Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G12150

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006982: response to lipid hydroperoxide0.00E+00
2GO:0010335: response to non-ionic osmotic stress0.00E+00
3GO:1902171: regulation of tocopherol cyclase activity0.00E+00
4GO:1901918: negative regulation of exoribonuclease activity0.00E+00
5GO:0090279: regulation of calcium ion import0.00E+00
6GO:0090470: shoot organ boundary specification0.00E+00
7GO:0046471: phosphatidylglycerol metabolic process0.00E+00
8GO:0071474: cellular hyperosmotic response0.00E+00
9GO:0052865: 1-deoxy-D-xylulose 5-phosphate biosynthetic process0.00E+00
10GO:0034337: RNA folding0.00E+00
11GO:0015995: chlorophyll biosynthetic process2.81E-11
12GO:0010207: photosystem II assembly1.32E-07
13GO:0055114: oxidation-reduction process2.54E-06
14GO:0015979: photosynthesis2.72E-05
15GO:2001141: regulation of RNA biosynthetic process6.19E-05
16GO:0009658: chloroplast organization6.41E-05
17GO:0009773: photosynthetic electron transport in photosystem I8.14E-05
18GO:0006094: gluconeogenesis1.22E-04
19GO:0042549: photosystem II stabilization2.39E-04
20GO:0010362: negative regulation of anion channel activity by blue light4.32E-04
21GO:0015969: guanosine tetraphosphate metabolic process4.32E-04
22GO:0046467: membrane lipid biosynthetic process4.32E-04
23GO:1902478: negative regulation of defense response to bacterium, incompatible interaction4.32E-04
24GO:0031426: polycistronic mRNA processing4.32E-04
25GO:1904966: positive regulation of vitamin E biosynthetic process4.32E-04
26GO:0043953: protein transport by the Tat complex4.32E-04
27GO:0010426: DNA methylation on cytosine within a CHH sequence4.32E-04
28GO:0000481: maturation of 5S rRNA4.32E-04
29GO:0015801: aromatic amino acid transport4.32E-04
30GO:1904964: positive regulation of phytol biosynthetic process4.32E-04
31GO:0071277: cellular response to calcium ion4.32E-04
32GO:0065002: intracellular protein transmembrane transport4.32E-04
33GO:0043686: co-translational protein modification4.32E-04
34GO:0071461: cellular response to redox state4.32E-04
35GO:0046167: glycerol-3-phosphate biosynthetic process4.32E-04
36GO:1902458: positive regulation of stomatal opening4.32E-04
37GO:0019722: calcium-mediated signaling4.36E-04
38GO:0006631: fatty acid metabolic process4.72E-04
39GO:0016559: peroxisome fission5.18E-04
40GO:0009704: de-etiolation5.18E-04
41GO:0006520: cellular amino acid metabolic process5.90E-04
42GO:0071482: cellular response to light stimulus6.32E-04
43GO:0019252: starch biosynthetic process7.07E-04
44GO:0030388: fructose 1,6-bisphosphate metabolic process9.33E-04
45GO:0051262: protein tetramerization9.33E-04
46GO:0035304: regulation of protein dephosphorylation9.33E-04
47GO:0042819: vitamin B6 biosynthetic process9.33E-04
48GO:0080005: photosystem stoichiometry adjustment9.33E-04
49GO:1902326: positive regulation of chlorophyll biosynthetic process9.33E-04
50GO:0010541: acropetal auxin transport9.33E-04
51GO:0006650: glycerophospholipid metabolic process9.33E-04
52GO:0010155: regulation of proton transport9.33E-04
53GO:0006729: tetrahydrobiopterin biosynthetic process9.33E-04
54GO:1903426: regulation of reactive oxygen species biosynthetic process9.33E-04
55GO:0007267: cell-cell signaling1.06E-03
56GO:0006352: DNA-templated transcription, initiation1.19E-03
57GO:0010027: thylakoid membrane organization1.22E-03
58GO:0016024: CDP-diacylglycerol biosynthetic process1.36E-03
59GO:0006000: fructose metabolic process1.52E-03
60GO:0046168: glycerol-3-phosphate catabolic process1.52E-03
61GO:0034051: negative regulation of plant-type hypersensitive response1.52E-03
62GO:0010160: formation of animal organ boundary1.52E-03
63GO:0044375: regulation of peroxisome size1.52E-03
64GO:0005977: glycogen metabolic process1.52E-03
65GO:0046621: negative regulation of organ growth1.52E-03
66GO:0009767: photosynthetic electron transport chain1.55E-03
67GO:0010143: cutin biosynthetic process1.75E-03
