Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G17660

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0008298: intracellular mRNA localization0.00E+00
2GO:0071474: cellular hyperosmotic response0.00E+00
3GO:1901918: negative regulation of exoribonuclease activity0.00E+00
4GO:0033494: ferulate metabolic process0.00E+00
5GO:0090470: shoot organ boundary specification0.00E+00
6GO:0016553: base conversion or substitution editing0.00E+00
7GO:0090279: regulation of calcium ion import0.00E+00
8GO:2000042: negative regulation of double-strand break repair via homologous recombination0.00E+00
9GO:0055114: oxidation-reduction process4.28E-07
10GO:0010143: cutin biosynthetic process1.84E-06
11GO:0010207: photosystem II assembly1.84E-06
12GO:0015995: chlorophyll biosynthetic process4.38E-06
13GO:0006021: inositol biosynthetic process5.85E-05
14GO:0046855: inositol phosphate dephosphorylation1.34E-04
15GO:0042549: photosystem II stabilization1.34E-04
16GO:0006631: fatty acid metabolic process1.96E-04
17GO:0006633: fatty acid biosynthetic process2.22E-04
18GO:0043489: RNA stabilization2.99E-04
19GO:1904966: positive regulation of vitamin E biosynthetic process2.99E-04
20GO:0000481: maturation of 5S rRNA2.99E-04
21GO:0015801: aromatic amino acid transport2.99E-04
22GO:1904964: positive regulation of phytol biosynthetic process2.99E-04
23GO:0043686: co-translational protein modification2.99E-04
24GO:0043087: regulation of GTPase activity2.99E-04
25GO:0046167: glycerol-3-phosphate biosynthetic process2.99E-04
26GO:0043007: maintenance of rDNA2.99E-04
27GO:1902458: positive regulation of stomatal opening2.99E-04
28GO:0034337: RNA folding2.99E-04
29GO:0010362: negative regulation of anion channel activity by blue light2.99E-04
30GO:0015969: guanosine tetraphosphate metabolic process2.99E-04
31GO:0031426: polycistronic mRNA processing2.99E-04
32GO:0016559: peroxisome fission3.02E-04
33GO:0006098: pentose-phosphate shunt4.46E-04
34GO:0010205: photoinhibition5.28E-04
35GO:0010541: acropetal auxin transport6.55E-04
36GO:0006650: glycerophospholipid metabolic process6.55E-04
37GO:0010155: regulation of proton transport6.55E-04
38GO:1903426: regulation of reactive oxygen species biosynthetic process6.55E-04
39GO:0051262: protein tetramerization6.55E-04
40GO:0035304: regulation of protein dephosphorylation6.55E-04
41GO:0010115: regulation of abscisic acid biosynthetic process6.55E-04
42GO:1902326: positive regulation of chlorophyll biosynthetic process6.55E-04
43GO:0016024: CDP-diacylglycerol biosynthetic process8.12E-04
44GO:0006790: sulfur compound metabolic process8.12E-04
45GO:0006094: gluconeogenesis9.19E-04
46GO:0044550: secondary metabolite biosynthetic process1.01E-03
47GO:0010160: formation of animal organ boundary1.06E-03
48GO:0044375: regulation of peroxisome size1.06E-03
49GO:0046621: negative regulation of organ growth1.06E-03
50GO:0046168: glycerol-3-phosphate catabolic process1.06E-03
51GO:0046854: phosphatidylinositol phosphorylation1.15E-03
52GO:0010371: regulation of gibberellin biosynthetic process1.52E-03
53GO:0006020: inositol metabolic process1.52E-03
54GO:0009152: purine ribonucleotide biosynthetic process1.52E-03
55GO:0046653: tetrahydrofolate metabolic process1.52E-03
56GO:0010239: chloroplast mRNA processing1.52E-03
57GO:0043481: anthocyanin accumulation in tissues in response to UV light1.52E-03
