Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G18660

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0071474: cellular hyperosmotic response0.00E+00
2GO:0034337: RNA folding0.00E+00
3GO:0002184: cytoplasmic translational termination0.00E+00
4GO:0006223: uracil salvage0.00E+00
5GO:0016553: base conversion or substitution editing0.00E+00
6GO:0090279: regulation of calcium ion import0.00E+00
7GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation0.00E+00
8GO:0090470: shoot organ boundary specification0.00E+00
9GO:0035970: peptidyl-threonine dephosphorylation0.00E+00
10GO:0070272: proton-transporting ATP synthase complex biogenesis0.00E+00
11GO:0015979: photosynthesis2.05E-08
12GO:0015995: chlorophyll biosynthetic process7.02E-07
13GO:0009735: response to cytokinin6.81E-06
14GO:0030388: fructose 1,6-bisphosphate metabolic process7.60E-06
15GO:0048564: photosystem I assembly1.75E-05
16GO:0032544: plastid translation2.49E-05
17GO:0071482: cellular response to light stimulus2.49E-05
18GO:0006000: fructose metabolic process2.63E-05
19GO:0055114: oxidation-reduction process3.25E-05
20GO:0009658: chloroplast organization5.30E-05
21GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly5.73E-05
22GO:0010021: amylopectin biosynthetic process1.01E-04
23GO:0006094: gluconeogenesis1.11E-04
24GO:0010207: photosystem II assembly1.33E-04
25GO:0043097: pyrimidine nucleoside salvage1.56E-04
26GO:0006412: translation1.95E-04
27GO:0006206: pyrimidine nucleobase metabolic process2.23E-04
28GO:1901259: chloroplast rRNA processing3.00E-04
29GO:0019748: secondary metabolic process3.18E-04
30GO:0042254: ribosome biogenesis3.24E-04
31GO:0043953: protein transport by the Tat complex4.13E-04
32GO:0000481: maturation of 5S rRNA4.13E-04
33GO:1904964: positive regulation of phytol biosynthetic process4.13E-04
34GO:0065002: intracellular protein transmembrane transport4.13E-04
35GO:0043686: co-translational protein modification4.13E-04
36GO:0048363: mucilage pectin metabolic process4.13E-04
37GO:1902478: negative regulation of defense response to bacterium, incompatible interaction4.13E-04
38GO:0043489: RNA stabilization4.13E-04
39GO:0015671: oxygen transport4.13E-04
40GO:1904966: positive regulation of vitamin E biosynthetic process4.13E-04
41GO:0006002: fructose 6-phosphate metabolic process5.92E-04
42GO:0019252: starch biosynthetic process6.51E-04
43GO:0006783: heme biosynthetic process7.09E-04
44GO:0071668: plant-type cell wall assembly8.93E-04
45GO:0006435: threonyl-tRNA aminoacylation8.93E-04
46GO:0080183: response to photooxidative stress8.93E-04
47GO:0006729: tetrahydrobiopterin biosynthetic process8.93E-04
48GO:0051262: protein tetramerization8.93E-04
49GO:0010275: NAD(P)H dehydrogenase complex assembly8.93E-04
50GO:1902326: positive regulation of chlorophyll biosynthetic process8.93E-04
51GO:0000256: allantoin catabolic process8.93E-04
52GO:0018119: peptidyl-cysteine S-nitrosylation1.12E-03
53GO:0009773: photosynthetic electron transport in photosystem I1.12E-03
54GO:0010027: thylakoid membrane organization1.13E-03
55GO:0044375: regulation of peroxisome size1.45E-03
56GO:0005977: glycogen metabolic process1.45E-03
57GO:0005986: sucrose biosynthetic process1.45E-03
58GO:0006518: peptide metabolic process1.45E-03
59GO:0010136: ureide catabolic process1.45E-03
60GO:0034051: negative regulation of plant-type hypersensitive response1.45E-03
61GO:0009817: defense response to fungus, incompatible interaction1.57E-03
62GO:0019253: reductive pentose-phosphate cycle1.64E-03
63GO:0006228: UTP biosynthetic process2.10E-03
64GO:0006986: response to unfolded protein2.10E-03
65GO:2001141: regulation of RNA biosynthetic process2.10E-03
66GO:0010371: regulation of gibberellin biosynthetic process2.10E-03
67GO:0006020: inositol metabolic process2.10E-03
