GO Enrichment Analysis of Co-expressed Genes with
AT5G13650
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000489: maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | 0.00E+00 |
| 2 | GO:0007638: mechanosensory behavior | 0.00E+00 |
| 3 | GO:0000455: enzyme-directed rRNA pseudouridine synthesis | 0.00E+00 |
| 4 | GO:0019379: sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin) | 0.00E+00 |
| 5 | GO:0000488: maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | 0.00E+00 |
| 6 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 7 | GO:0015843: methylammonium transport | 0.00E+00 |
| 8 | GO:0010422: regulation of brassinosteroid biosynthetic process | 0.00E+00 |
| 9 | GO:0018131: oxazole or thiazole biosynthetic process | 0.00E+00 |
| 10 | GO:0009157: deoxyribonucleoside monophosphate biosynthetic process | 0.00E+00 |
| 11 | GO:0070509: calcium ion import | 2.32E-04 |
| 12 | GO:0010480: microsporocyte differentiation | 2.32E-04 |
| 13 | GO:0006427: histidyl-tRNA aminoacylation | 2.32E-04 |
| 14 | GO:0009638: phototropism | 3.67E-04 |
| 15 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 4.79E-04 |
| 16 | GO:0010569: regulation of double-strand break repair via homologous recombination | 5.15E-04 |
| 17 | GO:0031537: regulation of anthocyanin metabolic process | 5.15E-04 |
| 18 | GO:0042325: regulation of phosphorylation | 5.15E-04 |
| 19 | GO:0009786: regulation of asymmetric cell division | 5.15E-04 |
| 20 | GO:0042550: photosystem I stabilization | 5.15E-04 |
| 21 | GO:0060359: response to ammonium ion | 5.15E-04 |
| 22 | GO:0000160: phosphorelay signal transduction system | 5.83E-04 |
| 23 | GO:0070588: calcium ion transmembrane transport | 8.11E-04 |
| 24 | GO:0001578: microtubule bundle formation | 8.37E-04 |
| 25 | GO:0043157: response to cation stress | 8.37E-04 |
| 26 | GO:0019419: sulfate reduction | 8.37E-04 |
| 27 | GO:0019344: cysteine biosynthetic process | 9.95E-04 |
| 28 | GO:0031048: chromatin silencing by small RNA | 1.19E-03 |
| 29 | GO:0015696: ammonium transport | 1.19E-03 |
| 30 | GO:0046739: transport of virus in multicellular host | 1.19E-03 |
| 31 | GO:2000904: regulation of starch metabolic process | 1.19E-03 |
| 32 | GO:2001141: regulation of RNA biosynthetic process | 1.19E-03 |
| 33 | GO:0007231: osmosensory signaling pathway | 1.19E-03 |
| 34 | GO:0051639: actin filament network formation | 1.19E-03 |
| 35 | GO:0044211: CTP salvage | 1.19E-03 |
| 36 | GO:0019048: modulation by virus of host morphology or physiology | 1.19E-03 |
| 37 | GO:0006306: DNA methylation | 1.20E-03 |
| 38 | GO:0010082: regulation of root meristem growth | 1.42E-03 |
| 39 | GO:0009736: cytokinin-activated signaling pathway | 1.47E-03 |
| 40 | GO:0006552: leucine catabolic process | 1.59E-03 |
| 41 | GO:0051567: histone H3-K9 methylation | 1.59E-03 |
| 42 | GO:0033500: carbohydrate homeostasis | 1.59E-03 |
| 43 | GO:0044206: UMP salvage | 1.59E-03 |
| 44 | GO:0046656: folic acid biosynthetic process | 1.59E-03 |
| 45 | GO:0009165: nucleotide biosynthetic process | 1.59E-03 |
| 46 | GO:0051764: actin crosslink formation | 1.59E-03 |
| 47 | GO:0051322: anaphase | 1.59E-03 |
| 48 | GO:0072488: ammonium transmembrane transport | 1.59E-03 |