58GO:0033014: tetrapyrrole biosynthetic process1.52E-03
59GO:0006072: glycerol-3-phosphate metabolic process1.52E-03
60GO:0048511: rhythmic process1.72E-03
61GO:0032366: intracellular sterol transport2.04E-03
62GO:0010021: amylopectin biosynthetic process2.04E-03
63GO:0019464: glycine decarboxylation via glycine cleavage system2.04E-03
64GO:0006546: glycine catabolic process2.04E-03
65GO:0006564: L-serine biosynthetic process2.61E-03
66GO:0009904: chloroplast accumulation movement2.61E-03
67GO:0045038: protein import into chloroplast thylakoid membrane2.61E-03
68GO:0031365: N-terminal protein amino acid modification2.61E-03
69GO:0006465: signal peptide processing2.61E-03
70GO:0000304: response to singlet oxygen2.61E-03
71GO:0006520: cellular amino acid metabolic process2.81E-03
72GO:0006096: glycolytic process2.90E-03
73GO:0006014: D-ribose metabolic process3.22E-03
74GO:0010304: PSII associated light-harvesting complex II catabolic process3.22E-03
75GO:0006655: phosphatidylglycerol biosynthetic process3.22E-03
76GO:0060918: auxin transport3.22E-03
77GO:0009920: cell plate formation involved in plant-type cell wall biogenesis3.22E-03
78GO:0019252: starch biosynthetic process3.24E-03
79GO:0032502: developmental process3.70E-03
80GO:0006396: RNA processing3.82E-03
81GO:0000054: ribosomal subunit export from nucleus3.87E-03
82GO:0009903: chloroplast avoidance movement3.87E-03
83GO:0030488: tRNA methylation3.87E-03
84GO:0009648: photoperiodism3.87E-03
85GO:0009735: response to cytokinin4.04E-03
86GO:0009395: phospholipid catabolic process4.57E-03
87GO:0048437: floral organ development4.57E-03
88GO:0010027: thylakoid membrane organization5.00E-03
89GO:0009690: cytokinin metabolic process5.30E-03
90GO:0042255: ribosome assembly5.30E-03
91GO:0032508: DNA duplex unwinding5.30E-03
92GO:0006353: DNA-templated transcription, termination5.30E-03
93GO:2000070: regulation of response to water deprivation5.30E-03
94GO:0048564: photosystem I assembly5.30E-03
95GO:0005978: glycogen biosynthetic process5.30E-03
96GO:0009657: plastid organization6.08E-03
97GO:0006526: arginine biosynthetic process6.08E-03
98GO:0009932: cell tip growth6.08E-03
99GO:0015996: chlorophyll catabolic process6.08E-03
100GO:0007186: G-protein coupled receptor signaling pathway6.08E-03
101GO:0018298: protein-chromophore linkage6.53E-03
102GO:0048507: meristem development6.89E-03
103GO:0006783: heme biosynthetic process6.89E-03
104GO:0009821: alkaloid biosynthetic process6.89E-03
105GO:0051865: protein autoubiquitination6.89E-03
106GO:0090305: nucleic acid phosphodiester bond hydrolysis6.89E-03
107GO:0010206: photosystem II repair6.89E-03
108GO:0006811: ion transport7.20E-03
109GO:0007568: aging7.55E-03
110GO:0005982: starch metabolic process7.74E-03
111GO:0009638: phototropism7.74E-03
112GO:0006779: porphyrin-containing compound biosynthetic process7.74E-03
113GO:0009637: response to blue light8.28E-03
114GO:0006535: cysteine biosynthetic process from serine8.62E-03
115GO:0043069: negative regulation of programmed cell death8.62E-03
116GO:0008285: negative regulation of cell proliferation9.55E-03
117GO:0006415: translational termination9.55E-03
118GO:0019684: photosynthesis, light reaction9.55E-03
119GO:0009773: photosynthetic electron transport in photosystem I9.55E-03
120GO:0072593: reactive oxygen species metabolic process9.55E-03
