Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G18020

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1905421: regulation of plant organ morphogenesis0.00E+00
2GO:0043488: regulation of mRNA stability0.00E+00
3GO:0030155: regulation of cell adhesion0.00E+00
4GO:0046460: neutral lipid biosynthetic process0.00E+00
5GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate0.00E+00
6GO:0031116: positive regulation of microtubule polymerization0.00E+00
7GO:0070178: D-serine metabolic process0.00E+00
8GO:0090071: negative regulation of ribosome biogenesis0.00E+00
9GO:0007638: mechanosensory behavior0.00E+00
10GO:1905177: tracheary element differentiation0.00E+00
11GO:0006399: tRNA metabolic process0.00E+00
12GO:0009069: serine family amino acid metabolic process0.00E+00
13GO:0015843: methylammonium transport0.00E+00
14GO:0031222: arabinan catabolic process0.00E+00
15GO:0006429: leucyl-tRNA aminoacylation0.00E+00
16GO:0070979: protein K11-linked ubiquitination0.00E+00
17GO:0046620: regulation of organ growth1.49E-08
18GO:0009733: response to auxin1.56E-08
19GO:0009734: auxin-activated signaling pathway2.02E-06
20GO:0009658: chloroplast organization1.08E-05
21GO:0009657: plastid organization7.57E-05
22GO:0040008: regulation of growth9.99E-05
23GO:0000373: Group II intron splicing1.01E-04
24GO:0009926: auxin polar transport2.59E-04
25GO:2000012: regulation of auxin polar transport3.00E-04
26GO:0010020: chloroplast fission3.54E-04
27GO:0042372: phylloquinone biosynthetic process6.07E-04
28GO:0030488: tRNA methylation6.07E-04
29GO:0010729: positive regulation of hydrogen peroxide biosynthetic process6.60E-04
30GO:0006419: alanyl-tRNA aminoacylation6.60E-04
31GO:0000476: maturation of 4.5S rRNA6.60E-04
32GO:0000967: rRNA 5'-end processing6.60E-04
33GO:0051418: microtubule nucleation by microtubule organizing center6.60E-04
34GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process6.60E-04
35GO:0070509: calcium ion import6.60E-04
36GO:0043266: regulation of potassium ion transport6.60E-04
37GO:0010480: microsporocyte differentiation6.60E-04
38GO:0019478: D-amino acid catabolic process6.60E-04
39GO:0042371: vitamin K biosynthetic process6.60E-04
40GO:2000021: regulation of ion homeostasis6.60E-04
41GO:0006436: tryptophanyl-tRNA aminoacylation6.60E-04
42GO:0034080: CENP-A containing nucleosome assembly6.60E-04
43GO:0000066: mitochondrial ornithine transport6.60E-04
44GO:1902458: positive regulation of stomatal opening6.60E-04
45GO:0048528: post-embryonic root development7.76E-04
46GO:0006400: tRNA modification7.76E-04
47GO:0006730: one-carbon metabolic process7.91E-04
48GO:0006353: DNA-templated transcription, termination9.63E-04
49GO:0034470: ncRNA processing1.42E-03
50GO:0033566: gamma-tubulin complex localization1.42E-03
51GO:2000039: regulation of trichome morphogenesis1.42E-03
52GO:0071497: cellular response to freezing1.42E-03
53GO:1900033: negative regulation of trichome patterning1.42E-03
54GO:0009220: pyrimidine ribonucleotide biosynthetic process1.42E-03
55GO:1903426: regulation of reactive oxygen species biosynthetic process1.42E-03
56GO:0010252: auxin homeostasis2.21E-03
57GO:0010015: root morphogenesis2.25E-03
58GO:0006415: translational termination2.25E-03
59GO:0048281: inflorescence morphogenesis2.35E-03
60GO:0051127: positive regulation of actin nucleation2.35E-03
61GO:0006954: inflammatory response2.35E-03
62GO:0031145: anaphase-promoting complex-dependent catabolic process2.35E-03
63GO:0010623: programmed cell death involved in cell development2.35E-03
64GO:0009150: purine ribonucleotide metabolic process2.35E-03
65GO:0001578: microtubule bundle formation2.35E-03
66GO:0006760: folic acid-containing compound metabolic process2.35E-03
67GO:0071398: cellular response to fatty acid2.35E-03
68GO:0007052: mitotic spindle organization2.35E-03