68GO:0009152: purine ribonucleotide biosynthetic process2.19E-03
69GO:0046653: tetrahydrofolate metabolic process2.19E-03
70GO:0010239: chloroplast mRNA processing2.19E-03
71GO:0033014: tetrapyrrole biosynthetic process2.19E-03
72GO:0043481: anthocyanin accumulation in tissues in response to UV light2.19E-03
73GO:0006072: glycerol-3-phosphate metabolic process2.19E-03
74GO:0008615: pyridoxine biosynthetic process2.19E-03
75GO:0006636: unsaturated fatty acid biosynthetic process2.19E-03
76GO:0042823: pyridoxal phosphate biosynthetic process2.19E-03
77GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly2.19E-03
78GO:0010371: regulation of gibberellin biosynthetic process2.19E-03
79GO:0044550: secondary metabolite biosynthetic process2.64E-03
80GO:0006633: fatty acid biosynthetic process2.89E-03
81GO:0019464: glycine decarboxylation via glycine cleavage system2.95E-03
82GO:0015994: chlorophyll metabolic process2.95E-03
83GO:0006546: glycine catabolic process2.95E-03
84GO:0010600: regulation of auxin biosynthetic process2.95E-03
85GO:0010021: amylopectin biosynthetic process2.95E-03
86GO:0042546: cell wall biogenesis3.38E-03
87GO:0006465: signal peptide processing3.78E-03
88GO:0000304: response to singlet oxygen3.78E-03
89GO:0006564: L-serine biosynthetic process3.78E-03
90GO:0009904: chloroplast accumulation movement3.78E-03
91GO:0045038: protein import into chloroplast thylakoid membrane3.78E-03
92GO:0031365: N-terminal protein amino acid modification3.78E-03
93GO:0009107: lipoate biosynthetic process3.78E-03
94GO:0006810: transport4.47E-03
95GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway4.68E-03
96GO:0006655: phosphatidylglycerol biosynthetic process4.68E-03
97GO:0060918: auxin transport4.68E-03
98GO:0006014: D-ribose metabolic process4.68E-03
99GO:0009228: thiamine biosynthetic process4.68E-03
100GO:0009741: response to brassinosteroid4.83E-03
101GO:0005975: carbohydrate metabolic process4.83E-03
102GO:0009791: post-embryonic development5.57E-03
103GO:0045926: negative regulation of growth5.64E-03
104GO:0010244: response to low fluence blue light stimulus by blue low-fluence system5.64E-03
105GO:0009903: chloroplast avoidance movement5.64E-03
106GO:1901259: chloroplast rRNA processing5.64E-03
107GO:0010189: vitamin E biosynthetic process5.64E-03
108GO:0006096: glycolytic process5.82E-03
109GO:0032502: developmental process6.38E-03
110GO:0009395: phospholipid catabolic process6.67E-03
111GO:0048437: floral organ development6.67E-03
112GO:1900057: positive regulation of leaf senescence6.67E-03
113GO:0006400: tRNA modification6.67E-03
114GO:0050829: defense response to Gram-negative bacterium6.67E-03
115GO:0010161: red light signaling pathway6.67E-03
116GO:0007155: cell adhesion7.76E-03
117GO:0010928: regulation of auxin mediated signaling pathway7.76E-03
118GO:0009690: cytokinin metabolic process7.76E-03
119GO:0042255: ribosome assembly7.76E-03
120GO:0032508: DNA duplex unwinding7.76E-03
121GO:0006353: DNA-templated transcription, termination7.76E-03
122GO:2000070: regulation of response to water deprivation7.76E-03
123GO:0050821: protein stabilization7.76E-03
124GO:0009932: cell tip growth8.91E-03
125GO:0006002: fructose 6-phosphate metabolic process8.91E-03
126GO:0015996: chlorophyll catabolic process8.91E-03
127GO:0007186: G-protein coupled receptor signaling pathway8.91E-03
128GO:0009657: plastid organization8.91E-03
129GO:0006526: arginine biosynthetic process8.91E-03
130GO:0009821: alkaloid biosynthetic process1.01E-02
131GO:0051865: protein autoubiquitination1.01E-02
132GO:0090305: nucleic acid phosphodiester bond hydrolysis1.01E-02
133GO:0010206: photosystem II repair1.01E-02
134GO:0006098: pentose-phosphate shunt1.01E-02
135GO:0090333: regulation of stomatal closure1.01E-02
136GO:0048507: meristem development1.01E-02
137GO:0006783: heme biosynthetic process1.01E-02
138GO:0010411: xyloglucan metabolic process1.02E-02
139GO:0018298: protein-chromophore linkage1.13E-02
140GO:0010205: photoinhibition1.14E-02
141GO:0009638: phototropism1.14E-02