121GO:0045037: protein import into chloroplast stroma1.05E-02
122GO:0008361: regulation of cell size1.05E-02
123GO:0009640: photomorphogenesis1.07E-02
124GO:0009785: blue light signaling pathway1.15E-02
125GO:0018107: peptidyl-threonine phosphorylation1.15E-02
126GO:0009718: anthocyanin-containing compound biosynthetic process1.15E-02
127GO:0009725: response to hormone1.15E-02
128GO:0009767: photosynthetic electron transport chain1.15E-02
129GO:0005975: carbohydrate metabolic process1.16E-02
130GO:0010540: basipetal auxin transport1.25E-02
131GO:0009266: response to temperature stimulus1.25E-02
132GO:0010020: chloroplast fission1.25E-02
133GO:0007031: peroxisome organization1.36E-02
134GO:0042343: indole glucosinolate metabolic process1.36E-02
135GO:0019853: L-ascorbic acid biosynthetic process1.36E-02
136GO:0006636: unsaturated fatty acid biosynthetic process1.47E-02
137GO:0006833: water transport1.47E-02
138GO:0010025: wax biosynthetic process1.47E-02
139GO:0042753: positive regulation of circadian rhythm1.47E-02
140GO:0019344: cysteine biosynthetic process1.58E-02
141GO:0010073: meristem maintenance1.69E-02
142GO:0003333: amino acid transmembrane transport1.81E-02
143GO:0098542: defense response to other organism1.81E-02
144GO:0010431: seed maturation1.81E-02
145GO:0031408: oxylipin biosynthetic process1.81E-02
146GO:0080092: regulation of pollen tube growth1.93E-02
147GO:0016226: iron-sulfur cluster assembly1.93E-02
148GO:0015979: photosynthesis2.00E-02
149GO:0010227: floral organ abscission2.05E-02
150GO:0019722: calcium-mediated signaling2.18E-02
151GO:0009306: protein secretion2.18E-02
152GO:0006817: phosphate ion transport2.18E-02
153GO:0048443: stamen development2.18E-02
154GO:0009742: brassinosteroid mediated signaling pathway2.19E-02
155GO:0055085: transmembrane transport2.40E-02
156GO:0034220: ion transmembrane transport2.44E-02
157GO:0010182: sugar mediated signaling pathway2.57E-02
158GO:0009958: positive gravitropism2.57E-02
159GO:0032259: methylation2.62E-02
160GO:0007018: microtubule-based movement2.71E-02
161GO:0009058: biosynthetic process2.72E-02
162GO:0006629: lipid metabolic process2.76E-02
163GO:0008654: phospholipid biosynthetic process2.85E-02
164GO:0009791: post-embryonic development2.85E-02
165GO:0030163: protein catabolic process3.28E-02
166GO:0006413: translational initiation3.32E-02
167GO:0046686: response to cadmium ion3.40E-02
168GO:0009639: response to red or far red light3.42E-02
169GO:0007623: circadian rhythm3.56E-02
170GO:0007267: cell-cell signaling3.58E-02
171GO:0009451: RNA modification3.64E-02
172GO:0016126: sterol biosynthetic process3.88E-02
173GO:0009788: negative regulation of abscisic acid-activated signaling pathway4.04E-02
174GO:0042128: nitrate assimilation4.20E-02
175GO:0010411: xyloglucan metabolic process4.36E-02
176GO:0016311: dephosphorylation4.52E-02
177GO:0010311: lateral root formation4.85E-02
178GO:0000160: phosphorelay signal transduction system4.85E-02
179GO:0009813: flavonoid biosynthetic process4.85E-02
RankGO TermAdjusted P value
1GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives0.00E+00
2GO:0008942: nitrite reductase [NAD(P)H] activity0.00E+00
3GO:0102193: protein-ribulosamine 3-kinase activity0.00E+00
4GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity0.00E+00