| 49 | GO:0006468: protein phosphorylation | 1.67E-03 |
| 50 | GO:0006342: chromatin silencing | 1.95E-03 |
| 51 | GO:0016131: brassinosteroid metabolic process | 2.03E-03 |
| 52 | GO:0071368: cellular response to cytokinin stimulus | 2.03E-03 |
| 53 | GO:1902183: regulation of shoot apical meristem development | 2.03E-03 |
| 54 | GO:0009646: response to absence of light | 2.09E-03 |
| 55 | GO:0006655: phosphatidylglycerol biosynthetic process | 2.50E-03 |
| 56 | GO:0006206: pyrimidine nucleobase metabolic process | 2.50E-03 |
| 57 | GO:0006139: nucleobase-containing compound metabolic process | 2.50E-03 |
| 58 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 2.50E-03 |
| 59 | GO:0009228: thiamine biosynthetic process | 2.50E-03 |
| 60 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 2.50E-03 |
| 61 | GO:0016458: gene silencing | 2.50E-03 |
| 62 | GO:0010405: arabinogalactan protein metabolic process | 2.50E-03 |
| 63 | GO:0009959: negative gravitropism | 2.50E-03 |
| 64 | GO:0042026: protein refolding | 3.00E-03 |
| 65 | GO:0006458: 'de novo' protein folding | 3.00E-03 |
| 66 | GO:0046654: tetrahydrofolate biosynthetic process | 3.00E-03 |
| 67 | GO:0030488: tRNA methylation | 3.00E-03 |
| 68 | GO:0080113: regulation of seed growth | 3.00E-03 |
| 69 | GO:0080036: regulation of cytokinin-activated signaling pathway | 3.00E-03 |
| 70 | GO:0051607: defense response to virus | 3.26E-03 |
| 71 | GO:0010027: thylakoid membrane organization | 3.46E-03 |
| 72 | GO:0009396: folic acid-containing compound biosynthetic process | 3.54E-03 |
| 73 | GO:0010444: guard mother cell differentiation | 3.54E-03 |
| 74 | GO:0022904: respiratory electron transport chain | 3.54E-03 |
| 75 | GO:0015693: magnesium ion transport | 3.54E-03 |
| 76 | GO:0009610: response to symbiotic fungus | 3.54E-03 |
| 77 | GO:0006955: immune response | 3.54E-03 |
| 78 | GO:0048528: post-embryonic root development | 3.54E-03 |
| 79 | GO:0048437: floral organ development | 3.54E-03 |
| 80 | GO:0010411: xyloglucan metabolic process | 4.07E-03 |
| 81 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 4.10E-03 |
| 82 | GO:0006402: mRNA catabolic process | 4.10E-03 |
| 83 | GO:0019375: galactolipid biosynthetic process | 4.10E-03 |
| 84 | GO:0048564: photosystem I assembly | 4.10E-03 |
| 85 | GO:0010497: plasmodesmata-mediated intercellular transport | 4.70E-03 |
| 86 | GO:0010052: guard cell differentiation | 4.70E-03 |
| 87 | GO:0032544: plastid translation | 4.70E-03 |
| 88 | GO:0006002: fructose 6-phosphate metabolic process | 4.70E-03 |
| 89 | GO:0071482: cellular response to light stimulus | 4.70E-03 |
| 90 | GO:0009827: plant-type cell wall modification | 4.70E-03 |
| 91 | GO:0016310: phosphorylation | 4.94E-03 |
| 92 | GO:2000024: regulation of leaf development | 5.32E-03 |
| 93 | GO:0009051: pentose-phosphate shunt, oxidative branch | 5.32E-03 |
| 94 | GO:0007166: cell surface receptor signaling pathway | 5.45E-03 |
| 95 | GO:0010380: regulation of chlorophyll biosynthetic process | 5.97E-03 |
| 96 | GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway | 5.97E-03 |
| 97 | GO:0006535: cysteine biosynthetic process from serine | 6.65E-03 |
| 98 | GO:0000103: sulfate assimilation | 6.65E-03 |
