Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G18590

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1901671: positive regulation of superoxide dismutase activity0.00E+00
2GO:0030155: regulation of cell adhesion0.00E+00
3GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate0.00E+00
4GO:0017038: protein import0.00E+00
5GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation0.00E+00
6GO:0090470: shoot organ boundary specification0.00E+00
7GO:0031116: positive regulation of microtubule polymerization0.00E+00
8GO:0006428: isoleucyl-tRNA aminoacylation0.00E+00
9GO:0042407: cristae formation0.00E+00
10GO:0042817: pyridoxal metabolic process0.00E+00
11GO:0046396: D-galacturonate metabolic process0.00E+00
12GO:1905177: tracheary element differentiation0.00E+00
13GO:0018023: peptidyl-lysine trimethylation0.00E+00
14GO:0051290: protein heterotetramerization0.00E+00
15GO:0070125: mitochondrial translational elongation0.00E+00
16GO:0006429: leucyl-tRNA aminoacylation0.00E+00
17GO:0019685: photosynthesis, dark reaction0.00E+00
18GO:1905421: regulation of plant organ morphogenesis0.00E+00
19GO:0051085: chaperone mediated protein folding requiring cofactor4.01E-05
20GO:0009627: systemic acquired resistance9.72E-05
21GO:0032543: mitochondrial translation1.12E-04
22GO:0045038: protein import into chloroplast thylakoid membrane1.12E-04
23GO:0009409: response to cold1.39E-04
24GO:0009658: chloroplast organization1.58E-04
25GO:0042026: protein refolding2.20E-04
26GO:0009793: embryo development ending in seed dormancy2.33E-04
27GO:0000476: maturation of 4.5S rRNA3.37E-04
28GO:0000967: rRNA 5'-end processing3.37E-04
29GO:0042547: cell wall modification involved in multidimensional cell growth3.37E-04
30GO:0042371: vitamin K biosynthetic process3.37E-04
31GO:1902458: positive regulation of stomatal opening3.37E-04
32GO:0005991: trehalose metabolic process3.37E-04
33GO:0006747: FAD biosynthetic process3.37E-04
34GO:0006419: alanyl-tRNA aminoacylation3.37E-04
35GO:0000105: histidine biosynthetic process3.60E-04
36GO:0032544: plastid translation4.41E-04
37GO:1900865: chloroplast RNA modification6.25E-04
38GO:0005982: starch metabolic process6.25E-04
39GO:0006782: protoporphyrinogen IX biosynthetic process7.29E-04
40GO:0010198: synergid death7.34E-04
41GO:0006739: NADP metabolic process7.34E-04
42GO:1900871: chloroplast mRNA modification7.34E-04
43GO:0006432: phenylalanyl-tRNA aminoacylation7.34E-04
44GO:0018026: peptidyl-lysine monomethylation7.34E-04
45GO:0090342: regulation of cell aging7.34E-04
46GO:0034755: iron ion transmembrane transport7.34E-04
47GO:0006423: cysteinyl-tRNA aminoacylation7.34E-04
48GO:0006435: threonyl-tRNA aminoacylation7.34E-04
49GO:0009220: pyrimidine ribonucleotide biosynthetic process7.34E-04
50GO:1903426: regulation of reactive oxygen species biosynthetic process7.34E-04
51GO:0015804: neutral amino acid transport7.34E-04
52GO:0034470: ncRNA processing7.34E-04
53GO:0010027: thylakoid membrane organization7.75E-04
54GO:0006415: translational termination8.40E-04
55GO:0015995: chlorophyll biosynthetic process9.50E-04
56GO:0006094: gluconeogenesis1.08E-03
57GO:0033591: response to L-ascorbic acid1.19E-03
58GO:0048281: inflorescence morphogenesis1.19E-03
59GO:0010623: programmed cell death involved in cell development1.19E-03
60GO:0051604: protein maturation1.19E-03
61GO:0015940: pantothenate biosynthetic process1.19E-03
62GO:0001578: microtubule bundle formation1.19E-03
63GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition1.19E-03
64GO:0009790: embryo development1.46E-03
65GO:0006508: proteolysis1.54E-03