142GO:0006779: porphyrin-containing compound biosynthetic process1.14E-02
143GO:0006811: ion transport1.25E-02
144GO:0006535: cysteine biosynthetic process from serine1.27E-02
145GO:0043069: negative regulation of programmed cell death1.27E-02
146GO:0007568: aging1.31E-02
147GO:0019684: photosynthesis, light reaction1.41E-02
148GO:0008285: negative regulation of cell proliferation1.41E-02
149GO:0016485: protein processing1.41E-02
150GO:0016051: carbohydrate biosynthetic process1.44E-02
151GO:0009637: response to blue light1.44E-02
152GO:0008361: regulation of cell size1.55E-02
153GO:0045037: protein import into chloroplast stroma1.55E-02
154GO:0009725: response to hormone1.70E-02
155GO:0005986: sucrose biosynthetic process1.70E-02
156GO:0030048: actin filament-based movement1.70E-02
157GO:0009785: blue light signaling pathway1.70E-02
158GO:0018107: peptidyl-threonine phosphorylation1.70E-02
159GO:0009718: anthocyanin-containing compound biosynthetic process1.70E-02
160GO:0034605: cellular response to heat1.85E-02
161GO:0010020: chloroplast fission1.85E-02
162GO:0019253: reductive pentose-phosphate cycle1.85E-02
163GO:0010540: basipetal auxin transport1.85E-02
164GO:0009266: response to temperature stimulus1.85E-02
165GO:0009640: photomorphogenesis1.86E-02
166GO:0007031: peroxisome organization2.01E-02
167GO:0042343: indole glucosinolate metabolic process2.01E-02
168GO:0010025: wax biosynthetic process2.17E-02
169GO:0006833: water transport2.17E-02
170GO:0019344: cysteine biosynthetic process2.33E-02
171GO:0010073: meristem maintenance2.50E-02
172GO:0048511: rhythmic process2.68E-02
173GO:0098542: defense response to other organism2.68E-02
174GO:0010431: seed maturation2.68E-02
175GO:0061077: chaperone-mediated protein folding2.68E-02
176GO:0031408: oxylipin biosynthetic process2.68E-02
177GO:0006306: DNA methylation2.68E-02
178GO:0016114: terpenoid biosynthetic process2.68E-02
179GO:0003333: amino acid transmembrane transport2.68E-02
180GO:0010017: red or far-red light signaling pathway2.85E-02
181GO:0016226: iron-sulfur cluster assembly2.85E-02
182GO:0030433: ubiquitin-dependent ERAD pathway2.85E-02
183GO:0080092: regulation of pollen tube growth2.85E-02
184GO:0019748: secondary metabolic process2.85E-02
185GO:0010227: floral organ abscission3.04E-02
186GO:0006817: phosphate ion transport3.22E-02
187GO:0048443: stamen development3.22E-02
188GO:0009306: protein secretion3.22E-02
189GO:0009735: response to cytokinin3.33E-02
190GO:0042335: cuticle development3.61E-02
191GO:0034220: ion transmembrane transport3.61E-02
192GO:0009742: brassinosteroid mediated signaling pathway3.78E-02
193GO:0009958: positive gravitropism3.81E-02
194GO:0045489: pectin biosynthetic process3.81E-02
195GO:0010182: sugar mediated signaling pathway3.81E-02
196GO:0009646: response to absence of light4.01E-02
197GO:0071555: cell wall organization4.05E-02
198GO:0010183: pollen tube guidance4.21E-02
199GO:0008654: phospholipid biosynthetic process4.21E-02
200GO:0007264: small GTPase mediated signal transduction4.63E-02
201GO:0009058: biosynthetic process4.69E-02
202GO:0030163: protein catabolic process4.85E-02
RankGO TermAdjusted P value
1GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity0.00E+00
2GO:0046406: magnesium protoporphyrin IX methyltransferase activity0.00E+00
3GO:0009673: low-affinity phosphate transmembrane transporter activity0.00E+00
4GO:0036361: racemase activity, acting on amino acids and derivatives0.00E+00
5GO:0045550: geranylgeranyl reductase activity0.00E+00
6GO:0050613: delta14-sterol reductase activity0.00E+00
7GO:0050278: sedoheptulose-bisphosphatase activity0.00E+00
8GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives0.00E+00
9GO:0008942: nitrite reductase [NAD(P)H] activity0.00E+00
10GO:0036033: mediator complex binding0.00E+00
11GO:0016491: oxidoreductase activity9.99E-07
12GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor6.19E-05
13GO:0016851: magnesium chelatase activity6.19E-05
14GO:0016987: sigma factor activity1.09E-04