69GO:0030071: regulation of mitotic metaphase/anaphase transition3.41E-03
70GO:0051639: actin filament network formation3.41E-03
71GO:0010239: chloroplast mRNA processing3.41E-03
72GO:0009226: nucleotide-sugar biosynthetic process3.41E-03
73GO:0044211: CTP salvage3.41E-03
74GO:0015696: ammonium transport3.41E-03
75GO:0046739: transport of virus in multicellular host3.41E-03
76GO:0090307: mitotic spindle assembly3.41E-03
77GO:2000904: regulation of starch metabolic process3.41E-03
78GO:0010148: transpiration3.41E-03
79GO:0043572: plastid fission3.41E-03
80GO:2001141: regulation of RNA biosynthetic process3.41E-03
81GO:0016556: mRNA modification3.41E-03
82GO:0051415: interphase microtubule nucleation by interphase microtubule organizing center3.41E-03
83GO:0034508: centromere complex assembly3.41E-03
84GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly3.41E-03
85GO:0007231: osmosensory signaling pathway3.41E-03
86GO:0070588: calcium ion transmembrane transport3.72E-03
87GO:0051764: actin crosslink formation4.60E-03
88GO:0051322: anaphase4.60E-03
89GO:0033500: carbohydrate homeostasis4.60E-03
90GO:0046656: folic acid biosynthetic process4.60E-03
91GO:0072488: ammonium transmembrane transport4.60E-03
92GO:0022622: root system development4.60E-03
93GO:0044205: 'de novo' UMP biosynthetic process4.60E-03
94GO:0010508: positive regulation of autophagy4.60E-03
95GO:0007020: microtubule nucleation4.60E-03
96GO:0044206: UMP salvage4.60E-03
97GO:1901141: regulation of lignin biosynthetic process4.60E-03
98GO:0048629: trichome patterning4.60E-03
99GO:0005992: trehalose biosynthetic process4.61E-03
100GO:0006418: tRNA aminoacylation for protein translation5.10E-03
101GO:0010158: abaxial cell fate specification5.92E-03
102GO:0032876: negative regulation of DNA endoreduplication5.92E-03
103GO:0046785: microtubule polymerization5.92E-03
104GO:0032543: mitochondrial translation5.92E-03
105GO:0009904: chloroplast accumulation movement5.92E-03
106GO:0010236: plastoquinone biosynthetic process5.92E-03
107GO:0045038: protein import into chloroplast thylakoid membrane5.92E-03
108GO:0009107: lipoate biosynthetic process5.92E-03
109GO:0016123: xanthophyll biosynthetic process5.92E-03
110GO:0031348: negative regulation of defense response6.15E-03
111GO:0006655: phosphatidylglycerol biosynthetic process7.35E-03
112GO:0008283: cell proliferation7.35E-03
113GO:0016554: cytidine to uridine editing7.35E-03
114GO:0006206: pyrimidine nucleobase metabolic process7.35E-03
115GO:0050665: hydrogen peroxide biosynthetic process7.35E-03
116GO:0032973: amino acid export7.35E-03
117GO:0018258: protein O-linked glycosylation via hydroxyproline7.35E-03
118GO:0006563: L-serine metabolic process7.35E-03
119GO:0010405: arabinogalactan protein metabolic process7.35E-03
120GO:0007275: multicellular organism development7.66E-03
121GO:0017148: negative regulation of translation8.89E-03
122GO:0009942: longitudinal axis specification8.89E-03
123GO:0046654: tetrahydrofolate biosynthetic process8.89E-03
124GO:0034389: lipid particle organization8.89E-03
125GO:0009903: chloroplast avoidance movement8.89E-03
126GO:1901259: chloroplast rRNA processing8.89E-03
127GO:0009854: oxidative photosynthetic carbon pathway8.89E-03
128GO:0080086: stamen filament development8.89E-03
129GO:0009648: photoperiodism8.89E-03
130GO:0005975: carbohydrate metabolic process9.28E-03
131GO:0009772: photosynthetic electron transport in photosystem II1.05E-02
132GO:0043090: amino acid import1.05E-02
133GO:0070370: cellular heat acclimation1.05E-02
134GO:0010050: vegetative phase change1.05E-02
135GO:0048437: floral organ development1.05E-02
136GO:0010196: nonphotochemical quenching1.05E-02
137GO:0030307: positive regulation of cell growth1.05E-02
138GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process1.05E-02
139GO:0010103: stomatal complex morphogenesis1.05E-02
140GO:0032880: regulation of protein localization1.05E-02
