GO Enrichment Analysis of Co-expressed Genes with
AT5G16715
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042407: cristae formation | 0.00E+00 |
| 2 | GO:0042817: pyridoxal metabolic process | 0.00E+00 |
| 3 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 4 | GO:0006429: leucyl-tRNA aminoacylation | 0.00E+00 |
| 5 | GO:1905421: regulation of plant organ morphogenesis | 0.00E+00 |
| 6 | GO:0030155: regulation of cell adhesion | 0.00E+00 |
| 7 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 8 | GO:0090071: negative regulation of ribosome biogenesis | 0.00E+00 |
| 9 | GO:0009658: chloroplast organization | 1.40E-07 |
| 10 | GO:0009657: plastid organization | 1.15E-06 |
| 11 | GO:0010020: chloroplast fission | 7.86E-06 |
| 12 | GO:1901259: chloroplast rRNA processing | 4.17E-05 |
| 13 | GO:0006353: DNA-templated transcription, termination | 7.29E-05 |
| 14 | GO:0006824: cobalt ion transport | 1.18E-04 |
| 15 | GO:0042371: vitamin K biosynthetic process | 1.18E-04 |
| 16 | GO:0006436: tryptophanyl-tRNA aminoacylation | 1.18E-04 |
| 17 | GO:0010729: positive regulation of hydrogen peroxide biosynthetic process | 1.18E-04 |
| 18 | GO:0006419: alanyl-tRNA aminoacylation | 1.18E-04 |
| 19 | GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process | 1.18E-04 |
| 20 | GO:0015712: hexose phosphate transport | 2.73E-04 |
| 21 | GO:0034755: iron ion transmembrane transport | 2.73E-04 |
| 22 | GO:0006423: cysteinyl-tRNA aminoacylation | 2.73E-04 |
| 23 | GO:1900871: chloroplast mRNA modification | 2.73E-04 |
| 24 | GO:0009220: pyrimidine ribonucleotide biosynthetic process | 2.73E-04 |
| 25 | GO:1904143: positive regulation of carotenoid biosynthetic process | 2.73E-04 |
| 26 | GO:0001682: tRNA 5'-leader removal | 2.73E-04 |
| 27 | GO:0006420: arginyl-tRNA aminoacylation | 2.73E-04 |
| 28 | GO:0006739: NADP metabolic process | 2.73E-04 |
| 29 | GO:0060359: response to ammonium ion | 2.73E-04 |
| 30 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 2.73E-04 |
| 31 | GO:0006418: tRNA aminoacylation for protein translation | 4.41E-04 |
| 32 | GO:0035436: triose phosphate transmembrane transport | 4.52E-04 |
| 33 | GO:0043157: response to cation stress | 4.52E-04 |
| 34 | GO:0005977: glycogen metabolic process | 4.52E-04 |
| 35 | GO:0048281: inflorescence morphogenesis | 4.52E-04 |
| 36 | GO:0009793: embryo development ending in seed dormancy | 5.26E-04 |
| 37 | GO:0006730: one-carbon metabolic process | 5.29E-04 |
| 38 | GO:0006164: purine nucleotide biosynthetic process | 6.47E-04 |
| 39 | GO:0010148: transpiration | 6.47E-04 |
| 40 | GO:0016556: mRNA modification | 6.47E-04 |
| 41 | GO:0008615: pyridoxine biosynthetic process | 6.47E-04 |
| 42 | GO:2001141: regulation of RNA biosynthetic process | 6.47E-04 |
| 43 | GO:0010239: chloroplast mRNA processing | 6.47E-04 |
| 44 | GO:0015713: phosphoglycerate transport | 8.60E-04 |
| 45 | GO:0006734: NADH metabolic process | 8.60E-04 |
| 46 | GO:0044205: 'de novo' UMP biosynthetic process | 8.60E-04 |
| 47 | GO:0010021: amylopectin biosynthetic process | 8.60E-04 |
| 48 | GO:0010583: response to cyclopentenone | 1.02E-03 |
| 49 | GO:0009630: gravitropism | 1.02E-03 |
| 50 | GO:0032543: mitochondrial translation | 1.08E-03 |
| 51 | GO:0010236: plastoquinone biosynthetic process | 1.08E-03 |
| 52 | GO:0010158: abaxial cell fate specification | 1.08E-03 |
| 53 | GO:0009790: embryo development | 1.12E-03 |
| 54 | GO:0042793: transcription from plastid promoter | 1.33E-03 |
| 55 | GO:0050665: hydrogen peroxide biosynthetic process | 1.33E-03 |