68GO:0051085: chaperone mediated protein folding requiring cofactor2.10E-03
69GO:0009152: purine ribonucleotide biosynthetic process2.10E-03
70GO:0046653: tetrahydrofolate metabolic process2.10E-03
71GO:0009052: pentose-phosphate shunt, non-oxidative branch2.10E-03
72GO:0033014: tetrapyrrole biosynthetic process2.10E-03
73GO:0006241: CTP biosynthetic process2.10E-03
74GO:0010731: protein glutathionylation2.10E-03
75GO:0006424: glutamyl-tRNA aminoacylation2.10E-03
76GO:1901332: negative regulation of lateral root development2.10E-03
77GO:0006145: purine nucleobase catabolic process2.10E-03
78GO:0006165: nucleoside diphosphate phosphorylation2.10E-03
79GO:0006633: fatty acid biosynthetic process2.60E-03
80GO:0044206: UMP salvage2.82E-03
81GO:0006109: regulation of carbohydrate metabolic process2.82E-03
82GO:0006183: GTP biosynthetic process2.82E-03
83GO:0045727: positive regulation of translation2.82E-03
84GO:0006536: glutamate metabolic process2.82E-03
85GO:0010600: regulation of auxin biosynthetic process2.82E-03
86GO:0006021: inositol biosynthetic process2.82E-03
87GO:0016120: carotene biosynthetic process3.61E-03
88GO:0031365: N-terminal protein amino acid modification3.61E-03
89GO:0000304: response to singlet oxygen3.61E-03
90GO:0080110: sporopollenin biosynthetic process3.61E-03
91GO:0032543: mitochondrial translation3.61E-03
92GO:0006564: L-serine biosynthetic process3.61E-03
93GO:0005975: carbohydrate metabolic process4.12E-03
94GO:0006364: rRNA processing4.32E-03
95GO:0046855: inositol phosphate dephosphorylation4.47E-03
96GO:0042549: photosystem II stabilization4.47E-03
97GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway4.47E-03
98GO:0006655: phosphatidylglycerol biosynthetic process4.47E-03
99GO:0009854: oxidative photosynthetic carbon pathway5.38E-03
100GO:0010244: response to low fluence blue light stimulus by blue low-fluence system5.38E-03
101GO:0010161: red light signaling pathway6.36E-03
102GO:0009772: photosynthetic electron transport in photosystem II6.36E-03
103GO:0009645: response to low light intensity stimulus6.36E-03
104GO:0032508: DNA duplex unwinding7.40E-03
105GO:0016559: peroxisome fission7.40E-03
106GO:0010928: regulation of auxin mediated signaling pathway7.40E-03
107GO:0005978: glycogen biosynthetic process7.40E-03
108GO:0009704: de-etiolation7.40E-03
109GO:0017004: cytochrome complex assembly8.49E-03
110GO:0006526: arginine biosynthetic process8.49E-03
111GO:0006754: ATP biosynthetic process9.65E-03
112GO:0010206: photosystem II repair9.65E-03
113GO:0019432: triglyceride biosynthetic process9.65E-03
114GO:0006810: transport1.04E-02
115GO:0018298: protein-chromophore linkage1.06E-02
116GO:0031425: chloroplast RNA processing1.09E-02
117GO:0005982: starch metabolic process1.09E-02
118GO:0006779: porphyrin-containing compound biosynthetic process1.09E-02
119GO:0048354: mucilage biosynthetic process involved in seed coat development1.09E-02
120GO:0006535: cysteine biosynthetic process from serine1.21E-02
121GO:0006782: protoporphyrinogen IX biosynthetic process1.21E-02
122GO:0007568: aging1.22E-02
123GO:0008285: negative regulation of cell proliferation1.34E-02
124GO:0009750: response to fructose1.34E-02
125GO:0009853: photorespiration1.34E-02
126GO:0009089: lysine biosynthetic process via diaminopimelate1.34E-02
127GO:0045087: innate immune response1.34E-02
128GO:0043085: positive regulation of catalytic activity1.34E-02
129GO:0016051: carbohydrate biosynthetic process1.34E-02
130GO:0006352: DNA-templated transcription, initiation1.34E-02
131GO:0034599: cellular response to oxidative stress1.41E-02
132GO:0016024: CDP-diacylglycerol biosynthetic process1.48E-02
133GO:0006790: sulfur compound metabolic process1.48E-02
134GO:0005983: starch catabolic process1.48E-02
135GO:0006631: fatty acid metabolic process1.60E-02
