GO Enrichment Analysis of Co-expressed Genes with
AT5G13950
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042794: rRNA transcription from plastid promoter | 0.00E+00 |
| 2 | GO:0044154: histone H3-K14 acetylation | 0.00E+00 |
| 3 | GO:0046719: regulation by virus of viral protein levels in host cell | 0.00E+00 |
| 4 | GO:0045014: negative regulation of transcription by glucose | 0.00E+00 |
| 5 | GO:0033473: indoleacetic acid conjugate metabolic process | 0.00E+00 |
| 6 | GO:1901698: response to nitrogen compound | 0.00E+00 |
| 7 | GO:0035884: arabinan biosynthetic process | 0.00E+00 |
| 8 | GO:0009606: tropism | 0.00E+00 |
| 9 | GO:0070455: positive regulation of heme biosynthetic process | 0.00E+00 |
| 10 | GO:0090322: regulation of superoxide metabolic process | 0.00E+00 |
| 11 | GO:0000372: Group I intron splicing | 0.00E+00 |
| 12 | GO:0043972: histone H3-K23 acetylation | 0.00E+00 |
| 13 | GO:0010480: microsporocyte differentiation | 0.00E+00 |
| 14 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.70E-05 |
| 15 | GO:0048229: gametophyte development | 2.77E-05 |
| 16 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 1.56E-04 |
| 17 | GO:0006468: protein phosphorylation | 1.96E-04 |
| 18 | GO:0006955: immune response | 2.04E-04 |
| 19 | GO:0048437: floral organ development | 2.04E-04 |
| 20 | GO:0042255: ribosome assembly | 2.58E-04 |
| 21 | GO:0006353: DNA-templated transcription, termination | 2.58E-04 |
| 22 | GO:0051013: microtubule severing | 2.70E-04 |
| 23 | GO:0034757: negative regulation of iron ion transport | 2.70E-04 |
| 24 | GO:0034970: histone H3-R2 methylation | 2.70E-04 |
| 25 | GO:0034972: histone H3-R26 methylation | 2.70E-04 |
| 26 | GO:0080112: seed growth | 2.70E-04 |
| 27 | GO:1905039: carboxylic acid transmembrane transport | 2.70E-04 |
| 28 | GO:0043971: histone H3-K18 acetylation | 2.70E-04 |
| 29 | GO:1905200: gibberellic acid transmembrane transport | 2.70E-04 |
| 30 | GO:1903866: palisade mesophyll development | 2.70E-04 |
| 31 | GO:0090063: positive regulation of microtubule nucleation | 2.70E-04 |
| 32 | GO:0034971: histone H3-R17 methylation | 2.70E-04 |
| 33 | GO:0033206: meiotic cytokinesis | 2.70E-04 |
| 34 | GO:0007389: pattern specification process | 3.19E-04 |
| 35 | GO:0000373: Group II intron splicing | 3.84E-04 |
| 36 | GO:0009658: chloroplast organization | 4.56E-04 |
| 37 | GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine | 5.94E-04 |
| 38 | GO:0010254: nectary development | 5.94E-04 |
| 39 | GO:0033566: gamma-tubulin complex localization | 5.94E-04 |
| 40 | GO:0009967: positive regulation of signal transduction | 5.94E-04 |
| 41 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 5.94E-04 |
| 42 | GO:1902884: positive regulation of response to oxidative stress | 5.94E-04 |
| 43 | GO:0010569: regulation of double-strand break repair via homologous recombination | 5.94E-04 |
| 44 | GO:0010434: bract formation | 5.94E-04 |
| 45 | GO:0010271: regulation of chlorophyll catabolic process | 5.94E-04 |
| 46 | GO:0048439: flower morphogenesis | 5.94E-04 |
| 47 | GO:1904143: positive regulation of carotenoid biosynthetic process | 5.94E-04 |
| 48 | GO:0080009: mRNA methylation | 5.94E-04 |
