Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G18030

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0070178: D-serine metabolic process0.00E+00
2GO:0090071: negative regulation of ribosome biogenesis0.00E+00
3GO:0031116: positive regulation of microtubule polymerization0.00E+00
4GO:0007638: mechanosensory behavior0.00E+00
5GO:0042817: pyridoxal metabolic process0.00E+00
6GO:2001294: malonyl-CoA catabolic process0.00E+00
7GO:0006399: tRNA metabolic process0.00E+00
8GO:0009069: serine family amino acid metabolic process0.00E+00
9GO:0071311: cellular response to acetate0.00E+00
10GO:0015843: methylammonium transport0.00E+00
11GO:0070979: protein K11-linked ubiquitination0.00E+00
12GO:0071260: cellular response to mechanical stimulus0.00E+00
13GO:1905421: regulation of plant organ morphogenesis0.00E+00
14GO:0043488: regulation of mRNA stability0.00E+00
15GO:0030155: regulation of cell adhesion0.00E+00
16GO:0046460: neutral lipid biosynthetic process0.00E+00
17GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate0.00E+00
18GO:0046620: regulation of organ growth1.41E-08
19GO:0009733: response to auxin8.56E-08
20GO:0009734: auxin-activated signaling pathway1.82E-06
21GO:0009658: chloroplast organization1.00E-05
22GO:0040008: regulation of growth1.33E-05
23GO:0009926: auxin polar transport2.49E-04
24GO:2000012: regulation of auxin polar transport2.92E-04
25GO:0030488: tRNA methylation5.95E-04
26GO:0042372: phylloquinone biosynthetic process5.95E-04
27GO:0043266: regulation of potassium ion transport6.52E-04
28GO:0019478: D-amino acid catabolic process6.52E-04
29GO:0042371: vitamin K biosynthetic process6.52E-04
30GO:2000021: regulation of ion homeostasis6.52E-04
31GO:0034080: CENP-A containing nucleosome assembly6.52E-04
32GO:0000066: mitochondrial ornithine transport6.52E-04
33GO:1902458: positive regulation of stomatal opening6.52E-04
34GO:0006177: GMP biosynthetic process6.52E-04
35GO:0010729: positive regulation of hydrogen peroxide biosynthetic process6.52E-04
36GO:0006419: alanyl-tRNA aminoacylation6.52E-04
37GO:0000476: maturation of 4.5S rRNA6.52E-04
38GO:0000967: rRNA 5'-end processing6.52E-04
39GO:0051418: microtubule nucleation by microtubule organizing center6.52E-04
40GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process6.52E-04
41GO:0006400: tRNA modification7.61E-04
42GO:0009657: plastid organization1.15E-03
43GO:0000373: Group II intron splicing1.38E-03
44GO:0033566: gamma-tubulin complex localization1.40E-03
45GO:2000039: regulation of trichome morphogenesis1.40E-03
46GO:0071497: cellular response to freezing1.40E-03
47GO:1900033: negative regulation of trichome patterning1.40E-03
48GO:0009220: pyrimidine ribonucleotide biosynthetic process1.40E-03
49GO:1903426: regulation of reactive oxygen species biosynthetic process1.40E-03
50GO:0034470: ncRNA processing1.40E-03
51GO:0006739: NADP metabolic process1.40E-03
52GO:1900865: chloroplast RNA modification1.63E-03
53GO:0009638: phototropism1.63E-03
54GO:0006816: calcium ion transport2.20E-03
55GO:0006415: translational termination2.20E-03
56GO:0010015: root morphogenesis2.20E-03
57GO:0071230: cellular response to amino acid stimulus2.31E-03
58GO:0031145: anaphase-promoting complex-dependent catabolic process2.31E-03
59GO:0009150: purine ribonucleotide metabolic process2.31E-03
60GO:0006753: nucleoside phosphate metabolic process2.31E-03
61GO:0001578: microtubule bundle formation2.31E-03
62GO:0045493: xylan catabolic process2.31E-03
63GO:0006760: folic acid-containing compound metabolic process2.31E-03
64GO:0071398: cellular response to fatty acid2.31E-03
65GO:0007052: mitotic spindle organization2.31E-03
66GO:0048281: inflorescence morphogenesis2.31E-03
67GO:0051127: positive regulation of actin nucleation2.31E-03
68GO:1902448: positive regulation of shade avoidance2.31E-03
69GO:0006954: inflammatory response2.31E-03
70GO:0010020: chloroplast fission3.25E-03