| 56 | GO:0009959: negative gravitropism | 1.33E-03 |
| 57 | GO:0010027: thylakoid membrane organization | 1.36E-03 |
| 58 | GO:0042372: phylloquinone biosynthetic process | 1.59E-03 |
| 59 | GO:0017148: negative regulation of translation | 1.59E-03 |
| 60 | GO:0009942: longitudinal axis specification | 1.59E-03 |
| 61 | GO:0009854: oxidative photosynthetic carbon pathway | 1.59E-03 |
| 62 | GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process | 1.87E-03 |
| 63 | GO:0070370: cellular heat acclimation | 1.87E-03 |
| 64 | GO:0006400: tRNA modification | 1.87E-03 |
| 65 | GO:0010103: stomatal complex morphogenesis | 1.87E-03 |
| 66 | GO:0009772: photosynthetic electron transport in photosystem II | 1.87E-03 |
| 67 | GO:0010050: vegetative phase change | 1.87E-03 |
| 68 | GO:0010196: nonphotochemical quenching | 1.87E-03 |
| 69 | GO:0070413: trehalose metabolism in response to stress | 2.16E-03 |
| 70 | GO:0009850: auxin metabolic process | 2.16E-03 |
| 71 | GO:0048564: photosystem I assembly | 2.16E-03 |
| 72 | GO:0009416: response to light stimulus | 2.24E-03 |
| 73 | GO:0001558: regulation of cell growth | 2.46E-03 |
| 74 | GO:0006526: arginine biosynthetic process | 2.46E-03 |
| 75 | GO:0010204: defense response signaling pathway, resistance gene-independent | 2.46E-03 |
| 76 | GO:0007389: pattern specification process | 2.46E-03 |
| 77 | GO:0009932: cell tip growth | 2.46E-03 |
| 78 | GO:0071482: cellular response to light stimulus | 2.46E-03 |
| 79 | GO:0006098: pentose-phosphate shunt | 2.78E-03 |
| 80 | GO:0010114: response to red light | 2.86E-03 |
| 81 | GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway | 3.12E-03 |
| 82 | GO:0043067: regulation of programmed cell death | 3.12E-03 |
| 83 | GO:0009098: leucine biosynthetic process | 3.12E-03 |
| 84 | GO:1900865: chloroplast RNA modification | 3.12E-03 |
| 85 | GO:0006508: proteolysis | 3.36E-03 |
| 86 | GO:0006259: DNA metabolic process | 3.46E-03 |
| 87 | GO:0009664: plant-type cell wall organization | 3.58E-03 |
| 88 | GO:0006265: DNA topological change | 3.82E-03 |
| 89 | GO:0009089: lysine biosynthetic process via diaminopimelate | 3.82E-03 |
| 90 | GO:0009073: aromatic amino acid family biosynthetic process | 3.82E-03 |
| 91 | GO:0006352: DNA-templated transcription, initiation | 3.82E-03 |
| 92 | GO:0010015: root morphogenesis | 3.82E-03 |
| 93 | GO:0006364: rRNA processing | 3.84E-03 |
| 94 | GO:0045037: protein import into chloroplast stroma | 4.19E-03 |
| 95 | GO:0010582: floral meristem determinacy | 4.19E-03 |
| 96 | GO:0006094: gluconeogenesis | 4.57E-03 |
| 97 | GO:0010207: photosystem II assembly | 4.97E-03 |
| 98 | GO:0090351: seedling development | 5.37E-03 |
| 99 | GO:0009944: polarity specification of adaxial/abaxial axis | 6.22E-03 |
| 100 | GO:0005992: trehalose biosynthetic process | 6.22E-03 |
| 101 | GO:0009116: nucleoside metabolic process | 6.22E-03 |
| 102 | GO:0051302: regulation of cell division | 6.66E-03 |
| 103 | GO:0019953: sexual reproduction | 6.66E-03 |
| 104 | GO:0015992: proton transport | 7.11E-03 |
| 105 | GO:0016226: iron-sulfur cluster assembly | 7.57E-03 |
| 106 | GO:0031348: negative regulation of defense response | 7.57E-03 |
| 107 | GO:0001944: vasculature development | 8.05E-03 |
| 108 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 9.02E-03 |
| 109 | GO:0008033: tRNA processing | 9.53E-03 |
| 110 | GO:0009451: RNA modification | 9.65E-03 |
| 111 | GO:0006662: glycerol ether metabolic process | 1.00E-02 |
| 112 | GO:0010197: polar nucleus fusion | 1.00E-02 |