5GO:0004740: pyruvate dehydrogenase (acetyl-transferring) kinase activity0.00E+00
6GO:0046406: magnesium protoporphyrin IX methyltransferase activity0.00E+00
7GO:0019144: ADP-sugar diphosphatase activity0.00E+00
8GO:0009673: low-affinity phosphate transmembrane transporter activity0.00E+00
9GO:0016631: enoyl-[acyl-carrier-protein] reductase activity0.00E+00
10GO:0036361: racemase activity, acting on amino acids and derivatives0.00E+00
11GO:0050613: delta14-sterol reductase activity0.00E+00
12GO:0016491: oxidoreductase activity3.59E-08
13GO:0052832: inositol monophosphate 3-phosphatase activity4.08E-06
14GO:0008934: inositol monophosphate 1-phosphatase activity4.08E-06
15GO:0052833: inositol monophosphate 4-phosphatase activity4.08E-06
16GO:0016851: magnesium chelatase activity3.26E-05
17GO:0008266: poly(U) RNA binding6.59E-05
18GO:0000293: ferric-chelate reductase activity1.34E-04
19GO:0004366: glycerol-3-phosphate O-acyltransferase activity1.34E-04
20GO:0004332: fructose-bisphosphate aldolase activity1.34E-04
21GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity1.83E-04
22GO:0004325: ferrochelatase activity2.99E-04
23GO:0042586: peptide deformylase activity2.99E-04
24GO:0031957: very long-chain fatty acid-CoA ligase activity2.99E-04
25GO:0004328: formamidase activity2.99E-04
26GO:0010347: L-galactose-1-phosphate phosphatase activity2.99E-04
27GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity2.99E-04
28GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity2.99E-04
29GO:0005227: calcium activated cation channel activity2.99E-04
30GO:0080042: ADP-glucose pyrophosphohydrolase activity2.99E-04
31GO:0080132: fatty acid alpha-hydroxylase activity2.99E-04
32GO:0010242: oxygen evolving activity2.99E-04
33GO:0008728: GTP diphosphokinase activity6.55E-04
34GO:0050017: L-3-cyanoalanine synthase activity6.55E-04
35GO:0042389: omega-3 fatty acid desaturase activity6.55E-04
36GO:0080041: ADP-ribose pyrophosphohydrolase activity6.55E-04
37GO:0004617: phosphoglycerate dehydrogenase activity6.55E-04
38GO:0015173: aromatic amino acid transmembrane transporter activity6.55E-04
39GO:0034432: bis(5'-adenosyl)-pentaphosphatase activity6.55E-04
40GO:0003844: 1,4-alpha-glucan branching enzyme activity6.55E-04
41GO:0043024: ribosomal small subunit binding6.55E-04
42GO:0004081: bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity6.55E-04
43GO:0004565: beta-galactosidase activity9.19E-04
44GO:0016887: ATPase activity9.78E-04
45GO:0003955: NAD(P)H dehydrogenase (quinone) activity1.06E-03
46GO:0016742: hydroxymethyl-, formyl- and related transferase activity1.06E-03
47GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity1.06E-03
48GO:0008864: formyltetrahydrofolate deformylase activity1.06E-03
49GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor1.06E-03
50GO:0043169: cation binding1.06E-03
51GO:0005504: fatty acid binding1.06E-03
52GO:0050734: hydroxycinnamoyltransferase activity1.06E-03
53GO:0003993: acid phosphatase activity1.23E-03
54GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides1.52E-03
55GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor1.52E-03
56GO:0009882: blue light photoreceptor activity1.52E-03
57GO:0004375: glycine dehydrogenase (decarboxylating) activity1.52E-03
58GO:0048027: mRNA 5'-UTR binding1.52E-03
59GO:0035091: phosphatidylinositol binding1.77E-03
60GO:0043495: protein anchor2.04E-03