71GO:0044211: CTP salvage3.36E-03
72GO:0008615: pyridoxine biosynthetic process3.36E-03
73GO:0015696: ammonium transport3.36E-03
74GO:0046739: transport of virus in multicellular host3.36E-03
75GO:0090307: mitotic spindle assembly3.36E-03
76GO:2000904: regulation of starch metabolic process3.36E-03
77GO:0010148: transpiration3.36E-03
78GO:0043572: plastid fission3.36E-03
79GO:2001141: regulation of RNA biosynthetic process3.36E-03
80GO:0016556: mRNA modification3.36E-03
81GO:0051415: interphase microtubule nucleation by interphase microtubule organizing center3.36E-03
82GO:0034508: centromere complex assembly3.36E-03
83GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly3.36E-03
84GO:0007231: osmosensory signaling pathway3.36E-03
85GO:0030071: regulation of mitotic metaphase/anaphase transition3.36E-03
86GO:0051639: actin filament network formation3.36E-03
87GO:0009226: nucleotide-sugar biosynthetic process3.36E-03
88GO:0009742: brassinosteroid mediated signaling pathway4.12E-03
89GO:0005992: trehalose biosynthetic process4.52E-03
90GO:0072488: ammonium transmembrane transport4.54E-03
91GO:0046656: folic acid biosynthetic process4.54E-03
92GO:0022622: root system development4.54E-03
93GO:0006734: NADH metabolic process4.54E-03
94GO:0044205: 'de novo' UMP biosynthetic process4.54E-03
95GO:0007020: microtubule nucleation4.54E-03
96GO:0044206: UMP salvage4.54E-03
97GO:1901141: regulation of lignin biosynthetic process4.54E-03
98GO:0048629: trichome patterning4.54E-03
99GO:0051764: actin crosslink formation4.54E-03
100GO:0051322: anaphase4.54E-03
101GO:0033500: carbohydrate homeostasis4.54E-03
102GO:0009904: chloroplast accumulation movement5.83E-03
103GO:0010236: plastoquinone biosynthetic process5.83E-03
104GO:0045038: protein import into chloroplast thylakoid membrane5.83E-03
105GO:0009107: lipoate biosynthetic process5.83E-03
106GO:0010158: abaxial cell fate specification5.83E-03
107GO:0032876: negative regulation of DNA endoreduplication5.83E-03
108GO:0046785: microtubule polymerization5.83E-03
109GO:0006730: one-carbon metabolic process6.02E-03
110GO:0031348: negative regulation of defense response6.02E-03
111GO:0016554: cytidine to uridine editing7.24E-03
112GO:0007275: multicellular organism development7.24E-03
113GO:0006206: pyrimidine nucleobase metabolic process7.24E-03
114GO:0032973: amino acid export7.24E-03
115GO:0018258: protein O-linked glycosylation via hydroxyproline7.24E-03
116GO:0006563: L-serine metabolic process7.24E-03
117GO:0010405: arabinogalactan protein metabolic process7.24E-03
118GO:0006655: phosphatidylglycerol biosynthetic process7.24E-03
119GO:0009789: positive regulation of abscisic acid-activated signaling pathway7.77E-03
120GO:0071555: cell wall organization8.02E-03
121GO:0010087: phloem or xylem histogenesis8.41E-03
122GO:0017148: negative regulation of translation8.75E-03
123GO:0009942: longitudinal axis specification8.75E-03
124GO:0034389: lipid particle organization8.75E-03
125GO:0046654: tetrahydrofolate biosynthetic process8.75E-03
126GO:0009903: chloroplast avoidance movement8.75E-03
127GO:0080086: stamen filament development8.75E-03
128GO:0009648: photoperiodism8.75E-03
129GO:0005975: carbohydrate metabolic process8.80E-03
130GO:0009958: positive gravitropism9.07E-03
131GO:0015937: coenzyme A biosynthetic process1.04E-02
132GO:0010050: vegetative phase change1.04E-02
133GO:0010196: nonphotochemical quenching1.04E-02
134GO:0030307: positive regulation of cell growth1.04E-02
135GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process1.04E-02
136GO:0010103: stomatal complex morphogenesis1.04E-02
137GO:0032880: regulation of protein localization1.04E-02
138GO:0048528: post-embryonic root development1.04E-02
139GO:0009772: photosynthetic electron transport in photosystem II1.04E-02
140GO:0043090: amino acid import1.04E-02
141GO:0070370: cellular heat acclimation1.04E-02