| 49 | GO:0010075: regulation of meristem growth | 7.96E-04 |
| 50 | GO:0009934: regulation of meristem structural organization | 8.95E-04 |
| 51 | GO:0009416: response to light stimulus | 9.47E-04 |
| 52 | GO:0030029: actin filament-based process | 9.62E-04 |
| 53 | GO:0009954: proximal/distal pattern formation | 9.62E-04 |
| 54 | GO:0010476: gibberellin mediated signaling pathway | 9.62E-04 |
| 55 | GO:0080117: secondary growth | 9.62E-04 |
| 56 | GO:0090391: granum assembly | 9.62E-04 |
| 57 | GO:0071705: nitrogen compound transport | 9.62E-04 |
| 58 | GO:0001578: microtubule bundle formation | 9.62E-04 |
| 59 | GO:0080188: RNA-directed DNA methylation | 9.99E-04 |
| 60 | GO:0010371: regulation of gibberellin biosynthetic process | 1.38E-03 |
| 61 | GO:1902476: chloride transmembrane transport | 1.38E-03 |
| 62 | GO:0010239: chloroplast mRNA processing | 1.38E-03 |
| 63 | GO:0009800: cinnamic acid biosynthetic process | 1.38E-03 |
| 64 | GO:0033014: tetrapyrrole biosynthetic process | 1.38E-03 |
| 65 | GO:0046739: transport of virus in multicellular host | 1.38E-03 |
| 66 | GO:1902290: positive regulation of defense response to oomycetes | 1.38E-03 |
| 67 | GO:0016998: cell wall macromolecule catabolic process | 1.48E-03 |
| 68 | GO:0008380: RNA splicing | 1.50E-03 |
| 69 | GO:0071215: cellular response to abscisic acid stimulus | 1.76E-03 |
| 70 | GO:0006479: protein methylation | 1.84E-03 |
| 71 | GO:0051322: anaphase | 1.84E-03 |
| 72 | GO:0071249: cellular response to nitrate | 1.84E-03 |
| 73 | GO:2000038: regulation of stomatal complex development | 1.84E-03 |
| 74 | GO:0048653: anther development | 2.24E-03 |
| 75 | GO:0000226: microtubule cytoskeleton organization | 2.24E-03 |
| 76 | GO:0048578: positive regulation of long-day photoperiodism, flowering | 2.35E-03 |
| 77 | GO:0032876: negative regulation of DNA endoreduplication | 2.35E-03 |
| 78 | GO:0030308: negative regulation of cell growth | 2.35E-03 |
| 79 | GO:0006544: glycine metabolic process | 2.35E-03 |
| 80 | GO:0048497: maintenance of floral organ identity | 2.35E-03 |
| 81 | GO:0009734: auxin-activated signaling pathway | 2.41E-03 |
| 82 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 2.90E-03 |
| 83 | GO:0016554: cytidine to uridine editing | 2.90E-03 |
| 84 | GO:0009913: epidermal cell differentiation | 2.90E-03 |
| 85 | GO:0042176: regulation of protein catabolic process | 2.90E-03 |
| 86 | GO:0010315: auxin efflux | 2.90E-03 |
| 87 | GO:0042793: transcription from plastid promoter | 2.90E-03 |
| 88 | GO:0048831: regulation of shoot system development | 2.90E-03 |
| 89 | GO:0006559: L-phenylalanine catabolic process | 2.90E-03 |
| 90 | GO:0009643: photosynthetic acclimation | 2.90E-03 |
| 91 | GO:0006563: L-serine metabolic process | 2.90E-03 |
| 92 | GO:0032502: developmental process | 3.18E-03 |
| 93 | GO:0010090: trichome morphogenesis | 3.39E-03 |
| 94 | GO:2000037: regulation of stomatal complex patterning | 3.49E-03 |
| 95 | GO:0010310: regulation of hydrogen peroxide metabolic process | 3.49E-03 |
| 96 | GO:0009955: adaxial/abaxial pattern specification | 3.49E-03 |
| 97 | GO:0000911: cytokinesis by cell plate formation | 3.49E-03 |
