Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G14260

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0007638: mechanosensory behavior0.00E+00
2GO:0006003: fructose 2,6-bisphosphate metabolic process0.00E+00
3GO:0010480: microsporocyte differentiation0.00E+00
4GO:0097164: ammonium ion metabolic process0.00E+00
5GO:0045184: establishment of protein localization0.00E+00
6GO:0007172: signal complex assembly0.00E+00
7GO:0006399: tRNA metabolic process0.00E+00
8GO:0015843: methylammonium transport0.00E+00
9GO:0046719: regulation by virus of viral protein levels in host cell0.00E+00
10GO:0010422: regulation of brassinosteroid biosynthetic process0.00E+00
11GO:0009606: tropism0.00E+00
12GO:0018131: oxazole or thiazole biosynthetic process0.00E+00
13GO:0010068: protoderm histogenesis0.00E+00
14GO:0009157: deoxyribonucleoside monophosphate biosynthetic process0.00E+00
15GO:1903224: regulation of endodermal cell differentiation0.00E+00
16GO:1901698: response to nitrogen compound0.00E+00
17GO:0009658: chloroplast organization2.31E-08
18GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway7.70E-06
19GO:0007389: pattern specification process4.50E-05
20GO:0006468: protein phosphorylation5.22E-05
21GO:0009734: auxin-activated signaling pathway9.48E-05
22GO:0009926: auxin polar transport1.31E-04
23GO:0044205: 'de novo' UMP biosynthetic process1.52E-04
24GO:0032502: developmental process1.52E-04
25GO:2000038: regulation of stomatal complex development1.52E-04
26GO:0009934: regulation of meristem structural organization2.25E-04
27GO:0009451: RNA modification2.85E-04
28GO:0042793: transcription from plastid promoter3.27E-04
29GO:0000160: phosphorelay signal transduction system4.32E-04
30GO:0009099: valine biosynthetic process4.36E-04
31GO:0009082: branched-chain amino acid biosynthetic process4.36E-04
32GO:0016998: cell wall macromolecule catabolic process4.58E-04
33GO:0090558: plant epidermis development5.29E-04
34GO:0034971: histone H3-R17 methylation5.29E-04
35GO:0035987: endodermal cell differentiation5.29E-04
36GO:0043609: regulation of carbon utilization5.29E-04
37GO:0006436: tryptophanyl-tRNA aminoacylation5.29E-04
38GO:0034757: negative regulation of iron ion transport5.29E-04
39GO:0034970: histone H3-R2 methylation5.29E-04
40GO:0042659: regulation of cell fate specification5.29E-04
41GO:0034972: histone H3-R26 methylation5.29E-04
42GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic5.29E-04
43GO:0006955: immune response5.59E-04
44GO:0048437: floral organ development5.59E-04
45GO:0042255: ribosome assembly6.96E-04
46GO:0046620: regulation of organ growth6.96E-04
47GO:0009097: isoleucine biosynthetic process8.48E-04
48GO:0006002: fructose 6-phosphate metabolic process8.48E-04
49GO:0009646: response to absence of light9.49E-04
50GO:0000373: Group II intron splicing1.01E-03
51GO:1902326: positive regulation of chlorophyll biosynthetic process1.14E-03
52GO:0009662: etioplast organization1.14E-03
53GO:0010434: bract formation1.14E-03
54GO:0009220: pyrimidine ribonucleotide biosynthetic process1.14E-03
55GO:1904143: positive regulation of carotenoid biosynthetic process1.14E-03
56GO:0048439: flower morphogenesis1.14E-03
57GO:0080183: response to photooxidative stress1.14E-03
58GO:0071258: cellular response to gravity1.14E-03
59GO:0006529: asparagine biosynthetic process1.14E-03
60GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine1.14E-03
61GO:2000123: positive regulation of stomatal complex development1.14E-03
62GO:0010254: nectary development1.14E-03
63GO:0070981: L-asparagine biosynthetic process1.14E-03
64GO:0060359: response to ammonium ion1.14E-03
65GO:0010271: regulation of chlorophyll catabolic process1.14E-03
66GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.19E-03
67GO:0042761: very long-chain fatty acid biosynthetic process1.19E-03
68GO:0010583: response to cyclopentenone1.23E-03
69GO:0009736: cytokinin-activated signaling pathway1.34E-03
70GO:0010252: auxin homeostasis1.44E-03