142GO:0007166: cell surface receptor signaling pathway1.07E-02
143GO:0032502: developmental process1.20E-02
144GO:0010583: response to cyclopentenone1.20E-02
145GO:0009850: auxin metabolic process1.21E-02
146GO:0010078: maintenance of root meristem identity1.21E-02
147GO:0009704: de-etiolation1.21E-02
148GO:0032875: regulation of DNA endoreduplication1.21E-02
149GO:2000070: regulation of response to water deprivation1.21E-02
150GO:0042255: ribosome assembly1.21E-02
151GO:0006353: DNA-templated transcription, termination1.21E-02
152GO:0070413: trehalose metabolism in response to stress1.21E-02
153GO:1901657: glycosyl compound metabolic process1.28E-02
154GO:0010252: auxin homeostasis1.37E-02
155GO:0009828: plant-type cell wall loosening1.37E-02
156GO:0006526: arginine biosynthetic process1.39E-02
157GO:0010497: plasmodesmata-mediated intercellular transport1.39E-02
158GO:0032544: plastid translation1.39E-02
159GO:0007389: pattern specification process1.39E-02
160GO:0043562: cellular response to nitrogen levels1.39E-02
161GO:0006002: fructose 6-phosphate metabolic process1.39E-02
162GO:0001558: regulation of cell growth1.39E-02
163GO:0071482: cellular response to light stimulus1.39E-02
164GO:0080144: amino acid homeostasis1.58E-02
165GO:0019432: triglyceride biosynthetic process1.58E-02
166GO:0000902: cell morphogenesis1.58E-02
167GO:0015780: nucleotide-sugar transport1.58E-02
168GO:0009051: pentose-phosphate shunt, oxidative branch1.58E-02
169GO:0031425: chloroplast RNA processing1.78E-02
170GO:0042761: very long-chain fatty acid biosynthetic process1.78E-02
171GO:0009627: systemic acquired resistance1.83E-02
172GO:0010411: xyloglucan metabolic process1.93E-02
173GO:0006535: cysteine biosynthetic process from serine1.99E-02
174GO:0045036: protein targeting to chloroplast1.99E-02
175GO:0009641: shade avoidance1.99E-02
176GO:0006949: syncytium formation1.99E-02
177GO:0006259: DNA metabolic process1.99E-02
178GO:0009299: mRNA transcription1.99E-02
179GO:0009773: photosynthetic electron transport in photosystem I2.21E-02
180GO:1903507: negative regulation of nucleic acid-templated transcription2.21E-02
181GO:0006352: DNA-templated transcription, initiation2.21E-02
182GO:0009684: indoleacetic acid biosynthetic process2.21E-02
183GO:0006265: DNA topological change2.21E-02
184GO:0016024: CDP-diacylglycerol biosynthetic process2.43E-02
185GO:0045037: protein import into chloroplast stroma2.43E-02
186GO:0010582: floral meristem determinacy2.43E-02
187GO:0006790: sulfur compound metabolic process2.43E-02
188GO:0048527: lateral root development2.47E-02
189GO:0010588: cotyledon vascular tissue pattern formation2.66E-02
190GO:0010628: positive regulation of gene expression2.66E-02
191GO:0006006: glucose metabolic process2.66E-02
192GO:0009785: blue light signaling pathway2.66E-02
193GO:0030036: actin cytoskeleton organization2.66E-02
194GO:0009725: response to hormone2.66E-02
195GO:0009637: response to blue light2.71E-02
196GO:0048467: gynoecium development2.90E-02
197GO:0010207: photosystem II assembly2.90E-02
198GO:0006839: mitochondrial transport3.09E-02
199GO:0071732: cellular response to nitric oxide3.15E-02
200GO:0010030: positive regulation of seed germination3.15E-02
201GO:0070588: calcium ion transmembrane transport3.15E-02
202GO:0006631: fatty acid metabolic process3.22E-02
203GO:0010025: wax biosynthetic process3.40E-02
204GO:0009833: plant-type primary cell wall biogenesis3.40E-02
205GO:0006071: glycerol metabolic process3.40E-02
206GO:0008283: cell proliferation3.50E-02
207GO:0051017: actin filament bundle assembly3.66E-02
208GO:0030150: protein import into mitochondrial matrix3.66E-02
209GO:0007010: cytoskeleton organization3.66E-02
210GO:0019344: cysteine biosynthetic process3.66E-02
211GO:0009116: nucleoside metabolic process3.66E-02
212GO:0009944: polarity specification of adaxial/abaxial axis3.66E-02
213GO:0006874: cellular calcium ion homeostasis3.93E-02