136GO:0006807: nitrogen compound metabolic process1.62E-02
137GO:0018107: peptidyl-threonine phosphorylation1.62E-02
138GO:0009767: photosynthetic electron transport chain1.62E-02
139GO:0009266: response to temperature stimulus1.76E-02
140GO:0046854: phosphatidylinositol phosphorylation1.91E-02
141GO:0007031: peroxisome organization1.91E-02
142GO:0019762: glucosinolate catabolic process2.06E-02
143GO:0006636: unsaturated fatty acid biosynthetic process2.06E-02
144GO:0006508: proteolysis2.10E-02
145GO:0006289: nucleotide-excision repair2.22E-02
146GO:0019344: cysteine biosynthetic process2.22E-02
147GO:0009116: nucleoside metabolic process2.22E-02
148GO:0000027: ribosomal large subunit assembly2.22E-02
149GO:0009585: red, far-red light phototransduction2.34E-02
150GO:0009409: response to cold2.35E-02
151GO:0007017: microtubule-based process2.38E-02
152GO:0010073: meristem maintenance2.38E-02
153GO:0009768: photosynthesis, light harvesting in photosystem I2.38E-02
154GO:0048511: rhythmic process2.55E-02
155GO:0010431: seed maturation2.55E-02
156GO:0061077: chaperone-mediated protein folding2.55E-02
157GO:0031408: oxylipin biosynthetic process2.55E-02
158GO:0016114: terpenoid biosynthetic process2.55E-02
159GO:0035428: hexose transmembrane transport2.72E-02
160GO:0080092: regulation of pollen tube growth2.72E-02
161GO:0016226: iron-sulfur cluster assembly2.72E-02
162GO:0010017: red or far-red light signaling pathway2.72E-02
163GO:0006096: glycolytic process2.77E-02
164GO:0009411: response to UV2.89E-02
165GO:0009625: response to insect2.89E-02
166GO:0010227: floral organ abscission2.89E-02
167GO:0006012: galactose metabolic process2.89E-02
168GO:0010584: pollen exine formation3.07E-02
169GO:0016117: carotenoid biosynthetic process3.25E-02
170GO:0042335: cuticle development3.44E-02
171GO:0042631: cellular response to water deprivation3.44E-02
172GO:0000271: polysaccharide biosynthetic process3.44E-02
173GO:0006662: glycerol ether metabolic process3.63E-02
174GO:0046323: glucose import3.63E-02
175GO:0006520: cellular amino acid metabolic process3.63E-02
176GO:0045489: pectin biosynthetic process3.63E-02
177GO:0042742: defense response to bacterium3.63E-02
178GO:0015986: ATP synthesis coupled proton transport3.82E-02
179GO:0009791: post-embryonic development4.01E-02
180GO:0000302: response to reactive oxygen species4.21E-02
181GO:0009058: biosynthetic process4.39E-02
182GO:0032502: developmental process4.41E-02
183GO:1901657: glycosyl compound metabolic process4.62E-02
184GO:0042744: hydrogen peroxide catabolic process4.74E-02
185GO:0009567: double fertilization forming a zygote and endosperm4.83E-02
186GO:0006629: lipid metabolic process4.99E-02
RankGO TermAdjusted P value
1GO:0003858: 3-hydroxybutyrate dehydrogenase activity0.00E+00
2GO:0004567: beta-mannosidase activity0.00E+00
3GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity0.00E+00
4GO:0008465: glycerate dehydrogenase activity0.00E+00
5GO:0046408: chlorophyll synthetase activity0.00E+00
6GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity0.00E+00
7GO:0008942: nitrite reductase [NAD(P)H] activity0.00E+00
8GO:0047668: amygdalin beta-glucosidase activity0.00E+00
9GO:0080083: beta-gentiobiose beta-glucosidase activity0.00E+00
10GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity0.00E+00
11GO:0009974: zeinoxanthin epsilon hydroxylase activity0.00E+00
12GO:0019144: ADP-sugar diphosphatase activity0.00E+00
13GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity0.00E+00
14GO:0080082: esculin beta-glucosidase activity0.00E+00
15GO:0016631: enoyl-[acyl-carrier-protein] reductase activity0.00E+00
16GO:0050613: delta14-sterol reductase activity0.00E+00
17GO:0090711: FMN hydrolase activity0.00E+00
18GO:0050515: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity0.00E+00