71GO:0007166: cell surface receptor signaling pathway1.57E-03
72GO:0048229: gametophyte development1.61E-03
73GO:0009089: lysine biosynthetic process via diaminopimelate1.61E-03
74GO:0010582: floral meristem determinacy1.84E-03
75GO:1901562: response to paraquat1.87E-03
76GO:0042780: tRNA 3'-end processing1.87E-03
77GO:0001578: microtubule bundle formation1.87E-03
78GO:0071705: nitrogen compound transport1.87E-03
79GO:0043157: response to cation stress1.87E-03
80GO:0009954: proximal/distal pattern formation1.87E-03
81GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic1.87E-03
82GO:0080117: secondary growth1.87E-03
83GO:0051127: positive regulation of actin nucleation1.87E-03
84GO:0090708: specification of plant organ axis polarity1.87E-03
85GO:0006000: fructose metabolic process1.87E-03
86GO:0010075: regulation of meristem growth2.10E-03
87GO:0010411: xyloglucan metabolic process2.22E-03
88GO:0010020: chloroplast fission2.37E-03
89GO:0010207: photosystem II assembly2.37E-03
90GO:0051289: protein homotetramerization2.70E-03
91GO:0043572: plastid fission2.70E-03
92GO:0031048: chromatin silencing by small RNA2.70E-03
93GO:2001141: regulation of RNA biosynthetic process2.70E-03
94GO:0016556: mRNA modification2.70E-03
95GO:1902476: chloride transmembrane transport2.70E-03
96GO:0051513: regulation of monopolar cell growth2.70E-03
97GO:0007231: osmosensory signaling pathway2.70E-03
98GO:0051639: actin filament network formation2.70E-03
99GO:0009800: cinnamic acid biosynthetic process2.70E-03
100GO:0010239: chloroplast mRNA processing2.70E-03
101GO:0048645: animal organ formation2.70E-03
102GO:0044211: CTP salvage2.70E-03
103GO:0019048: modulation by virus of host morphology or physiology2.70E-03
104GO:0015696: ammonium transport2.70E-03
105GO:0046739: transport of virus in multicellular host2.70E-03
106GO:2000904: regulation of starch metabolic process2.70E-03
107GO:0005992: trehalose biosynthetic process3.29E-03
108GO:0009944: polarity specification of adaxial/abaxial axis3.29E-03
109GO:0006418: tRNA aminoacylation for protein translation3.63E-03
110GO:0051567: histone H3-K9 methylation3.64E-03
111GO:0044206: UMP salvage3.64E-03
112GO:0009165: nucleotide biosynthetic process3.64E-03
113GO:0051764: actin crosslink formation3.64E-03
114GO:0051322: anaphase3.64E-03
115GO:0015846: polyamine transport3.64E-03
116GO:0030104: water homeostasis3.64E-03
117GO:0071249: cellular response to nitrate3.64E-03
118GO:0033500: carbohydrate homeostasis3.64E-03
119GO:0072488: ammonium transmembrane transport3.64E-03
120GO:0071555: cell wall organization3.76E-03
121GO:0048497: maintenance of floral organ identity4.67E-03
122GO:0006544: glycine metabolic process4.67E-03
123GO:1902183: regulation of shoot apical meristem development4.67E-03
124GO:0010158: abaxial cell fate specification4.67E-03
125GO:0048578: positive regulation of long-day photoperiodism, flowering4.67E-03
126GO:0016131: brassinosteroid metabolic process4.67E-03
127GO:0032876: negative regulation of DNA endoreduplication4.67E-03
128GO:0030308: negative regulation of cell growth4.67E-03
129GO:0010375: stomatal complex patterning4.67E-03
130GO:0010082: regulation of root meristem growth4.77E-03
131GO:0042546: cell wall biogenesis5.00E-03
132GO:0007623: circadian rhythm5.34E-03
133GO:0010315: auxin efflux5.79E-03
134GO:0016458: gene silencing5.79E-03
135GO:0006559: L-phenylalanine catabolic process5.79E-03
136GO:0009635: response to herbicide5.79E-03
137GO:0006206: pyrimidine nucleobase metabolic process5.79E-03
138GO:0018258: protein O-linked glycosylation via hydroxyproline5.79E-03
139GO:0006563: L-serine metabolic process5.79E-03
140GO:0009228: thiamine biosynthetic process5.79E-03
141GO:0010405: arabinogalactan protein metabolic process5.79E-03
142GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway5.79E-03
143GO:0009959: negative gravitropism5.79E-03
144GO:0009913: epidermal cell differentiation5.79E-03
145GO:0006655: phosphatidylglycerol biosynthetic process5.79E-03