214GO:0009965: leaf morphogenesis3.93E-02
215GO:0043622: cortical microtubule organization3.93E-02
216GO:0051302: regulation of cell division3.93E-02
217GO:0016042: lipid catabolic process3.95E-02
218GO:0006855: drug transmembrane transport4.07E-02
219GO:0016998: cell wall macromolecule catabolic process4.20E-02
220GO:0009664: plant-type cell wall organization4.38E-02
221GO:2000022: regulation of jasmonic acid mediated signaling pathway4.48E-02
222GO:0010082: regulation of root meristem growth4.77E-02
223GO:0009693: ethylene biosynthetic process4.77E-02
224GO:0009686: gibberellin biosynthetic process4.77E-02
225GO:0071369: cellular response to ethylene stimulus4.77E-02
226GO:0001944: vasculature development4.77E-02
227GO:0009831: plant-type cell wall modification involved in multidimensional cell growth4.77E-02
228GO:0051603: proteolysis involved in cellular protein catabolic process4.86E-02
RankGO TermAdjusted P value
1GO:0004590: orotidine-5'-phosphate decarboxylase activity0.00E+00
2GO:0080176: xyloglucan 1,6-alpha-xylosidase activity0.00E+00
3GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity0.00E+00
4GO:0030378: serine racemase activity0.00E+00
5GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
6GO:0003941: L-serine ammonia-lyase activity0.00E+00
7GO:0015276: ligand-gated ion channel activity0.00E+00
8GO:0004056: argininosuccinate lyase activity0.00E+00
9GO:0008721: D-serine ammonia-lyase activity0.00E+00
10GO:0004358: glutamate N-acetyltransferase activity0.00E+00
11GO:0061634: alpha-D-xyloside xylohydrolase0.00E+00
12GO:0004588: orotate phosphoribosyltransferase activity0.00E+00
13GO:0008066: glutamate receptor activity6.52E-04
14GO:0004813: alanine-tRNA ligase activity6.52E-04
15GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity6.52E-04
16GO:0005290: L-histidine transmembrane transporter activity6.52E-04
17GO:0003867: 4-aminobutyrate transaminase activity6.52E-04
18GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity6.52E-04
19GO:0052857: NADPHX epimerase activity6.52E-04
20GO:0052856: NADHX epimerase activity6.52E-04
21GO:0050139: nicotinate-N-glucosyltransferase activity6.52E-04
22GO:0004733: pyridoxamine-phosphate oxidase activity6.52E-04
23GO:0010945: CoA pyrophosphatase activity6.52E-04
24GO:0051777: ent-kaurenoate oxidase activity6.52E-04
25GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity6.52E-04
26GO:0016788: hydrolase activity, acting on ester bonds1.32E-03
27GO:0003747: translation release factor activity1.38E-03
28GO:0004150: dihydroneopterin aldolase activity1.40E-03
29GO:0000064: L-ornithine transmembrane transporter activity1.40E-03
30GO:0050017: L-3-cyanoalanine synthase activity1.40E-03
31GO:0017118: lipoyltransferase activity1.40E-03
32GO:0004326: tetrahydrofolylpolyglutamate synthase activity1.40E-03
33GO:0043425: bHLH transcription factor binding1.40E-03
34GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity1.40E-03
35GO:0009977: proton motive force dependent protein transmembrane transporter activity1.40E-03
36GO:0016415: octanoyltransferase activity1.40E-03
37GO:0003938: IMP dehydrogenase activity1.40E-03
38GO:0102083: 7,8-dihydromonapterin aldolase activity1.40E-03
39GO:0080097: L-tryptophan:pyruvate aminotransferase activity1.40E-03
40GO:0004805: trehalose-phosphatase activity1.90E-03
41GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.93E-03
42GO:0004557: alpha-galactosidase activity2.31E-03
43GO:0052692: raffinose alpha-galactosidase activity2.31E-03
44GO:0070330: aromatase activity2.31E-03
45GO:0005262: calcium channel activity2.88E-03
46GO:0008893: guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity3.36E-03
47GO:0016149: translation release factor activity, codon specific3.36E-03
48GO:0015181: arginine transmembrane transporter activity3.36E-03
49GO:0047627: adenylylsulfatase activity3.36E-03
50GO:0043023: ribosomal large subunit binding3.36E-03