141GO:0007166: cell surface receptor signaling pathway1.10E-02
142GO:0010583: response to cyclopentenone1.23E-02
143GO:0006402: mRNA catabolic process1.23E-02
144GO:0009850: auxin metabolic process1.23E-02
145GO:0009704: de-etiolation1.23E-02
146GO:0032875: regulation of DNA endoreduplication1.23E-02
147GO:2000070: regulation of response to water deprivation1.23E-02
148GO:0042255: ribosome assembly1.23E-02
149GO:0070413: trehalose metabolism in response to stress1.23E-02
150GO:0031540: regulation of anthocyanin biosynthetic process1.23E-02
151GO:0032502: developmental process1.23E-02
152GO:1901657: glycosyl compound metabolic process1.31E-02
153GO:0009828: plant-type cell wall loosening1.40E-02
154GO:0006002: fructose 6-phosphate metabolic process1.41E-02
155GO:0001558: regulation of cell growth1.41E-02
156GO:0071482: cellular response to light stimulus1.41E-02
157GO:0009827: plant-type cell wall modification1.41E-02
158GO:0006526: arginine biosynthetic process1.41E-02
159GO:0010204: defense response signaling pathway, resistance gene-independent1.41E-02
160GO:0010497: plasmodesmata-mediated intercellular transport1.41E-02
161GO:0032544: plastid translation1.41E-02
162GO:0007389: pattern specification process1.41E-02
163GO:0009051: pentose-phosphate shunt, oxidative branch1.61E-02
164GO:0080144: amino acid homeostasis1.61E-02
165GO:0006098: pentose-phosphate shunt1.61E-02
166GO:0019432: triglyceride biosynthetic process1.61E-02
167GO:0000902: cell morphogenesis1.61E-02
168GO:0015780: nucleotide-sugar transport1.61E-02
169GO:0042761: very long-chain fatty acid biosynthetic process1.81E-02
170GO:0009638: phototropism1.81E-02
171GO:1900865: chloroplast RNA modification1.81E-02
172GO:0031425: chloroplast RNA processing1.81E-02
173GO:0009742: brassinosteroid mediated signaling pathway1.82E-02
174GO:0009627: systemic acquired resistance1.87E-02
175GO:0006535: cysteine biosynthetic process from serine2.02E-02
176GO:0045036: protein targeting to chloroplast2.02E-02
177GO:0009641: shade avoidance2.02E-02
178GO:0006949: syncytium formation2.02E-02
179GO:0006259: DNA metabolic process2.02E-02
180GO:0006265: DNA topological change2.24E-02
181GO:0006816: calcium ion transport2.24E-02
182GO:0009773: photosynthetic electron transport in photosystem I2.24E-02
183GO:1903507: negative regulation of nucleic acid-templated transcription2.24E-02
184GO:0006352: DNA-templated transcription, initiation2.24E-02
185GO:0048229: gametophyte development2.24E-02
186GO:0080167: response to karrikin2.40E-02
187GO:0006790: sulfur compound metabolic process2.47E-02
188GO:0016024: CDP-diacylglycerol biosynthetic process2.47E-02
189GO:0045037: protein import into chloroplast stroma2.47E-02
190GO:0010582: floral meristem determinacy2.47E-02
191GO:0010628: positive regulation of gene expression2.70E-02
192GO:0006006: glucose metabolic process2.70E-02
193GO:0009785: blue light signaling pathway2.70E-02
194GO:0010229: inflorescence development2.70E-02
195GO:0030036: actin cytoskeleton organization2.70E-02
196GO:0010075: regulation of meristem growth2.70E-02
197GO:0006094: gluconeogenesis2.70E-02
198GO:0009767: photosynthetic electron transport chain2.70E-02
199GO:0009637: response to blue light2.77E-02
200GO:0048467: gynoecium development2.95E-02
201GO:0010207: photosystem II assembly2.95E-02
202GO:0009934: regulation of meristem structural organization2.95E-02
203GO:0006839: mitochondrial transport3.16E-02
204GO:0071732: cellular response to nitric oxide3.20E-02
205GO:0090351: seedling development3.20E-02
206GO:0007623: circadian rhythm3.37E-02
207GO:0010025: wax biosynthetic process3.46E-02
208GO:0042023: DNA endoreduplication3.46E-02
209GO:0009833: plant-type primary cell wall biogenesis3.46E-02
210GO:0006071: glycerol metabolic process3.46E-02
211GO:0019344: cysteine biosynthetic process3.72E-02