146GO:0006139: nucleobase-containing compound metabolic process5.79E-03
147GO:0048831: regulation of shoot system development5.79E-03
148GO:0048653: anther development6.09E-03
149GO:0009416: response to light stimulus6.98E-03
150GO:0009942: longitudinal axis specification6.99E-03
151GO:0048509: regulation of meristem development6.99E-03
152GO:0030488: tRNA methylation6.99E-03
153GO:1901259: chloroplast rRNA processing6.99E-03
154GO:2000037: regulation of stomatal complex patterning6.99E-03
155GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity6.99E-03
156GO:2000067: regulation of root morphogenesis6.99E-03
157GO:0008380: RNA splicing6.99E-03
158GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process8.28E-03
159GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway8.28E-03
160GO:0009610: response to symbiotic fungus8.28E-03
161GO:0006821: chloride transport8.28E-03
162GO:0010050: vegetative phase change8.28E-03
163GO:0010444: guard mother cell differentiation8.28E-03
164GO:0048364: root development8.38E-03
165GO:0009630: gravitropism8.69E-03
166GO:0009787: regulation of abscisic acid-activated signaling pathway9.64E-03
167GO:0009704: de-etiolation9.64E-03
168GO:0030162: regulation of proteolysis9.64E-03
169GO:0006353: DNA-templated transcription, termination9.64E-03
170GO:0048766: root hair initiation9.64E-03
171GO:0070413: trehalose metabolism in response to stress9.64E-03
172GO:0055075: potassium ion homeostasis9.64E-03
173GO:0048564: photosystem I assembly9.64E-03
174GO:0006402: mRNA catabolic process9.64E-03
175GO:0001522: pseudouridine synthesis9.64E-03
176GO:0009850: auxin metabolic process9.64E-03
177GO:0006508: proteolysis1.00E-02
178GO:0006526: arginine biosynthetic process1.11E-02
179GO:0010497: plasmodesmata-mediated intercellular transport1.11E-02
180GO:0009657: plastid organization1.11E-02
181GO:0071482: cellular response to light stimulus1.11E-02
182GO:0015996: chlorophyll catabolic process1.11E-02
183GO:0010052: guard cell differentiation1.11E-02
184GO:0009827: plant-type cell wall modification1.11E-02
185GO:0051607: defense response to virus1.12E-02
186GO:0030154: cell differentiation1.24E-02
187GO:0000902: cell morphogenesis1.26E-02
188GO:0009051: pentose-phosphate shunt, oxidative branch1.26E-02
189GO:2000024: regulation of leaf development1.26E-02
190GO:0009733: response to auxin1.32E-02
191GO:0031425: chloroplast RNA processing1.42E-02
192GO:0009638: phototropism1.42E-02
193GO:2000280: regulation of root development1.42E-02
194GO:0035999: tetrahydrofolate interconversion1.42E-02
195GO:0030422: production of siRNA involved in RNA interference1.58E-02
196GO:0009641: shade avoidance1.58E-02
197GO:0006259: DNA metabolic process1.58E-02
198GO:0006352: DNA-templated transcription, initiation1.75E-02
199GO:0006265: DNA topological change1.75E-02
200GO:0006816: calcium ion transport1.75E-02
201GO:0009790: embryo development1.78E-02
202GO:0016024: CDP-diacylglycerol biosynthetic process1.93E-02
203GO:0045037: protein import into chloroplast stroma1.93E-02
204GO:0008361: regulation of cell size1.93E-02
205GO:0015706: nitrate transport1.93E-02
206GO:0040008: regulation of growth2.07E-02
207GO:0006006: glucose metabolic process2.12E-02
208GO:0009785: blue light signaling pathway2.12E-02
209GO:0030036: actin cytoskeleton organization2.12E-02
210GO:0050826: response to freezing2.12E-02
211GO:0009767: photosynthetic electron transport chain2.12E-02
212GO:0006541: glutamine metabolic process2.31E-02
213GO:0010167: response to nitrate2.50E-02
214GO:0070588: calcium ion transmembrane transport2.50E-02
215GO:0006071: glycerol metabolic process2.70E-02
216GO:0006833: water transport2.70E-02
217GO:0010025: wax biosynthetic process2.70E-02
218GO:0051017: actin filament bundle assembly2.91E-02
219GO:0009116: nucleoside metabolic process2.91E-02
220GO:0006825: copper ion transport3.12E-02
221GO:0051302: regulation of cell division3.12E-02
222GO:0019953: sexual reproduction3.12E-02
223GO:0008299: isoprenoid biosynthetic process3.12E-02