51GO:0015189: L-lysine transmembrane transporter activity3.36E-03
52GO:0016987: sigma factor activity4.54E-03
53GO:0043015: gamma-tubulin binding4.54E-03
54GO:0019199: transmembrane receptor protein kinase activity4.54E-03
55GO:0042277: peptide binding4.54E-03
56GO:0046556: alpha-L-arabinofuranosidase activity4.54E-03
57GO:0004659: prenyltransferase activity4.54E-03
58GO:0001053: plastid sigma factor activity4.54E-03
59GO:0004845: uracil phosphoribosyltransferase activity4.54E-03
60GO:0004345: glucose-6-phosphate dehydrogenase activity4.54E-03
61GO:0004045: aminoacyl-tRNA hydrolase activity4.54E-03
62GO:0009044: xylan 1,4-beta-xylosidase activity4.54E-03
63GO:0004176: ATP-dependent peptidase activity5.49E-03
64GO:0016846: carbon-sulfur lyase activity5.83E-03
65GO:0018685: alkane 1-monooxygenase activity5.83E-03
66GO:0004040: amidase activity5.83E-03
67GO:0016208: AMP binding7.24E-03
68GO:0042578: phosphoric ester hydrolase activity7.24E-03
69GO:0008519: ammonium transmembrane transporter activity7.24E-03
70GO:0004605: phosphatidate cytidylyltransferase activity7.24E-03
71GO:0080030: methyl indole-3-acetate esterase activity7.24E-03
72GO:1990714: hydroxyproline O-galactosyltransferase activity7.24E-03
73GO:0000210: NAD+ diphosphatase activity7.24E-03
74GO:0043621: protein self-association7.91E-03
75GO:0003730: mRNA 3'-UTR binding8.75E-03
76GO:0004144: diacylglycerol O-acyltransferase activity8.75E-03
77GO:0004723: calcium-dependent protein serine/threonine phosphatase activity8.75E-03
78GO:0004124: cysteine synthase activity8.75E-03
79GO:0008195: phosphatidate phosphatase activity8.75E-03
80GO:0004849: uridine kinase activity8.75E-03
81GO:0010181: FMN binding9.76E-03
82GO:0019899: enzyme binding1.04E-02
83GO:0003872: 6-phosphofructokinase activity1.04E-02
84GO:0005338: nucleotide-sugar transmembrane transporter activity1.04E-02
85GO:0043022: ribosome binding1.21E-02
86GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity1.39E-02
87GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity1.58E-02
88GO:0009672: auxin:proton symporter activity1.78E-02
89GO:0102483: scopolin beta-glucosidase activity1.93E-02
90GO:0004713: protein tyrosine kinase activity1.99E-02
91GO:0008327: methyl-CpG binding2.21E-02
92GO:0015238: drug transmembrane transporter activity2.25E-02
93GO:0016829: lyase activity2.42E-02
94GO:0000976: transcription regulatory region sequence-specific DNA binding2.43E-02
95GO:0000049: tRNA binding2.43E-02
96GO:0016614: oxidoreductase activity, acting on CH-OH group of donors2.47E-02
97GO:0004565: beta-galactosidase activity2.66E-02
98GO:0004022: alcohol dehydrogenase (NAD) activity2.66E-02
99GO:0010329: auxin efflux transmembrane transporter activity2.66E-02
100GO:0015266: protein channel activity2.66E-02
101GO:0004089: carbonate dehydratase activity2.66E-02
102GO:0052689: carboxylic ester hydrolase activity2.70E-02
103GO:0008083: growth factor activity2.90E-02
104GO:0008422: beta-glucosidase activity2.96E-02
105GO:0042393: histone binding3.09E-02
106GO:0015297: antiporter activity3.09E-02
107GO:0004970: ionotropic glutamate receptor activity3.15E-02
108GO:0005217: intracellular ligand-gated ion channel activity3.15E-02
109GO:0008017: microtubule binding3.47E-02
110GO:0004185: serine-type carboxypeptidase activity3.50E-02
111GO:0003714: transcription corepressor activity3.66E-02
112GO:0051536: iron-sulfur cluster binding3.66E-02
113GO:0031418: L-ascorbic acid binding3.66E-02
114GO:0005528: FK506 binding3.66E-02
115GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity4.48E-02
116GO:0004519: endonuclease activity4.64E-02
117GO:0016760: cellulose synthase (UDP-forming) activity4.77E-02
118GO:0030570: pectate lyase activity4.77E-02
119GO:0044212: transcription regulatory region DNA binding4.86E-02
120GO:0016740: transferase activity4.96E-02
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Gene type



Gene DE type