| 99 | GO:0030422: production of siRNA involved in RNA interference | 6.65E-03 |
| 100 | GO:0048829: root cap development | 6.65E-03 |
| 101 | GO:0045036: protein targeting to chloroplast | 6.65E-03 |
| 102 | GO:0006949: syncytium formation | 6.65E-03 |
| 103 | GO:0009089: lysine biosynthetic process via diaminopimelate | 7.35E-03 |
| 104 | GO:0006352: DNA-templated transcription, initiation | 7.35E-03 |
| 105 | GO:0048229: gametophyte development | 7.35E-03 |
| 106 | GO:0006816: calcium ion transport | 7.35E-03 |
| 107 | GO:0010114: response to red light | 7.36E-03 |
| 108 | GO:0042546: cell wall biogenesis | 7.65E-03 |
| 109 | GO:0009658: chloroplast organization | 8.01E-03 |
| 110 | GO:0016024: CDP-diacylglycerol biosynthetic process | 8.08E-03 |
| 111 | GO:0045037: protein import into chloroplast stroma | 8.08E-03 |
| 112 | GO:0009735: response to cytokinin | 8.37E-03 |
| 113 | GO:0009785: blue light signaling pathway | 8.84E-03 |
| 114 | GO:0006006: glucose metabolic process | 8.84E-03 |
| 115 | GO:0050826: response to freezing | 8.84E-03 |
| 116 | GO:0010075: regulation of meristem growth | 8.84E-03 |
| 117 | GO:2000012: regulation of auxin polar transport | 8.84E-03 |
| 118 | GO:0010207: photosystem II assembly | 9.62E-03 |
| 119 | GO:0009934: regulation of meristem structural organization | 9.62E-03 |
| 120 | GO:0090351: seedling development | 1.04E-02 |
| 121 | GO:0006096: glycolytic process | 1.18E-02 |
| 122 | GO:0009944: polarity specification of adaxial/abaxial axis | 1.21E-02 |
| 123 | GO:0051017: actin filament bundle assembly | 1.21E-02 |
| 124 | GO:0005992: trehalose biosynthetic process | 1.21E-02 |
| 125 | GO:0048367: shoot system development | 1.21E-02 |
| 126 | GO:0031408: oxylipin biosynthetic process | 1.39E-02 |
| 127 | GO:0016998: cell wall macromolecule catabolic process | 1.39E-02 |
| 128 | GO:0061077: chaperone-mediated protein folding | 1.39E-02 |
| 129 | GO:0006730: one-carbon metabolic process | 1.48E-02 |
| 130 | GO:0007005: mitochondrion organization | 1.48E-02 |
| 131 | GO:0006810: transport | 1.64E-02 |
| 132 | GO:0048364: root development | 1.82E-02 |
| 133 | GO:0080022: primary root development | 1.87E-02 |
| 134 | GO:0048653: anther development | 1.87E-02 |
| 135 | GO:0000226: microtubule cytoskeleton organization | 1.87E-02 |
| 136 | GO:0009790: embryo development | 2.08E-02 |
| 137 | GO:0008654: phospholipid biosynthetic process | 2.18E-02 |
| 138 | GO:0009851: auxin biosynthetic process | 2.18E-02 |
| 139 | GO:0016132: brassinosteroid biosynthetic process | 2.29E-02 |
| 140 | GO:0031047: gene silencing by RNA | 2.40E-02 |
| 141 | GO:0009630: gravitropism | 2.40E-02 |
| 142 | GO:0009828: plant-type cell wall loosening | 2.62E-02 |
| 143 | GO:0000910: cytokinesis | 2.86E-02 |
| 144 | GO:0009816: defense response to bacterium, incompatible interaction | 3.10E-02 |
| 145 | GO:0006974: cellular response to DNA damage stimulus | 3.22E-02 |
| 146 | GO:0009416: response to light stimulus | 3.54E-02 |
| 147 | GO:0010311: lateral root formation | 3.72E-02 |
| 148 | GO:0009813: flavonoid biosynthetic process | 3.72E-02 |
| 149 | GO:0010119: regulation of stomatal movement | 3.98E-02 |
| 150 | GO:0006865: amino acid transport | 4.12E-02 |
