intracellular signal transduction	4.72E-02
198	GO:0016051: carbohydrate biosynthetic process	4.84E-02
199	GO:0009853: photorespiration	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0004639: phosphoribosylaminoimidazolesuccinocarboxamide synthase activity	0.00E+00
2	GO:0052907: 23S rRNA (adenine(1618)-N(6))-methyltransferase activity	0.00E+00
3	GO:0010276: phytol kinase activity	0.00E+00
4	GO:0008756: o-succinylbenzoate-CoA ligase activity	0.00E+00
5	GO:1990534: thermospermine oxidase activity	0.00E+00
6	GO:0019136: deoxynucleoside kinase activity	0.00E+00
7	GO:0010301: xanthoxin dehydrogenase activity	0.00E+00
8	GO:0010313: phytochrome binding	2.63E-04
9	GO:0050139: nicotinate-N-glucosyltransferase activity	2.63E-04
10	GO:0016301: kinase activity	5.33E-04
11	GO:0080097: L-tryptophan:pyruvate aminotransferase activity	5.78E-04
12	GO:0050017: L-3-cyanoalanine synthase activity	5.78E-04
13	GO:0017118: lipoyltransferase activity	5.78E-04
14	GO:0043425: bHLH transcription factor binding	5.78E-04
15	GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity	5.78E-04
16	GO:0004672: protein kinase activity	7.56E-04
17	GO:0017172: cysteine dioxygenase activity	1.34E-03
18	GO:0009882: blue light photoreceptor activity	1.34E-03
19	GO:0004072: aspartate kinase activity	1.34E-03
20	GO:0035529: NADH pyrophosphatase activity	1.34E-03
21	GO:0042802: identical protein binding	1.56E-03
22	GO:0016760: cellulose synthase (UDP-forming) activity	1.70E-03
23	GO:0004345: glucose-6-phosphate dehydrogenase activity	1.79E-03
24	GO:0008409: 5'-3' exonuclease activity	1.79E-03
25	GO:0080032: methyl jasmonate esterase activity	1.79E-03
26	GO:0016773: phosphotransferase activity, alcohol group as acceptor	2.29E-03
27	GO:0016846: carbon-sulfur lyase activity	2.29E-03
28	GO:0004372: glycine hydroxymethyltransferase activity	2.29E-03
29	GO:0016208: AMP binding	2.82E-03
30	GO:0016462: pyrophosphatase activity	2.82E-03
31	GO:0004605: phosphatidate cytidylyltransferase activity	2.82E-03
32	GO:0004709: MAP kinase kinase kinase activity	2.82E-03
33	GO:0004124: cysteine synthase activity	3.40E-03
34	GO:0016759: cellulose synthase activity	3.47E-03
35	GO:0004674: protein serine/threonine kinase activity	5.24E-03
36	GO:0071949: FAD binding	6.03E-03
37	GO:0004805: trehalose-phosphatase activity	7.54E-03
38	GO:0008794: arsenate reductase (glutaredoxin) activity	8.35E-03
39	GO:0051537: 2 iron, 2 sulfur cluster binding	9.55E-03
40	GO:0043621: protein self-association	9.55E-03
41	GO:0004022: alcohol dehydrogenase (NAD) activity	1.00E-02
42	GO:0005524: ATP binding	1.02E-02
43	GO:0008131: primary amine oxidase activity	1.09E-02
44	GO:0008083: growth factor activity	1.09E-02
45	GO:0005515: protein binding	1.14E-02
46	GO:0044212: transcription regulatory region DNA binding	1.16E-02
47	GO:0003887: DNA-directed DNA polymerase activity	1.28E-02
48	GO:0005385: zinc ion transmembrane transporter activity	1.38E-02
49	GO:0005528: FK506 binding	1.38E-02
50	GO:0008324: cation transmembrane transporter activity	1.48E-02
51	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.58E-02
52	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.68E-02
53	GO:0004871: signal transducer activity	1.77E-02
54	GO:0030570: pectate lyase activity	1.79E-02
55	GO:0003727: single-stranded RNA binding	1.90E-02
56	GO:0008514: organic anion transmembrane transporter activity	1.90E-02
57	GO:0003700: transcription factor activity, sequence-specific DNA binding	2.05E-02
58	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.19E-02
59	GO:0001085: RNA polymerase II transcription factor binding	2.24E-02
60	GO:0005355: glucose transmembrane transporter activity	2.36E-02
61	GO:0010181: FMN binding	2.36E-02
62	GO:0019901: protein kinase binding	2.48E-02
63	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.74E-02
64	GO:0000156: phosphorelay response regulator activity	2.86E-02
65	GO:0051015: actin filament binding	2.86E-02
66	GO:0008017: microtubule binding	3.08E-02
67	GO:0016722: oxidoreductase activity, oxidizing metal ions	3.12E-02
68	GO:0016597: amino acid binding	3.25E-02
69	GO:0016757: transferase activity, transferring glycosyl groups	3.69E-02
70	GO:0015238: drug transmembrane transporter activity	4.24E-02
71	GO:0005096: GTPase activator activity	4.24E-02
72	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	4.38E-02
73	GO:0050897: cobalt ion binding	4.53E-02
74	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	4.53E-02
75	GO:0016788: hydrolase activity, acting on ester bonds	4.62E-02