212GO:0009116: nucleoside metabolic process3.72E-02
213GO:0009944: polarity specification of adaxial/abaxial axis3.72E-02
214GO:0051017: actin filament bundle assembly3.72E-02
215GO:0030150: protein import into mitochondrial matrix3.72E-02
216GO:0051302: regulation of cell division3.99E-02
217GO:0043622: cortical microtubule organization3.99E-02
218GO:0006825: copper ion transport3.99E-02
219GO:0009965: leaf morphogenesis4.01E-02
220GO:0016042: lipid catabolic process4.07E-02
221GO:0006855: drug transmembrane transport4.16E-02
222GO:0016998: cell wall macromolecule catabolic process4.27E-02
223GO:0009664: plant-type cell wall organization4.47E-02
224GO:2000022: regulation of jasmonic acid mediated signaling pathway4.55E-02
225GO:0009831: plant-type cell wall modification involved in multidimensional cell growth4.84E-02
226GO:0010082: regulation of root meristem growth4.84E-02
227GO:0009693: ethylene biosynthetic process4.84E-02
228GO:0009686: gibberellin biosynthetic process4.84E-02
229GO:0071369: cellular response to ethylene stimulus4.84E-02
230GO:0001944: vasculature development4.84E-02
231GO:0051603: proteolysis involved in cellular protein catabolic process4.96E-02
232GO:0006508: proteolysis4.97E-02
RankGO TermAdjusted P value
1GO:0004588: orotate phosphoribosyltransferase activity0.00E+00
2GO:0004590: orotidine-5'-phosphate decarboxylase activity0.00E+00
3GO:0004823: leucine-tRNA ligase activity0.00E+00
4GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity0.00E+00
5GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
6GO:0030378: serine racemase activity0.00E+00
7GO:0003941: L-serine ammonia-lyase activity0.00E+00
8GO:0004056: argininosuccinate lyase activity0.00E+00
9GO:0008721: D-serine ammonia-lyase activity0.00E+00
10GO:0004358: glutamate N-acetyltransferase activity0.00E+00
11GO:0004326: tetrahydrofolylpolyglutamate synthase activity1.88E-05
12GO:0043621: protein self-association3.02E-04
13GO:0050139: nicotinate-N-glucosyltransferase activity6.60E-04
14GO:0051777: ent-kaurenoate oxidase activity6.60E-04
15GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity6.60E-04
16GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity6.60E-04
17GO:0004813: alanine-tRNA ligase activity6.60E-04
18GO:0005290: L-histidine transmembrane transporter activity6.60E-04
19GO:0004008: copper-exporting ATPase activity6.60E-04
20GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity6.60E-04
21GO:0004830: tryptophan-tRNA ligase activity6.60E-04
22GO:0016788: hydrolase activity, acting on ester bonds1.37E-03
23GO:0003747: translation release factor activity1.40E-03
24GO:0102083: 7,8-dihydromonapterin aldolase activity1.42E-03
25GO:0004150: dihydroneopterin aldolase activity1.42E-03
26GO:0000064: L-ornithine transmembrane transporter activity1.42E-03
27GO:0050017: L-3-cyanoalanine synthase activity1.42E-03
28GO:0017118: lipoyltransferase activity1.42E-03
29GO:0009977: proton motive force dependent protein transmembrane transporter activity1.42E-03
30GO:0016415: octanoyltransferase activity1.42E-03
31GO:0004805: trehalose-phosphatase activity1.94E-03
32GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.00E-03
33GO:0070330: aromatase activity2.35E-03
34GO:0002161: aminoacyl-tRNA editing activity2.35E-03
35GO:0004557: alpha-galactosidase activity2.35E-03
36GO:0052692: raffinose alpha-galactosidase activity2.35E-03
37GO:0005262: calcium channel activity2.94E-03
38GO:0015189: L-lysine transmembrane transporter activity3.41E-03
39GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity3.41E-03
40GO:0016149: translation release factor activity, codon specific3.41E-03
41GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity3.41E-03
42GO:0015181: arginine transmembrane transporter activity3.41E-03
43GO:0047627: adenylylsulfatase activity3.41E-03
44GO:0043023: ribosomal large subunit binding3.41E-03
45GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity3.41E-03
46GO:0004045: aminoacyl-tRNA hydrolase activity4.60E-03
47GO:0016987: sigma factor activity4.60E-03
48GO:0043015: gamma-tubulin binding4.60E-03
49GO:0019199: transmembrane receptor protein kinase activity4.60E-03
50GO:0042277: peptide binding4.60E-03
51GO:0008891: glycolate oxidase activity4.60E-03
52GO:0046556: alpha-L-arabinofuranosidase activity4.60E-03
53GO:0004659: prenyltransferase activity4.60E-03
54GO:0001053: plastid sigma factor activity4.60E-03
55GO:0004845: uracil phosphoribosyltransferase activity4.60E-03
56GO:0004345: glucose-6-phosphate dehydrogenase activity4.60E-03
57GO:0031418: L-ascorbic acid binding4.61E-03
58GO:0004176: ATP-dependent peptidase activity5.61E-03
59GO:0018685: alkane 1-monooxygenase activity5.92E-03
60GO:0004040: amidase activity5.92E-03
61GO:0080030: methyl indole-3-acetate esterase activity7.35E-03
62GO:1990714: hydroxyproline O-galactosyltransferase activity7.35E-03
63GO:0004332: fructose-bisphosphate aldolase activity7.35E-03
64GO:0016208: AMP binding7.35E-03
65GO:0042578: phosphoric ester hydrolase activity7.35E-03
66GO:0008519: ammonium transmembrane transporter activity7.35E-03
67GO:0004605: phosphatidate cytidylyltransferase activity7.35E-03
68GO:0004812: aminoacyl-tRNA ligase activity7.94E-03
69GO:0008195: phosphatidate phosphatase activity8.89E-03
70GO:0004849: uridine kinase activity8.89E-03
71GO:0003730: mRNA 3'-UTR binding8.89E-03
72GO:0004144: diacylglycerol O-acyltransferase activity8.89E-03
73GO:0004656: procollagen-proline 4-dioxygenase activity8.89E-03
74GO:0004124: cysteine synthase activity8.89E-03
75GO:0005338: nucleotide-sugar transmembrane transporter activity1.05E-02
76GO:0019899: enzyme binding1.05E-02
77GO:0003872: 6-phosphofructokinase activity1.05E-02
78GO:0043022: ribosome binding1.23E-02
79GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity1.41E-02
80GO:0005375: copper ion transmembrane transporter activity1.41E-02
81GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity1.61E-02
82GO:0009672: auxin:proton symporter activity1.81E-02
83GO:0102483: scopolin beta-glucosidase activity1.97E-02
84GO:0004713: protein tyrosine kinase activity2.02E-02
85GO:0008327: methyl-CpG binding2.24E-02
86GO:0015238: drug transmembrane transporter activity2.30E-02
87GO:0000976: transcription regulatory region sequence-specific DNA binding2.47E-02
88GO:0000049: tRNA binding2.47E-02
89GO:0016829: lyase activity2.48E-02
90GO:0016614: oxidoreductase activity, acting on CH-OH group of donors2.53E-02
91GO:0004022: alcohol dehydrogenase (NAD) activity2.70E-02
92GO:0004565: beta-galactosidase activity2.70E-02
93GO:0010329: auxin efflux transmembrane transporter activity2.70E-02
94GO:0015266: protein channel activity2.70E-02
95GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism2.70E-02
96GO:0004089: carbonate dehydratase activity2.70E-02
97GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors2.77E-02
98GO:0052689: carboxylic ester hydrolase activity2.78E-02
99GO:0008083: growth factor activity2.95E-02
100GO:0008422: beta-glucosidase activity3.03E-02
101GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting3.13E-02
102GO:0042393: histone binding3.16E-02
103GO:0015297: antiporter activity3.18E-02
104GO:0004185: serine-type carboxypeptidase activity3.57E-02
105GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding3.66E-02
106GO:0005528: FK506 binding3.72E-02
107GO:0003714: transcription corepressor activity3.72E-02
108GO:0051536: iron-sulfur cluster binding3.72E-02
109GO:0033612: receptor serine/threonine kinase binding4.27E-02
110GO:0008408: 3'-5' exonuclease activity4.27E-02
111GO:0030570: pectate lyase activity4.84E-02
112GO:0016760: cellulose synthase (UDP-forming) activity4.84E-02
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Gene type



Gene DE type