66GO:0009226: nucleotide-sugar biosynthetic process1.71E-03
67GO:0008615: pyridoxine biosynthetic process1.71E-03
68GO:0006424: glutamyl-tRNA aminoacylation1.71E-03
69GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity1.71E-03
70GO:0006164: purine nucleotide biosynthetic process1.71E-03
71GO:0010148: transpiration1.71E-03
72GO:0043572: plastid fission1.71E-03
73GO:0006986: response to unfolded protein1.71E-03
74GO:2001141: regulation of RNA biosynthetic process1.71E-03
75GO:0010371: regulation of gibberellin biosynthetic process1.71E-03
76GO:0009102: biotin biosynthetic process1.71E-03
77GO:0006418: tRNA aminoacylation for protein translation1.86E-03
78GO:0061077: chaperone-mediated protein folding2.04E-03
79GO:0007005: mitochondrion organization2.23E-03
80GO:0051322: anaphase2.30E-03
81GO:0009765: photosynthesis, light harvesting2.30E-03
82GO:0006734: NADH metabolic process2.30E-03
83GO:0044205: 'de novo' UMP biosynthetic process2.30E-03
84GO:0010508: positive regulation of autophagy2.30E-03
85GO:0007020: microtubule nucleation2.30E-03
86GO:0010109: regulation of photosynthesis2.30E-03
87GO:0006012: galactose metabolic process2.43E-03
88GO:0006465: signal peptide processing2.93E-03
89GO:0046785: microtubule polymerization2.93E-03
90GO:0016120: carotene biosynthetic process2.93E-03
91GO:0010236: plastoquinone biosynthetic process2.93E-03
92GO:0016123: xanthophyll biosynthetic process2.93E-03
93GO:0016554: cytidine to uridine editing3.63E-03
94GO:0032973: amino acid export3.63E-03
95GO:0042549: photosystem II stabilization3.63E-03
96GO:0009955: adaxial/abaxial pattern specification4.37E-03
97GO:0042372: phylloquinone biosynthetic process4.37E-03
98GO:0046835: carbohydrate phosphorylation4.37E-03
99GO:0006458: 'de novo' protein folding4.37E-03
100GO:0030488: tRNA methylation4.37E-03
101GO:1901259: chloroplast rRNA processing4.37E-03
102GO:0009648: photoperiodism4.37E-03
103GO:0010310: regulation of hydrogen peroxide metabolic process4.37E-03
104GO:0009772: photosynthetic electron transport in photosystem II5.15E-03
105GO:0043090: amino acid import5.15E-03
106GO:0070370: cellular heat acclimation5.15E-03
107GO:0006614: SRP-dependent cotranslational protein targeting to membrane5.15E-03
108GO:0010444: guard mother cell differentiation5.15E-03
109GO:0006400: tRNA modification5.15E-03
110GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process5.15E-03
111GO:0015693: magnesium ion transport5.15E-03
112GO:0010103: stomatal complex morphogenesis5.15E-03
113GO:0009395: phospholipid catabolic process5.15E-03
114GO:0048528: post-embryonic root development5.15E-03
115GO:0006605: protein targeting5.99E-03
116GO:2000070: regulation of response to water deprivation5.99E-03
117GO:0070413: trehalose metabolism in response to stress5.99E-03
118GO:0009231: riboflavin biosynthetic process5.99E-03
119GO:0052543: callose deposition in cell wall5.99E-03
120GO:0046686: response to cadmium ion6.13E-03
121GO:0071482: cellular response to light stimulus6.87E-03
122GO:0022900: electron transport chain6.87E-03
123GO:0001558: regulation of cell growth6.87E-03
124GO:0009657: plastid organization6.87E-03
125GO:0006098: pentose-phosphate shunt7.79E-03
126GO:0010206: photosystem II repair7.79E-03
127GO:0080144: amino acid homeostasis7.79E-03
128GO:0006783: heme biosynthetic process7.79E-03
129GO:0043067: regulation of programmed cell death8.75E-03
130GO:0006779: porphyrin-containing compound biosynthetic process8.75E-03
131GO:0016042: lipid catabolic process8.85E-03
132GO:0010629: negative regulation of gene expression9.76E-03
133GO:0006949: syncytium formation9.76E-03