224GO:0006306: DNA methylation3.34E-02
225GO:0051603: proteolysis involved in cellular protein catabolic process3.54E-02
226GO:0080092: regulation of pollen tube growth3.56E-02
227GO:0009909: regulation of flower development3.78E-02
228GO:0006417: regulation of translation3.78E-02
229GO:0071215: cellular response to abscisic acid stimulus3.79E-02
230GO:0010227: floral organ abscission3.79E-02
231GO:0006284: base-excision repair4.02E-02
232GO:0007275: multicellular organism development4.16E-02
233GO:0048316: seed development4.17E-02
234GO:0048367: shoot system development4.17E-02
235GO:0070417: cellular response to cold4.26E-02
236GO:0008033: tRNA processing4.50E-02
237GO:0042335: cuticle development4.50E-02
238GO:0010087: phloem or xylem histogenesis4.50E-02
239GO:0042631: cellular response to water deprivation4.50E-02
240GO:0000226: microtubule cytoskeleton organization4.50E-02
241GO:0009723: response to ethylene4.52E-02
242GO:0009553: embryo sac development4.71E-02
243GO:0048868: pollen tube development4.75E-02
244GO:0006342: chromatin silencing4.75E-02
245GO:0009741: response to brassinosteroid4.75E-02
246GO:0009958: positive gravitropism4.75E-02
247GO:0080167: response to karrikin4.92E-02
248GO:0006814: sodium ion transport4.99E-02
249GO:0007059: chromosome segregation4.99E-02
RankGO TermAdjusted P value
1GO:0004056: argininosuccinate lyase activity0.00E+00
2GO:0070009: serine-type aminopeptidase activity0.00E+00
3GO:0019136: deoxynucleoside kinase activity0.00E+00
4GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity0.00E+00
5GO:0004588: orotate phosphoribosyltransferase activity0.00E+00
6GO:0004590: orotidine-5'-phosphate decarboxylase activity0.00E+00
7GO:0019808: polyamine binding0.00E+00
8GO:0003873: 6-phosphofructo-2-kinase activity0.00E+00
9GO:0042834: peptidoglycan binding0.00E+00
10GO:0009672: auxin:proton symporter activity7.99E-05
11GO:0005089: Rho guanyl-nucleotide exchange factor activity1.28E-04
12GO:0010329: auxin efflux transmembrane transporter activity1.89E-04
13GO:0016773: phosphotransferase activity, alcohol group as acceptor2.32E-04
14GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.32E-04
15GO:0004674: protein serine/threonine kinase activity2.91E-04
16GO:0033612: receptor serine/threonine kinase binding4.58E-04
17GO:0004672: protein kinase activity4.93E-04
18GO:0004008: copper-exporting ATPase activity5.29E-04
19GO:0004071: aspartate-ammonia ligase activity5.29E-04
20GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity5.29E-04
21GO:0004830: tryptophan-tRNA ligase activity5.29E-04
22GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity5.29E-04
23GO:0010285: L,L-diaminopimelate aminotransferase activity5.29E-04
24GO:0004160: dihydroxy-acid dehydratase activity5.29E-04
25GO:0050139: nicotinate-N-glucosyltransferase activity5.29E-04
26GO:0008836: diaminopimelate decarboxylase activity5.29E-04
27GO:0004088: carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity5.29E-04
28GO:0046429: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity5.29E-04
29GO:0003984: acetolactate synthase activity5.29E-04
30GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity5.29E-04
31GO:0003727: single-stranded RNA binding6.44E-04
32GO:0004519: endonuclease activity7.61E-04
33GO:0043621: protein self-association9.62E-04
34GO:0016762: xyloglucan:xyloglucosyl transferase activity1.13E-03
35GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity1.14E-03
36GO:0009884: cytokinin receptor activity1.14E-03
37GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity1.14E-03
38GO:0035241: protein-arginine omega-N monomethyltransferase activity1.14E-03
39GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity1.14E-03
40GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity1.14E-03
41GO:0000156: phosphorelay response regulator activity1.33E-03
42GO:0005524: ATP binding1.36E-03
43GO:0004805: trehalose-phosphatase activity1.39E-03
44GO:0042781: 3'-tRNA processing endoribonuclease activity1.87E-03