| 113 | GO:0009741: response to brassinosteroid | 1.00E-02 |
| 114 | GO:0048544: recognition of pollen | 1.06E-02 |
| 115 | GO:0007059: chromosome segregation | 1.06E-02 |
| 116 | GO:0009646: response to absence of light | 1.06E-02 |
| 117 | GO:0019252: starch biosynthetic process | 1.11E-02 |
| 118 | GO:0002229: defense response to oomycetes | 1.16E-02 |
| 119 | GO:0032502: developmental process | 1.22E-02 |
| 120 | GO:0010252: auxin homeostasis | 1.33E-02 |
| 121 | GO:0009828: plant-type cell wall loosening | 1.33E-02 |
| 122 | GO:0071805: potassium ion transmembrane transport | 1.39E-02 |
| 123 | GO:0042254: ribosome biogenesis | 1.49E-02 |
| 124 | GO:0001666: response to hypoxia | 1.51E-02 |
| 125 | GO:0015995: chlorophyll biosynthetic process | 1.70E-02 |
| 126 | GO:0048481: plant ovule development | 1.82E-02 |
| 127 | GO:0009737: response to abscisic acid | 2.05E-02 |
| 128 | GO:0045087: innate immune response | 2.16E-02 |
| 129 | GO:0009637: response to blue light | 2.16E-02 |
| 130 | GO:0009853: photorespiration | 2.16E-02 |
| 131 | GO:0045454: cell redox homeostasis | 2.18E-02 |
| 132 | GO:0034599: cellular response to oxidative stress | 2.23E-02 |
| 133 | GO:0009926: auxin polar transport | 2.59E-02 |
| 134 | GO:0009965: leaf morphogenesis | 2.81E-02 |
| 135 | GO:0006812: cation transport | 3.04E-02 |
| 136 | GO:0006813: potassium ion transport | 3.20E-02 |
| 137 | GO:0051603: proteolysis involved in cellular protein catabolic process | 3.28E-02 |
| 138 | GO:0006096: glycolytic process | 3.60E-02 |
| 139 | GO:0009734: auxin-activated signaling pathway | 3.77E-02 |
| 140 | GO:0009409: response to cold | 3.78E-02 |
| 141 | GO:0009742: brassinosteroid mediated signaling pathway | 4.28E-02 |
| 142 | GO:0005975: carbohydrate metabolic process | 4.35E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
| 2 | GO:0004588: orotate phosphoribosyltransferase activity | 0.00E+00 |
| 3 | GO:0004590: orotidine-5'-phosphate decarboxylase activity | 0.00E+00 |
| 4 | GO:0004823: leucine-tRNA ligase activity | 0.00E+00 |
| 5 | GO:0004358: glutamate N-acetyltransferase activity | 0.00E+00 |
| 6 | GO:0003937: IMP cyclohydrolase activity | 0.00E+00 |
| 7 | GO:0004643: phosphoribosylaminoimidazolecarboxamide formyltransferase activity | 0.00E+00 |
| 8 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 7.07E-07 |
| 9 | GO:0043621: protein self-association | 2.29E-05 |
| 10 | GO:0004813: alanine-tRNA ligase activity | 1.18E-04 |
| 11 | GO:0052856: NADHX epimerase activity | 1.18E-04 |
| 12 | GO:0052857: NADPHX epimerase activity | 1.18E-04 |
| 13 | GO:0004830: tryptophan-tRNA ligase activity | 1.18E-04 |
| 14 | GO:0010285: L,L-diaminopimelate aminotransferase activity | 1.18E-04 |
| 15 | GO:0005227: calcium activated cation channel activity | 1.18E-04 |
| 16 | GO:0004733: pyridoxamine-phosphate oxidase activity | 1.18E-04 |
| 17 | GO:0019156: isoamylase activity | 2.73E-04 |
| 18 | GO:0003852: 2-isopropylmalate synthase activity | 2.73E-04 |
| 19 | GO:0004814: arginine-tRNA ligase activity | 2.73E-04 |
| 20 | GO:0004047: aminomethyltransferase activity | 2.73E-04 |
| 21 | GO:0004817: cysteine-tRNA ligase activity | 2.73E-04 |
| 22 | GO:0002161: aminoacyl-tRNA editing activity | 4.52E-04 |
| 23 | GO:0071917: triose-phosphate transmembrane transporter activity | 4.52E-04 |
| 24 | GO:0046524: sucrose-phosphate synthase activity | 4.52E-04 |
| 25 | GO:0004176: ATP-dependent peptidase activity | 4.85E-04 |
| 26 | GO:0016851: magnesium chelatase activity | 6.47E-04 |