| 98 | GO:0010067: procambium histogenesis | 3.49E-03 |
| 99 | GO:2000033: regulation of seed dormancy process | 3.49E-03 |
| 100 | GO:1901259: chloroplast rRNA processing | 3.49E-03 |
| 101 | GO:0048509: regulation of meristem development | 3.49E-03 |
| 102 | GO:0010252: auxin homeostasis | 3.61E-03 |
| 103 | GO:0006355: regulation of transcription, DNA-templated | 4.00E-03 |
| 104 | GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway | 4.12E-03 |
| 105 | GO:0006821: chloride transport | 4.12E-03 |
| 106 | GO:0010103: stomatal complex morphogenesis | 4.12E-03 |
| 107 | GO:0006351: transcription, DNA-templated | 4.24E-03 |
| 108 | GO:0009845: seed germination | 4.46E-03 |
| 109 | GO:0010029: regulation of seed germination | 4.55E-03 |
| 110 | GO:0052543: callose deposition in cell wall | 4.77E-03 |
| 111 | GO:0009938: negative regulation of gibberellic acid mediated signaling pathway | 4.77E-03 |
| 112 | GO:0001522: pseudouridine synthesis | 4.77E-03 |
| 113 | GO:0009642: response to light intensity | 4.77E-03 |
| 114 | GO:0030162: regulation of proteolysis | 4.77E-03 |
| 115 | GO:0048766: root hair initiation | 4.77E-03 |
| 116 | GO:0009733: response to auxin | 4.79E-03 |
| 117 | GO:0010497: plasmodesmata-mediated intercellular transport | 5.47E-03 |
| 118 | GO:0044030: regulation of DNA methylation | 5.47E-03 |
| 119 | GO:0009832: plant-type cell wall biogenesis | 5.89E-03 |
| 120 | GO:0098656: anion transmembrane transport | 6.20E-03 |
| 121 | GO:0006783: heme biosynthetic process | 6.20E-03 |
| 122 | GO:0048589: developmental growth | 6.20E-03 |
| 123 | GO:1900426: positive regulation of defense response to bacterium | 6.96E-03 |
| 124 | GO:0035999: tetrahydrofolate interconversion | 6.96E-03 |
| 125 | GO:0042761: very long-chain fatty acid biosynthetic process | 6.96E-03 |
| 126 | GO:0006349: regulation of gene expression by genetic imprinting | 6.96E-03 |
| 127 | GO:1900865: chloroplast RNA modification | 6.96E-03 |
| 128 | GO:0016571: histone methylation | 6.96E-03 |
| 129 | GO:0016573: histone acetylation | 6.96E-03 |
| 130 | GO:0031627: telomeric loop formation | 7.75E-03 |
| 131 | GO:0010048: vernalization response | 7.75E-03 |
| 132 | GO:0006535: cysteine biosynthetic process from serine | 7.75E-03 |
| 133 | GO:0009089: lysine biosynthetic process via diaminopimelate | 8.58E-03 |
| 134 | GO:0015770: sucrose transport | 8.58E-03 |
| 135 | GO:0009926: auxin polar transport | 9.18E-03 |
| 136 | GO:0008283: cell proliferation | 9.18E-03 |
| 137 | GO:0008361: regulation of cell size | 9.44E-03 |
| 138 | GO:0015706: nitrate transport | 9.44E-03 |
| 139 | GO:0010152: pollen maturation | 9.44E-03 |
| 140 | GO:0010582: floral meristem determinacy | 9.44E-03 |
| 141 | GO:0009767: photosynthetic electron transport chain | 1.03E-02 |
| 142 | GO:0010102: lateral root morphogenesis | 1.03E-02 |
| 143 | GO:0009266: response to temperature stimulus | 1.12E-02 |
| 144 | GO:0010020: chloroplast fission | 1.12E-02 |
| 145 | GO:0010223: secondary shoot formation | 1.12E-02 |
| 146 | GO:0009825: multidimensional cell growth | 1.22E-02 |
| 147 | GO:0010167: response to nitrate | 1.22E-02 |
| 148 | GO:0009901: anther dehiscence | 1.22E-02 |
| 149 | GO:0006071: glycerol metabolic process | 1.32E-02 |