61GO:0045430: chalcone isomerase activity2.04E-03
62GO:0051287: NAD binding2.05E-03
63GO:0042802: identical protein binding2.09E-03
64GO:0003727: single-stranded RNA binding2.23E-03
65GO:0005275: amine transmembrane transporter activity2.61E-03
66GO:0035673: oligopeptide transmembrane transporter activity3.22E-03
67GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity3.22E-03
68GO:0004747: ribokinase activity3.87E-03
69GO:0005261: cation channel activity3.87E-03
70GO:0009927: histidine phosphotransfer kinase activity3.87E-03
71GO:0004124: cysteine synthase activity3.87E-03
72GO:0102391: decanoate--CoA ligase activity3.87E-03
73GO:0004467: long-chain fatty acid-CoA ligase activity4.57E-03
74GO:0019899: enzyme binding4.57E-03
75GO:0019843: rRNA binding4.89E-03
76GO:0005506: iron ion binding4.99E-03
77GO:0008865: fructokinase activity5.30E-03
78GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen5.79E-03
79GO:0008173: RNA methyltransferase activity6.08E-03
80GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water6.08E-03
81GO:0071949: FAD binding6.89E-03
82GO:0030955: potassium ion binding7.74E-03
83GO:0016844: strictosidine synthase activity7.74E-03
84GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity7.74E-03
85GO:0004743: pyruvate kinase activity7.74E-03
86GO:0016787: hydrolase activity8.30E-03
87GO:0005089: Rho guanyl-nucleotide exchange factor activity9.55E-03
88GO:0015198: oligopeptide transporter activity1.05E-02
89GO:0008081: phosphoric diester hydrolase activity1.15E-02
90GO:0010329: auxin efflux transmembrane transporter activity1.15E-02
91GO:0005315: inorganic phosphate transmembrane transporter activity1.15E-02
92GO:0031072: heat shock protein binding1.15E-02
93GO:0000155: phosphorelay sensor kinase activity1.15E-02
94GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.25E-02
95GO:0031624: ubiquitin conjugating enzyme binding1.25E-02
96GO:0016788: hydrolase activity, acting on ester bonds1.32E-02
97GO:0051536: iron-sulfur cluster binding1.58E-02
98GO:0004176: ATP-dependent peptidase activity1.81E-02
99GO:0052689: carboxylic ester hydrolase activity1.92E-02
100GO:0022891: substrate-specific transmembrane transporter activity2.05E-02
101GO:0030570: pectate lyase activity2.05E-02
102GO:0005524: ATP binding2.29E-02
103GO:0010181: FMN binding2.71E-02
104GO:0016853: isomerase activity2.71E-02
105GO:0019825: oxygen binding2.84E-02
106GO:0004872: receptor activity2.85E-02
107GO:0016762: xyloglucan:xyloglucosyl transferase activity2.99E-02
108GO:0048038: quinone binding2.99E-02
109GO:0004518: nuclease activity3.13E-02
110GO:0003729: mRNA binding3.15E-02
111GO:0016791: phosphatase activity3.42E-02
112GO:0020037: heme binding3.47E-02
113GO:0008237: metallopeptidase activity3.58E-02
114GO:0016722: oxidoreductase activity, oxidizing metal ions3.58E-02
115GO:0016597: amino acid binding3.73E-02
116GO:0008017: microtubule binding3.73E-02
117GO:0015250: water channel activity3.88E-02
118GO:0016168: chlorophyll binding4.04E-02
119GO:0016798: hydrolase activity, acting on glycosyl bonds4.36E-02
120GO:0042626: ATPase activity, coupled to transmembrane movement of substances4.51E-02
121GO:0008757: S-adenosylmethionine-dependent methyltransferase activity4.52E-02
122GO:0005096: GTPase activator activity4.85E-02
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Gene type



Gene DE type