45GO:0005034: osmosensor activity1.87E-03
46GO:0008469: histone-arginine N-methyltransferase activity1.87E-03
47GO:0070330: aromatase activity1.87E-03
48GO:0017150: tRNA dihydrouridine synthase activity1.87E-03
49GO:0045548: phenylalanine ammonia-lyase activity1.87E-03
50GO:0016301: kinase activity2.18E-03
51GO:0016798: hydrolase activity, acting on glycosyl bonds2.22E-03
52GO:0035197: siRNA binding2.70E-03
53GO:0008508: bile acid:sodium symporter activity2.70E-03
54GO:0001872: (1->3)-beta-D-glucan binding2.70E-03
55GO:0019843: rRNA binding3.26E-03
56GO:0001053: plastid sigma factor activity3.64E-03
57GO:0004845: uracil phosphoribosyltransferase activity3.64E-03
58GO:0004737: pyruvate decarboxylase activity3.64E-03
59GO:0004345: glucose-6-phosphate dehydrogenase activity3.64E-03
60GO:0016836: hydro-lyase activity3.64E-03
61GO:0016987: sigma factor activity3.64E-03
62GO:0005253: anion channel activity3.64E-03
63GO:0051539: 4 iron, 4 sulfur cluster binding4.06E-03
64GO:0008725: DNA-3-methyladenine glycosylase activity4.67E-03
65GO:0004372: glycine hydroxymethyltransferase activity4.67E-03
66GO:0018685: alkane 1-monooxygenase activity4.67E-03
67GO:0004812: aminoacyl-tRNA ligase activity5.64E-03
68GO:0008519: ammonium transmembrane transporter activity5.79E-03
69GO:0005247: voltage-gated chloride channel activity5.79E-03
70GO:0030976: thiamine pyrophosphate binding5.79E-03
71GO:2001070: starch binding5.79E-03
72GO:0004605: phosphatidate cytidylyltransferase activity5.79E-03
73GO:1990714: hydroxyproline O-galactosyltransferase activity5.79E-03
74GO:0019900: kinase binding6.99E-03
75GO:0008195: phosphatidate phosphatase activity6.99E-03
76GO:0004849: uridine kinase activity6.99E-03
77GO:0003723: RNA binding7.46E-03
78GO:0019901: protein kinase binding7.59E-03
79GO:0003872: 6-phosphofructokinase activity8.28E-03
80GO:0051015: actin filament binding9.27E-03
81GO:0004650: polygalacturonase activity9.74E-03
82GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity1.11E-02
83GO:0005375: copper ion transmembrane transporter activity1.11E-02
84GO:0008353: RNA polymerase II carboxy-terminal domain kinase activity1.11E-02
85GO:0008889: glycerophosphodiester phosphodiesterase activity1.26E-02
86GO:0004673: protein histidine kinase activity1.58E-02
87GO:0004713: protein tyrosine kinase activity1.58E-02
88GO:0016829: lyase activity1.61E-02
89GO:0004252: serine-type endopeptidase activity1.67E-02
90GO:0008559: xenobiotic-transporting ATPase activity1.75E-02
91GO:0016614: oxidoreductase activity, acting on CH-OH group of donors1.79E-02
92GO:0004521: endoribonuclease activity1.93E-02
93GO:0042803: protein homodimerization activity2.02E-02
94GO:0004871: signal transducer activity2.02E-02
95GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism2.12E-02
96GO:0031072: heat shock protein binding2.12E-02
97GO:0000155: phosphorelay sensor kinase activity2.12E-02
98GO:0005262: calcium channel activity2.12E-02
99GO:0009982: pseudouridine synthase activity2.12E-02
100GO:0004022: alcohol dehydrogenase (NAD) activity2.12E-02
101GO:0042973: glucan endo-1,3-beta-D-glucosidase activity2.31E-02
102GO:0004185: serine-type carboxypeptidase activity2.54E-02
103GO:0043424: protein histidine kinase binding3.12E-02
104GO:0015079: potassium ion transmembrane transporter activity3.12E-02
105GO:0005345: purine nucleobase transmembrane transporter activity3.12E-02
106GO:0005215: transporter activity3.26E-02
107GO:0008408: 3'-5' exonuclease activity3.34E-02
108GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds3.34E-02
109GO:0003690: double-stranded DNA binding3.54E-02
110GO:0003777: microtubule motor activity3.78E-02
111GO:0008514: organic anion transmembrane transporter activity4.02E-02
112GO:0050660: flavin adenine dinucleotide binding4.52E-02
113GO:0004527: exonuclease activity4.75E-02
114GO:0008536: Ran GTPase binding4.75E-02
115GO:0010181: FMN binding4.99E-02
116GO:0050662: coenzyme binding4.99E-02
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Gene type



Gene DE type