134GO:0045087: innate immune response9.89E-03
135GO:0019684: photosynthesis, light reaction1.08E-02
136GO:0009089: lysine biosynthetic process via diaminopimelate1.08E-02
137GO:0008285: negative regulation of cell proliferation1.08E-02
138GO:0006879: cellular iron ion homeostasis1.08E-02
139GO:0006352: DNA-templated transcription, initiation1.08E-02
140GO:0018119: peptidyl-cysteine S-nitrosylation1.08E-02
141GO:0009684: indoleacetic acid biosynthetic process1.08E-02
142GO:0010015: root morphogenesis1.08E-02
143GO:0045037: protein import into chloroplast stroma1.19E-02
144GO:2000012: regulation of auxin polar transport1.30E-02
145GO:0006108: malate metabolic process1.30E-02
146GO:0050826: response to freezing1.30E-02
147GO:0009725: response to hormone1.30E-02
148GO:0010207: photosystem II assembly1.42E-02
149GO:0010020: chloroplast fission1.42E-02
150GO:0019853: L-ascorbic acid biosynthetic process1.54E-02
151GO:0071732: cellular response to nitric oxide1.54E-02
152GO:0090351: seedling development1.54E-02
153GO:0009664: plant-type cell wall organization1.61E-02
154GO:0000162: tryptophan biosynthetic process1.66E-02
155GO:0006833: water transport1.66E-02
156GO:0009116: nucleoside metabolic process1.79E-02
157GO:0009944: polarity specification of adaxial/abaxial axis1.79E-02
158GO:0007010: cytoskeleton organization1.79E-02
159GO:0005992: trehalose biosynthetic process1.79E-02
160GO:0043622: cortical microtubule organization1.92E-02
161GO:0007017: microtubule-based process1.92E-02
162GO:0010073: meristem maintenance1.92E-02
163GO:0051302: regulation of cell division1.92E-02
164GO:0006096: glycolytic process2.04E-02
165GO:0003333: amino acid transmembrane transport2.05E-02
166GO:0048511: rhythmic process2.05E-02
167GO:0009814: defense response, incompatible interaction2.19E-02
168GO:0035428: hexose transmembrane transport2.19E-02
169GO:0006730: one-carbon metabolic process2.19E-02
170GO:0031348: negative regulation of defense response2.19E-02
171GO:0009416: response to light stimulus2.19E-02
172GO:0009831: plant-type cell wall modification involved in multidimensional cell growth2.33E-02
173GO:0071369: cellular response to ethylene stimulus2.33E-02
174GO:0001944: vasculature development2.33E-02
175GO:0010227: floral organ abscission2.33E-02
176GO:0009306: protein secretion2.47E-02
177GO:0010089: xylem development2.47E-02
178GO:0015979: photosynthesis2.50E-02
179GO:0006396: RNA processing2.53E-02
180GO:0016117: carotenoid biosynthetic process2.62E-02
181GO:0009789: positive regulation of abscisic acid-activated signaling pathway2.62E-02
182GO:0034220: ion transmembrane transport2.77E-02
183GO:0000413: protein peptidyl-prolyl isomerization2.77E-02
184GO:0010197: polar nucleus fusion2.92E-02
185GO:0010182: sugar mediated signaling pathway2.92E-02
186GO:0046323: glucose import2.92E-02
187GO:0042752: regulation of circadian rhythm3.07E-02
188GO:0009646: response to absence of light3.07E-02
189GO:0055085: transmembrane transport3.11E-02
190GO:0006457: protein folding3.20E-02
191GO:0000302: response to reactive oxygen species3.39E-02
192GO:0016032: viral process3.55E-02
193GO:0030163: protein catabolic process3.72E-02
194GO:0071281: cellular response to iron ion3.72E-02
195GO:0010090: trichome morphogenesis3.72E-02
196GO:1901657: glycosyl compound metabolic process3.72E-02
197GO:0009828: plant-type cell wall loosening3.88E-02
198GO:0006413: translational initiation3.96E-02
199GO:0000910: cytokinesis4.23E-02
200GO:0045490: pectin catabolic process4.24E-02
201GO:0005975: carbohydrate metabolic process4.35E-02
202GO:0016126: sterol biosynthetic process4.40E-02