| 151 | GO:0009867: jasmonic acid mediated signaling pathway | 4.25E-02 |
| 152 | GO:0009637: response to blue light | 4.25E-02 |
| 153 | GO:0006839: mitochondrial transport | 4.67E-02 |
| 154 | GO:0080167: response to karrikin | 4.69E-02 |
| 155 | GO:0006897: endocytosis | 4.81E-02 |
| 156 | GO:0006631: fatty acid metabolic process | 4.81E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004174: electron-transferring-flavoprotein dehydrogenase activity | 0.00E+00 |
| 2 | GO:0033818: beta-ketoacyl-acyl-carrier-protein synthase III activity | 0.00E+00 |
| 3 | GO:0048039: ubiquinone binding | 0.00E+00 |
| 4 | GO:0004056: argininosuccinate lyase activity | 0.00E+00 |
| 5 | GO:0043783: oxidoreductase activity, oxidizing metal ions with flavin as acceptor | 0.00E+00 |
| 6 | GO:0019136: deoxynucleoside kinase activity | 0.00E+00 |
| 7 | GO:0004156: dihydropteroate synthase activity | 2.32E-04 |
| 8 | GO:0003848: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity | 2.32E-04 |
| 9 | GO:0004821: histidine-tRNA ligase activity | 2.32E-04 |
| 10 | GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity | 2.32E-04 |
| 11 | GO:0046481: digalactosyldiacylglycerol synthase activity | 2.32E-04 |
| 12 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 2.32E-04 |
| 13 | GO:0010285: L,L-diaminopimelate aminotransferase activity | 2.32E-04 |
| 14 | GO:0050139: nicotinate-N-glucosyltransferase activity | 2.32E-04 |
| 15 | GO:0046480: galactolipid galactosyltransferase activity | 2.32E-04 |
| 16 | GO:0005227: calcium activated cation channel activity | 2.32E-04 |
| 17 | GO:0042834: peptidoglycan binding | 2.32E-04 |
| 18 | GO:0000156: phosphorelay response regulator activity | 2.83E-04 |
| 19 | GO:0004674: protein serine/threonine kinase activity | 4.38E-04 |
| 20 | GO:0009973: adenylyl-sulfate reductase activity | 5.15E-04 |
| 21 | GO:0004604: phosphoadenylyl-sulfate reductase (thioredoxin) activity | 5.15E-04 |
| 22 | GO:0050017: L-3-cyanoalanine synthase activity | 5.15E-04 |
| 23 | GO:0033741: adenylyl-sulfate reductase (glutathione) activity | 5.15E-04 |
| 24 | GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity | 5.15E-04 |
| 25 | GO:0016301: kinase activity | 6.14E-04 |
| 26 | GO:0005262: calcium channel activity | 6.45E-04 |
| 27 | GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity | 8.37E-04 |
| 28 | GO:0070180: large ribosomal subunit rRNA binding | 8.37E-04 |
| 29 | GO:0046524: sucrose-phosphate synthase activity | 8.37E-04 |
| 30 | GO:0070330: aromatase activity | 8.37E-04 |
| 31 | GO:0017150: tRNA dihydrouridine synthase activity | 8.37E-04 |
| 32 | GO:0035197: siRNA binding | 1.19E-03 |
| 33 | GO:0035250: UDP-galactosyltransferase activity | 1.19E-03 |
| 34 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 1.19E-03 |
| 35 | GO:0019199: transmembrane receptor protein kinase activity | 1.59E-03 |
| 36 | GO:0001053: plastid sigma factor activity | 1.59E-03 |
| 37 | GO:0004845: uracil phosphoribosyltransferase activity | 1.59E-03 |
| 38 | GO:0004345: glucose-6-phosphate dehydrogenase activity | 1.59E-03 |
| 39 | GO:0016987: sigma factor activity | 1.59E-03 |
| 40 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 2.03E-03 |