| 150 | GO:0009909: regulation of flower development | 1.37E-02 |
| 151 | GO:0019344: cysteine biosynthetic process | 1.42E-02 |
| 152 | GO:0009944: polarity specification of adaxial/abaxial axis | 1.42E-02 |
| 153 | GO:0009863: salicylic acid mediated signaling pathway | 1.42E-02 |
| 154 | GO:0006338: chromatin remodeling | 1.42E-02 |
| 155 | GO:0010187: negative regulation of seed germination | 1.42E-02 |
| 156 | GO:2000377: regulation of reactive oxygen species metabolic process | 1.42E-02 |
| 157 | GO:0048367: shoot system development | 1.52E-02 |
| 158 | GO:0043622: cortical microtubule organization | 1.52E-02 |
| 159 | GO:0010431: seed maturation | 1.62E-02 |
| 160 | GO:0016569: covalent chromatin modification | 1.67E-02 |
| 161 | GO:0045892: negative regulation of transcription, DNA-templated | 1.79E-02 |
| 162 | GO:0010227: floral organ abscission | 1.84E-02 |
| 163 | GO:0010082: regulation of root meristem growth | 1.84E-02 |
| 164 | GO:0001944: vasculature development | 1.84E-02 |
| 165 | GO:0010089: xylem development | 1.95E-02 |
| 166 | GO:0048443: stamen development | 1.95E-02 |
| 167 | GO:0010091: trichome branching | 1.95E-02 |
| 168 | GO:0006284: base-excision repair | 1.95E-02 |
| 169 | GO:0070417: cellular response to cold | 2.07E-02 |
| 170 | GO:0042631: cellular response to water deprivation | 2.19E-02 |
| 171 | GO:0010501: RNA secondary structure unwinding | 2.19E-02 |
| 172 | GO:0010087: phloem or xylem histogenesis | 2.19E-02 |
| 173 | GO:0009741: response to brassinosteroid | 2.31E-02 |
| 174 | GO:0009960: endosperm development | 2.31E-02 |
| 175 | GO:0009958: positive gravitropism | 2.31E-02 |
| 176 | GO:0048364: root development | 2.41E-02 |
| 177 | GO:0009646: response to absence of light | 2.43E-02 |
| 178 | GO:0048544: recognition of pollen | 2.43E-02 |
| 179 | GO:0007018: microtubule-based movement | 2.43E-02 |
| 180 | GO:0009791: post-embryonic development | 2.55E-02 |
| 181 | GO:0048825: cotyledon development | 2.55E-02 |
| 182 | GO:0009749: response to glucose | 2.55E-02 |
| 183 | GO:0080156: mitochondrial mRNA modification | 2.68E-02 |
| 184 | GO:0009630: gravitropism | 2.81E-02 |
| 185 | GO:0010583: response to cyclopentenone | 2.81E-02 |
| 186 | GO:0045490: pectin catabolic process | 3.06E-02 |
| 187 | GO:0009451: RNA modification | 3.13E-02 |
| 188 | GO:0010228: vegetative to reproductive phase transition of meristem | 3.20E-02 |
| 189 | GO:0071805: potassium ion transmembrane transport | 3.21E-02 |
| 190 | GO:0000910: cytokinesis | 3.34E-02 |
| 191 | GO:0009739: response to gibberellin | 3.42E-02 |
| 192 | GO:0001666: response to hypoxia | 3.48E-02 |
| 193 | GO:0010027: thylakoid membrane organization | 3.48E-02 |
| 194 | GO:0007166: cell surface receptor signaling pathway | 3.50E-02 |
| 195 | GO:0009617: response to bacterium | 3.65E-02 |
| 196 | GO:0015995: chlorophyll biosynthetic process | 3.91E-02 |
| 197 | GO:0048481: plant ovule development | 4.21E-02 |
| 198 | GO:0030154: cell differentiation | 4.30E-02 |
| 199 | GO:0048767: root hair elongation | 4.36E-02 |
| 200 | GO:0000160: phosphorelay signal transduction system | 4.36E-02 |
| 201 | GO:0010218: response to far red light | 4.51E-02 |