| 27 | GO:0009678: hydrogen-translocating pyrophosphatase activity | 6.47E-04 |
| 28 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 6.47E-04 |
| 29 | GO:0043023: ribosomal large subunit binding | 6.47E-04 |
| 30 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 6.47E-04 |
| 31 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 6.47E-04 |
| 32 | GO:0004812: aminoacyl-tRNA ligase activity | 6.76E-04 |
| 33 | GO:0010181: FMN binding | 8.40E-04 |
| 34 | GO:0019199: transmembrane receptor protein kinase activity | 8.60E-04 |
| 35 | GO:0042277: peptide binding | 8.60E-04 |
| 36 | GO:0008891: glycolate oxidase activity | 8.60E-04 |
| 37 | GO:0015120: phosphoglycerate transmembrane transporter activity | 8.60E-04 |
| 38 | GO:0004659: prenyltransferase activity | 8.60E-04 |
| 39 | GO:0001053: plastid sigma factor activity | 8.60E-04 |
| 40 | GO:0016987: sigma factor activity | 8.60E-04 |
| 41 | GO:0019843: rRNA binding | 9.26E-04 |
| 42 | GO:0008237: metallopeptidase activity | 1.22E-03 |
| 43 | GO:0004556: alpha-amylase activity | 1.33E-03 |
| 44 | GO:0004332: fructose-bisphosphate aldolase activity | 1.33E-03 |
| 45 | GO:0004526: ribonuclease P activity | 1.33E-03 |
| 46 | GO:0004427: inorganic diphosphatase activity | 1.87E-03 |
| 47 | GO:0043022: ribosome binding | 2.16E-03 |
| 48 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 2.46E-03 |
| 49 | GO:0003723: RNA binding | 2.59E-03 |
| 50 | GO:0009672: auxin:proton symporter activity | 3.12E-03 |
| 51 | GO:0005381: iron ion transmembrane transporter activity | 3.12E-03 |
| 52 | GO:0004805: trehalose-phosphatase activity | 3.46E-03 |
| 53 | GO:0000049: tRNA binding | 4.19E-03 |
| 54 | GO:0010329: auxin efflux transmembrane transporter activity | 4.57E-03 |
| 55 | GO:0004565: beta-galactosidase activity | 4.57E-03 |
| 56 | GO:0005525: GTP binding | 4.78E-03 |
| 57 | GO:0003924: GTPase activity | 5.14E-03 |
| 58 | GO:0004519: endonuclease activity | 5.72E-03 |
| 59 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 5.79E-03 |
| 60 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 5.79E-03 |
| 61 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 5.79E-03 |
| 62 | GO:0015079: potassium ion transmembrane transporter activity | 6.66E-03 |
| 63 | GO:0008408: 3'-5' exonuclease activity | 7.11E-03 |
| 64 | GO:0016829: lyase activity | 7.39E-03 |
| 65 | GO:0016887: ATPase activity | 8.96E-03 |
| 66 | GO:0047134: protein-disulfide reductase activity | 9.02E-03 |
| 67 | GO:0004527: exonuclease activity | 1.00E-02 |
| 68 | GO:0005355: glucose transmembrane transporter activity | 1.06E-02 |
| 69 | GO:0004791: thioredoxin-disulfide reductase activity | 1.06E-02 |
| 70 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.28E-02 |
| 71 | GO:0016791: phosphatase activity | 1.33E-02 |
| 72 | GO:0008483: transaminase activity | 1.39E-02 |
| 73 | GO:0000287: magnesium ion binding | 1.44E-02 |
| 74 | GO:0016597: amino acid binding | 1.45E-02 |
| 75 | GO:0004222: metalloendopeptidase activity | 1.96E-02 |
| 76 | GO:0003746: translation elongation factor activity | 2.16E-02 |
| 77 | GO:0005524: ATP binding | 2.18E-02 |
| 78 | GO:0004185: serine-type carboxypeptidase activity | 2.59E-02 |
| 79 | GO:0005198: structural molecule activity | 2.81E-02 |
| 80 | GO:0005215: transporter activity | 2.94E-02 |
| 81 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 3.20E-02 |
| 82 | GO:0004650: polygalacturonase activity | 3.85E-02 |
| 83 | GO:0015035: protein disulfide oxidoreductase activity | 4.19E-02 |
| 84 | GO:0008026: ATP-dependent helicase activity | 4.28E-02 |