| 41 | GO:0005275: amine transmembrane transporter activity | 2.03E-03 |
| 42 | GO:0018685: alkane 1-monooxygenase activity | 2.03E-03 |
| 43 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 2.40E-03 |
| 44 | GO:0008519: ammonium transmembrane transporter activity | 2.50E-03 |
| 45 | GO:0004605: phosphatidate cytidylyltransferase activity | 2.50E-03 |
| 46 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 2.50E-03 |
| 47 | GO:0004849: uridine kinase activity | 3.00E-03 |
| 48 | GO:0004124: cysteine synthase activity | 3.00E-03 |
| 49 | GO:0008195: phosphatidate phosphatase activity | 3.00E-03 |
| 50 | GO:0042803: protein homodimerization activity | 3.13E-03 |
| 51 | GO:0003872: 6-phosphofructokinase activity | 3.54E-03 |
| 52 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 4.07E-03 |
| 53 | GO:0103075: indole-3-pyruvate monooxygenase activity | 4.10E-03 |
| 54 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 4.20E-03 |
| 55 | GO:0005524: ATP binding | 4.60E-03 |
| 56 | GO:0004672: protein kinase activity | 5.24E-03 |
| 57 | GO:0050661: NADP binding | 6.50E-03 |
| 58 | GO:0004713: protein tyrosine kinase activity | 6.65E-03 |
| 59 | GO:0004805: trehalose-phosphatase activity | 6.65E-03 |
| 60 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 7.35E-03 |
| 61 | GO:0044183: protein binding involved in protein folding | 7.35E-03 |
| 62 | GO:0004521: endoribonuclease activity | 8.08E-03 |
| 63 | GO:0004089: carbonate dehydratase activity | 8.84E-03 |
| 64 | GO:0015095: magnesium ion transmembrane transporter activity | 8.84E-03 |
| 65 | GO:0019888: protein phosphatase regulator activity | 8.84E-03 |
| 66 | GO:0009982: pseudouridine synthase activity | 8.84E-03 |
| 67 | GO:0050660: flavin adenine dinucleotide binding | 9.64E-03 |
| 68 | GO:0005345: purine nucleobase transmembrane transporter activity | 1.30E-02 |
| 69 | GO:0004176: ATP-dependent peptidase activity | 1.39E-02 |
| 70 | GO:0033612: receptor serine/threonine kinase binding | 1.39E-02 |
| 71 | GO:0004871: signal transducer activity | 1.40E-02 |
| 72 | GO:0004499: N,N-dimethylaniline monooxygenase activity | 1.67E-02 |
| 73 | GO:0008514: organic anion transmembrane transporter activity | 1.67E-02 |
| 74 | GO:0009055: electron carrier activity | 1.89E-02 |
| 75 | GO:0030170: pyridoxal phosphate binding | 1.97E-02 |
| 76 | GO:0050662: coenzyme binding | 2.07E-02 |
| 77 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 2.51E-02 |
| 78 | GO:0051015: actin filament binding | 2.51E-02 |
| 79 | GO:0008237: metallopeptidase activity | 2.74E-02 |
| 80 | GO:0008483: transaminase activity | 2.74E-02 |
| 81 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 2.74E-02 |
| 82 | GO:0016597: amino acid binding | 2.86E-02 |
| 83 | GO:0008236: serine-type peptidase activity | 3.47E-02 |
| 84 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 3.59E-02 |
| 85 | GO:0015238: drug transmembrane transporter activity | 3.72E-02 |
| 86 | GO:0004222: metalloendopeptidase activity | 3.85E-02 |
| 87 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 3.98E-02 |
| 88 | GO:0003993: acid phosphatase activity | 4.39E-02 |
| 89 | GO:0051539: 4 iron, 4 sulfur cluster binding | 4.67E-02 |
| 90 | GO:0003729: mRNA binding | 4.89E-02 |