19GO:0050278: sedoheptulose-bisphosphatase activity0.00E+00
20GO:0090471: 9,15,9'-tri-cis-zeta-carotene isomerase activity0.00E+00
21GO:0008974: phosphoribulokinase activity0.00E+00
22GO:0071522: ureidoglycine aminohydrolase activity0.00E+00
23GO:0019843: rRNA binding1.11E-09
24GO:0008266: poly(U) RNA binding1.10E-07
25GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity7.60E-06
26GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity7.60E-06
27GO:0003735: structural constituent of ribosome3.14E-05
28GO:0016851: magnesium chelatase activity5.73E-05
29GO:0003755: peptidyl-prolyl cis-trans isomerase activity8.29E-05
30GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor1.01E-04
31GO:0005528: FK506 binding2.15E-04
32GO:0004849: uridine kinase activity3.00E-04
33GO:0004325: ferrochelatase activity4.13E-04
34GO:0004853: uroporphyrinogen decarboxylase activity4.13E-04
35GO:0042586: peptide deformylase activity4.13E-04
36GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity4.13E-04
37GO:0016784: 3-mercaptopyruvate sulfurtransferase activity4.13E-04
38GO:0005344: oxygen transporter activity4.13E-04
39GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity4.13E-04
40GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity4.13E-04
41GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity4.13E-04
42GO:0005227: calcium activated cation channel activity4.13E-04
43GO:0080079: cellobiose glucosidase activity4.13E-04
44GO:0016776: phosphotransferase activity, phosphate group as acceptor4.13E-04
45GO:0004856: xylulokinase activity4.13E-04
46GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity4.13E-04
47GO:0080042: ADP-glucose pyrophosphohydrolase activity4.13E-04
48GO:0005080: protein kinase C binding4.13E-04
49GO:0051287: NAD binding6.50E-04
50GO:0048038: quinone binding7.10E-04
51GO:0050017: L-3-cyanoalanine synthase activity8.93E-04
52GO:0042389: omega-3 fatty acid desaturase activity8.93E-04
53GO:0080041: ADP-ribose pyrophosphohydrolase activity8.93E-04
54GO:0009977: proton motive force dependent protein transmembrane transporter activity8.93E-04
55GO:0004617: phosphoglycerate dehydrogenase activity8.93E-04
56GO:0052832: inositol monophosphate 3-phosphatase activity8.93E-04
57GO:0003844: 1,4-alpha-glucan branching enzyme activity8.93E-04
58GO:0016630: protochlorophyllide reductase activity8.93E-04
59GO:0004829: threonine-tRNA ligase activity8.93E-04
60GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity8.93E-04
61GO:0019156: isoamylase activity8.93E-04
62GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase8.93E-04
63GO:0008934: inositol monophosphate 1-phosphatase activity8.93E-04
64GO:0052833: inositol monophosphate 4-phosphatase activity8.93E-04
65GO:0016491: oxidoreductase activity1.02E-03
66GO:0004751: ribose-5-phosphate isomerase activity1.45E-03
67GO:0030267: glyoxylate reductase (NADP) activity1.45E-03
68GO:0016742: hydroxymethyl-, formyl- and related transferase activity1.45E-03
69GO:0070402: NADPH binding1.45E-03
70GO:0031072: heat shock protein binding1.45E-03
71GO:0008864: formyltetrahydrofolate deformylase activity1.45E-03
72GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor1.45E-03
73GO:0005504: fatty acid binding1.45E-03
74GO:0043169: cation binding1.45E-03
75GO:0003955: NAD(P)H dehydrogenase (quinone) activity1.45E-03
76GO:0004148: dihydrolipoyl dehydrogenase activity1.45E-03
77GO:0004550: nucleoside diphosphate kinase activity2.10E-03
78GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor2.10E-03
79GO:0043023: ribosomal large subunit binding2.10E-03
80GO:0008097: 5S rRNA binding2.10E-03
81GO:0004351: glutamate decarboxylase activity2.10E-03
82GO:0004792: thiosulfate sulfurtransferase activity2.10E-03
83GO:0003746: translation elongation factor activity2.13E-03