| 202 | GO:0009910: negative regulation of flower development | 4.66E-02 |
| 203 | GO:0009867: jasmonic acid mediated signaling pathway | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042834: peptidoglycan binding | 0.00E+00 |
| 2 | GO:0003727: single-stranded RNA binding | 7.90E-06 |
| 3 | GO:0004674: protein serine/threonine kinase activity | 9.86E-05 |
| 4 | GO:0016901: oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor | 2.70E-04 |
| 5 | GO:0004016: adenylate cyclase activity | 2.70E-04 |
| 6 | GO:1905201: gibberellin transmembrane transporter activity | 2.70E-04 |
| 7 | GO:0008836: diaminopimelate decarboxylase activity | 2.70E-04 |
| 8 | GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity | 2.70E-04 |
| 9 | GO:0008568: microtubule-severing ATPase activity | 2.70E-04 |
| 10 | GO:0016274: protein-arginine N-methyltransferase activity | 2.70E-04 |
| 11 | GO:0009672: auxin:proton symporter activity | 4.56E-04 |
| 12 | GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity | 5.94E-04 |
| 13 | GO:0005078: MAP-kinase scaffold activity | 5.94E-04 |
| 14 | GO:0009884: cytokinin receptor activity | 5.94E-04 |
| 15 | GO:0035241: protein-arginine omega-N monomethyltransferase activity | 5.94E-04 |
| 16 | GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity | 5.94E-04 |
| 17 | GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity | 5.94E-04 |
| 18 | GO:0005515: protein binding | 7.83E-04 |
| 19 | GO:0009982: pseudouridine synthase activity | 7.96E-04 |
| 20 | GO:0010329: auxin efflux transmembrane transporter activity | 7.96E-04 |
| 21 | GO:0008469: histone-arginine N-methyltransferase activity | 9.62E-04 |
| 22 | GO:0017150: tRNA dihydrouridine synthase activity | 9.62E-04 |
| 23 | GO:0045548: phenylalanine ammonia-lyase activity | 9.62E-04 |
| 24 | GO:0032947: protein complex scaffold | 9.62E-04 |
| 25 | GO:0070181: small ribosomal subunit rRNA binding | 9.62E-04 |
| 26 | GO:0032549: ribonucleoside binding | 9.62E-04 |
| 27 | GO:0047334: diphosphate-fructose-6-phosphate 1-phosphotransferase activity | 9.62E-04 |
| 28 | GO:0005034: osmosensor activity | 9.62E-04 |
| 29 | GO:0001872: (1->3)-beta-D-glucan binding | 1.38E-03 |
| 30 | GO:0033612: receptor serine/threonine kinase binding | 1.48E-03 |
| 31 | GO:0030570: pectate lyase activity | 1.76E-03 |
| 32 | GO:0010011: auxin binding | 1.84E-03 |
| 33 | GO:0010385: double-stranded methylated DNA binding | 1.84E-03 |
| 34 | GO:0043495: protein anchor | 1.84E-03 |
| 35 | GO:0005253: anion channel activity | 1.84E-03 |
| 36 | GO:0003777: microtubule motor activity | 2.20E-03 |
| 37 | GO:0008725: DNA-3-methyladenine glycosylase activity | 2.35E-03 |
| 38 | GO:0004372: glycine hydroxymethyltransferase activity | 2.35E-03 |
| 39 | GO:0019901: protein kinase binding | 2.79E-03 |
| 40 | GO:0005247: voltage-gated chloride channel activity | 2.90E-03 |
| 41 | GO:0080030: methyl indole-3-acetate esterase activity | 2.90E-03 |
| 42 | GO:0003723: RNA binding | 3.33E-03 |
| 43 | GO:0004124: cysteine synthase activity | 3.49E-03 |
| 44 | GO:0019900: kinase binding | 3.49E-03 |
| 45 | GO:0019843: rRNA binding | 4.04E-03 |
| 46 | GO:0004871: signal transducer activity | 4.38E-03 |