203GO:0001666: response to hypoxia4.40E-02
204GO:0009911: positive regulation of flower development4.40E-02
205GO:0009788: negative regulation of abscisic acid-activated signaling pathway4.58E-02
206GO:0007166: cell surface receptor signaling pathway4.84E-02
RankGO TermAdjusted P value
1GO:0010349: L-galactose dehydrogenase activity0.00E+00
2GO:0043864: indoleacetamide hydrolase activity0.00E+00
3GO:0047912: galacturonokinase activity0.00E+00
4GO:0004588: orotate phosphoribosyltransferase activity0.00E+00
5GO:0004590: orotidine-5'-phosphate decarboxylase activity0.00E+00
6GO:0004635: phosphoribosyl-AMP cyclohydrolase activity0.00E+00
7GO:0050613: delta14-sterol reductase activity0.00E+00
8GO:0004643: phosphoribosylaminoimidazolecarboxamide formyltransferase activity0.00E+00
9GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity0.00E+00
10GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity0.00E+00
11GO:0045435: lycopene epsilon cyclase activity0.00E+00
12GO:0004823: leucine-tRNA ligase activity0.00E+00
13GO:0003858: 3-hydroxybutyrate dehydrogenase activity0.00E+00
14GO:0004822: isoleucine-tRNA ligase activity0.00E+00
15GO:0004636: phosphoribosyl-ATP diphosphatase activity0.00E+00
16GO:0015267: channel activity0.00E+00
17GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity0.00E+00
18GO:0005048: signal sequence binding0.00E+00
19GO:0004076: biotin synthase activity0.00E+00
20GO:0003937: IMP cyclohydrolase activity0.00E+00
21GO:0002161: aminoacyl-tRNA editing activity1.82E-05
22GO:0016149: translation release factor activity, codon specific4.01E-05
23GO:0016851: magnesium chelatase activity4.01E-05
24GO:0000049: tRNA binding5.78E-05
25GO:0008237: metallopeptidase activity6.36E-05
26GO:0004176: ATP-dependent peptidase activity1.86E-04
27GO:0004733: pyridoxamine-phosphate oxidase activity3.37E-04
28GO:0003864: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity3.37E-04
29GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity3.37E-04
30GO:0004856: xylulokinase activity3.37E-04
31GO:0004813: alanine-tRNA ligase activity3.37E-04
32GO:0004853: uroporphyrinogen decarboxylase activity3.37E-04
33GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity3.37E-04
34GO:0052857: NADPHX epimerase activity3.37E-04
35GO:0052856: NADHX epimerase activity3.37E-04
36GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity3.37E-04
37GO:0004347: glucose-6-phosphate isomerase activity3.37E-04
38GO:0005525: GTP binding4.39E-04
39GO:0003747: translation release factor activity5.29E-04
40GO:0004817: cysteine-tRNA ligase activity7.34E-04
41GO:0003919: FMN adenylyltransferase activity7.34E-04
42GO:0004829: threonine-tRNA ligase activity7.34E-04
43GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase7.34E-04
44GO:0004826: phenylalanine-tRNA ligase activity7.34E-04
45GO:0015172: acidic amino acid transmembrane transporter activity7.34E-04
46GO:0004326: tetrahydrofolylpolyglutamate synthase activity7.34E-04
47GO:0009977: proton motive force dependent protein transmembrane transporter activity7.34E-04
48GO:0044183: protein binding involved in protein folding8.40E-04
49GO:0016788: hydrolase activity, acting on ester bonds8.43E-04
50GO:0003913: DNA photolyase activity1.19E-03
51GO:0030267: glyoxylate reductase (NADP) activity1.19E-03
52GO:0015462: ATPase-coupled protein transmembrane transporter activity1.19E-03
53GO:0004222: metalloendopeptidase activity1.22E-03
54GO:0005528: FK506 binding1.68E-03
55GO:0003825: alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity1.71E-03
56GO:0019201: nucleotide kinase activity1.71E-03
57GO:0015175: neutral amino acid transmembrane transporter activity1.71E-03
58GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor1.71E-03
59GO:0001872: (1->3)-beta-D-glucan binding1.71E-03
60GO:0051087: chaperone binding1.86E-03
61GO:0004045: aminoacyl-tRNA hydrolase activity2.30E-03
62GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds2.30E-03
63GO:0016987: sigma factor activity2.30E-03
64GO:0019199: transmembrane receptor protein kinase activity2.30E-03
65GO:0042277: peptide binding2.30E-03
66GO:0004335: galactokinase activity2.30E-03
67GO:0004659: prenyltransferase activity2.30E-03
68GO:0016279: protein-lysine N-methyltransferase activity2.30E-03
69GO:0001053: plastid sigma factor activity2.30E-03
70GO:0003924: GTPase activity2.35E-03
71GO:0030570: pectate lyase activity2.43E-03
72GO:0003755: peptidyl-prolyl cis-trans isomerase activity2.44E-03
73GO:0004812: aminoacyl-tRNA ligase activity2.87E-03
74GO:0016773: phosphotransferase activity, alcohol group as acceptor2.93E-03
75GO:0004040: amidase activity2.93E-03
76GO:0004332: fructose-bisphosphate aldolase activity3.63E-03
77GO:0042578: phosphoric ester hydrolase activity3.63E-03
78GO:2001070: starch binding3.63E-03
79GO:0004017: adenylate kinase activity4.37E-03
80GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity4.37E-03
81GO:0016832: aldehyde-lyase activity4.37E-03
82GO:0030060: L-malate dehydrogenase activity4.37E-03
83GO:0004723: calcium-dependent protein serine/threonine phosphatase activity4.37E-03
84GO:0051082: unfolded protein binding4.60E-03
85GO:0009881: photoreceptor activity5.15E-03
86GO:0016597: amino acid binding5.63E-03
87GO:0052689: carboxylic ester hydrolase activity5.96E-03
88GO:0008312: 7S RNA binding5.99E-03
89GO:0043022: ribosome binding5.99E-03
90GO:0004033: aldo-keto reductase (NADP) activity5.99E-03
91GO:0005337: nucleoside transmembrane transporter activity5.99E-03
92GO:0008173: RNA methyltransferase activity6.87E-03
93GO:0008236: serine-type peptidase activity7.40E-03
94GO:0003723: RNA binding8.67E-03
95GO:0005381: iron ion transmembrane transporter activity8.75E-03
96GO:0003746: translation elongation factor activity9.89E-03
97GO:0005524: ATP binding1.02E-02
98GO:0003993: acid phosphatase activity1.03E-02
99GO:0047372: acylglycerol lipase activity1.08E-02
100GO:0004565: beta-galactosidase activity1.30E-02
101GO:0015095: magnesium ion transmembrane transporter activity1.30E-02
102GO:0051537: 2 iron, 2 sulfur cluster binding1.38E-02
103GO:0008266: poly(U) RNA binding1.42E-02
104GO:0003729: mRNA binding1.57E-02
105GO:0102336: 3-oxo-arachidoyl-CoA synthase activity1.66E-02
106GO:0102337: 3-oxo-cerotoyl-CoA synthase activity1.66E-02
107GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity1.66E-02
108GO:0015171: amino acid transmembrane transporter activity1.91E-02
109GO:0022891: substrate-specific transmembrane transporter activity2.33E-02
110GO:0005355: glucose transmembrane transporter activity3.07E-02
111GO:0010181: FMN binding3.07E-02
112GO:0004872: receptor activity3.23E-02
113GO:0016829: lyase activity3.33E-02
114GO:0004519: endonuclease activity3.81E-02
115GO:0016791: phosphatase activity3.88E-02
116GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.96E-02
117GO:0008483: transaminase activity4.05E-02
118GO:0005200: structural constituent of cytoskeleton4.05E-02
119GO:0015250: water channel activity4.40E-02
120GO:0008017: microtubule binding4.44E-02
121GO:0102483: scopolin beta-glucosidase activity4.94E-02
122GO:0003743: translation initiation factor activity4.94E-02
123GO:0030247: polysaccharide binding4.94E-02
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Gene type



Gene DE type