84GO:0043495: protein anchor2.82E-03
85GO:0001053: plastid sigma factor activity2.82E-03
86GO:0004845: uracil phosphoribosyltransferase activity2.82E-03
87GO:0070628: proteasome binding2.82E-03
88GO:0045430: chalcone isomerase activity2.82E-03
89GO:0016987: sigma factor activity2.82E-03
90GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity2.82E-03
91GO:0004185: serine-type carboxypeptidase activity2.95E-03
92GO:0008374: O-acyltransferase activity3.61E-03
93GO:0003959: NADPH dehydrogenase activity3.61E-03
94GO:0016773: phosphotransferase activity, alcohol group as acceptor3.61E-03
95GO:0003729: mRNA binding3.93E-03
96GO:0004366: glycerol-3-phosphate O-acyltransferase activity4.47E-03
97GO:0042578: phosphoric ester hydrolase activity4.47E-03
98GO:0004332: fructose-bisphosphate aldolase activity4.47E-03
99GO:0031593: polyubiquitin binding4.47E-03
100GO:0004556: alpha-amylase activity4.47E-03
101GO:0004130: cytochrome-c peroxidase activity4.47E-03
102GO:0050662: coenzyme binding4.85E-03
103GO:0005261: cation channel activity5.38E-03
104GO:0004124: cysteine synthase activity5.38E-03
105GO:0051920: peroxiredoxin activity5.38E-03
106GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity5.38E-03
107GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity5.38E-03
108GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity5.38E-03
109GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups5.57E-03
110GO:0004601: peroxidase activity5.86E-03
111GO:0019899: enzyme binding6.36E-03
112GO:0051082: unfolded protein binding6.77E-03
113GO:0004033: aldo-keto reductase (NADP) activity7.40E-03
114GO:0016209: antioxidant activity7.40E-03
115GO:0004034: aldose 1-epimerase activity7.40E-03
116GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water8.49E-03
117GO:0008135: translation factor activity, RNA binding8.49E-03
118GO:0016168: chlorophyll binding8.56E-03
119GO:0016787: hydrolase activity9.23E-03
120GO:0004721: phosphoprotein phosphatase activity9.54E-03
121GO:0071949: FAD binding9.65E-03
122GO:0003723: RNA binding9.77E-03
123GO:0004252: serine-type endopeptidase activity1.03E-02
124GO:0030955: potassium ion binding1.09E-02
125GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity1.09E-02
126GO:0004743: pyruvate kinase activity1.09E-02
127GO:0004222: metalloendopeptidase activity1.17E-02
128GO:0030234: enzyme regulator activity1.21E-02
129GO:0008047: enzyme activator activity1.21E-02
130GO:0005089: Rho guanyl-nucleotide exchange factor activity1.34E-02
131GO:0004565: beta-galactosidase activity1.62E-02
132GO:0051537: 2 iron, 2 sulfur cluster binding1.88E-02
133GO:0046872: metal ion binding1.91E-02
134GO:0031409: pigment binding2.06E-02
135GO:0051536: iron-sulfur cluster binding2.22E-02
136GO:0004857: enzyme inhibitor activity2.22E-02
137GO:0043130: ubiquitin binding2.22E-02
138GO:0051087: chaperone binding2.38E-02
139GO:0005525: GTP binding2.57E-02
140GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.72E-02
141GO:0022891: substrate-specific transmembrane transporter activity2.89E-02
142GO:0003756: protein disulfide isomerase activity3.07E-02
143GO:0005509: calcium ion binding3.17E-02
144GO:0047134: protein-disulfide reductase activity3.25E-02
145GO:0008080: N-acetyltransferase activity3.63E-02
146GO:0046933: proton-transporting ATP synthase activity, rotational mechanism3.63E-02
147GO:0004791: thioredoxin-disulfide reductase activity3.82E-02
148GO:0016853: isomerase activity3.82E-02
149GO:0005355: glucose transmembrane transporter activity3.82E-02
150GO:0003824: catalytic activity4.22E-02
151GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor4.62E-02
152GO:0030170: pyridoxal phosphate binding4.62E-02
153GO:0003684: damaged DNA binding4.83E-02
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Gene type



Gene DE type