| 47 | GO:0008353: RNA polymerase II carboxy-terminal domain kinase activity | 5.47E-03 |
| 48 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 6.19E-03 |
| 49 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 6.20E-03 |
| 50 | GO:0000989: transcription factor activity, transcription factor binding | 6.20E-03 |
| 51 | GO:0008017: microtubule binding | 6.44E-03 |
| 52 | GO:0004673: protein histidine kinase activity | 7.75E-03 |
| 53 | GO:0004672: protein kinase activity | 8.10E-03 |
| 54 | GO:0003691: double-stranded telomeric DNA binding | 8.58E-03 |
| 55 | GO:0008515: sucrose transmembrane transporter activity | 8.58E-03 |
| 56 | GO:0001054: RNA polymerase I activity | 8.58E-03 |
| 57 | GO:0008168: methyltransferase activity | 1.01E-02 |
| 58 | GO:0031072: heat shock protein binding | 1.03E-02 |
| 59 | GO:0000155: phosphorelay sensor kinase activity | 1.03E-02 |
| 60 | GO:0004022: alcohol dehydrogenase (NAD) activity | 1.03E-02 |
| 61 | GO:0005315: inorganic phosphate transmembrane transporter activity | 1.03E-02 |
| 62 | GO:0051119: sugar transmembrane transporter activity | 1.22E-02 |
| 63 | GO:0003690: double-stranded DNA binding | 1.28E-02 |
| 64 | GO:0031625: ubiquitin protein ligase binding | 1.37E-02 |
| 65 | GO:0005215: transporter activity | 1.47E-02 |
| 66 | GO:0043424: protein histidine kinase binding | 1.52E-02 |
| 67 | GO:0005345: purine nucleobase transmembrane transporter activity | 1.52E-02 |
| 68 | GO:0015079: potassium ion transmembrane transporter activity | 1.52E-02 |
| 69 | GO:0004650: polygalacturonase activity | 1.62E-02 |
| 70 | GO:0004176: ATP-dependent peptidase activity | 1.62E-02 |
| 71 | GO:0008514: organic anion transmembrane transporter activity | 1.95E-02 |
| 72 | GO:0018024: histone-lysine N-methyltransferase activity | 2.07E-02 |
| 73 | GO:0005524: ATP binding | 2.10E-02 |
| 74 | GO:0004402: histone acetyltransferase activity | 2.19E-02 |
| 75 | GO:0003713: transcription coactivator activity | 2.31E-02 |
| 76 | GO:0001085: RNA polymerase II transcription factor binding | 2.31E-02 |
| 77 | GO:0016829: lyase activity | 2.40E-02 |
| 78 | GO:0010181: FMN binding | 2.43E-02 |
| 79 | GO:0030170: pyridoxal phosphate binding | 2.46E-02 |
| 80 | GO:0004519: endonuclease activity | 2.54E-02 |
| 81 | GO:0015144: carbohydrate transmembrane transporter activity | 2.66E-02 |
| 82 | GO:0048038: quinone binding | 2.68E-02 |
| 83 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 2.85E-02 |
| 84 | GO:0005351: sugar:proton symporter activity | 2.99E-02 |
| 85 | GO:0016759: cellulose synthase activity | 3.07E-02 |
| 86 | GO:0008237: metallopeptidase activity | 3.21E-02 |
| 87 | GO:0005200: structural constituent of cytoskeleton | 3.21E-02 |
| 88 | GO:0008375: acetylglucosaminyltransferase activity | 3.77E-02 |
| 89 | GO:0004004: ATP-dependent RNA helicase activity | 3.91E-02 |
| 90 | GO:0030247: polysaccharide binding | 3.91E-02 |
| 91 | GO:0003677: DNA binding | 3.98E-02 |
| 92 | GO:0004222: metalloendopeptidase activity | 4.51E-02 |
| 93 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 4.66E-02 |
| 94 | GO:0016788: hydrolase activity, acting on ester bonds | 4.80E-02 |
| 95 | GO:0003697: single-stranded DNA binding | 4.97E-02 |