15GO:0001053: plastid sigma factor activity1.09E-04
16GO:0004332: fructose-bisphosphate aldolase activity2.39E-04
17GO:0000293: ferric-chelate reductase activity2.39E-04
18GO:0004366: glycerol-3-phosphate O-acyltransferase activity2.39E-04
19GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity4.32E-04
20GO:0005227: calcium activated cation channel activity4.32E-04
21GO:0080132: fatty acid alpha-hydroxylase activity4.32E-04
22GO:0010242: oxygen evolving activity4.32E-04
23GO:0004325: ferrochelatase activity4.32E-04
24GO:0042586: peptide deformylase activity4.32E-04
25GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity4.32E-04
26GO:0031957: very long-chain fatty acid-CoA ligase activity4.32E-04
27GO:0004328: formamidase activity4.32E-04
28GO:0009977: proton motive force dependent protein transmembrane transporter activity9.33E-04
29GO:0004617: phosphoglycerate dehydrogenase activity9.33E-04
30GO:0008661: 1-deoxy-D-xylulose-5-phosphate synthase activity9.33E-04
31GO:0015173: aromatic amino acid transmembrane transporter activity9.33E-04
32GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity9.33E-04
33GO:0018708: thiol S-methyltransferase activity9.33E-04
34GO:0019156: isoamylase activity9.33E-04
35GO:0008728: GTP diphosphokinase activity9.33E-04
36GO:0036381: pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity9.33E-04
37GO:0048531: beta-1,3-galactosyltransferase activity9.33E-04
38GO:0050017: L-3-cyanoalanine synthase activity9.33E-04
39GO:0042389: omega-3 fatty acid desaturase activity9.33E-04
40GO:0042802: identical protein binding1.10E-03
41GO:0010277: chlorophyllide a oxygenase [overall] activity1.52E-03
42GO:0005504: fatty acid binding1.52E-03
43GO:0016992: lipoate synthase activity1.52E-03
44GO:0003955: NAD(P)H dehydrogenase (quinone) activity1.52E-03
45GO:0016742: hydroxymethyl-, formyl- and related transferase activity1.52E-03
46GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity1.52E-03
47GO:0008864: formyltetrahydrofolate deformylase activity1.52E-03
48GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor1.52E-03
49GO:0004565: beta-galactosidase activity1.55E-03
50GO:0019843: rRNA binding2.03E-03
51GO:0004375: glycine dehydrogenase (decarboxylating) activity2.19E-03
52GO:0048027: mRNA 5'-UTR binding2.19E-03
53GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides2.19E-03
54GO:0009882: blue light photoreceptor activity2.19E-03
55GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor2.95E-03
56GO:0045430: chalcone isomerase activity2.95E-03
57GO:0043495: protein anchor2.95E-03
58GO:0005275: amine transmembrane transporter activity3.78E-03
59GO:0003727: single-stranded RNA binding3.82E-03
60GO:0051287: NAD binding4.10E-03
61GO:0004556: alpha-amylase activity4.68E-03
62GO:0035673: oligopeptide transmembrane transporter activity4.68E-03
63GO:0042578: phosphoric ester hydrolase activity4.68E-03
64GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity4.68E-03
65GO:0004124: cysteine synthase activity5.64E-03
66GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity5.64E-03
67GO:0102391: decanoate--CoA ligase activity5.64E-03
68GO:0004747: ribokinase activity5.64E-03
69GO:0005261: cation channel activity5.64E-03
70GO:0003886: DNA (cytosine-5-)-methyltransferase activity5.64E-03
71GO:0048038: quinone binding5.97E-03
72GO:0016762: xyloglucan:xyloglucosyl transferase activity5.97E-03
73GO:0019899: enzyme binding6.67E-03
74GO:0004467: long-chain fatty acid-CoA ligase activity6.67E-03
75GO:0008865: fructokinase activity7.76E-03
76GO:0008135: translation factor activity, RNA binding8.91E-03
77GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water8.91E-03
78GO:0071949: FAD binding1.01E-02
79GO:0005525: GTP binding1.01E-02
80GO:0016798: hydrolase activity, acting on glycosyl bonds1.02E-02
81GO:0004743: pyruvate kinase activity1.14E-02
82GO:0030955: potassium ion binding1.14E-02
83GO:0016844: strictosidine synthase activity1.14E-02
84GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen1.33E-02
85GO:0005089: Rho guanyl-nucleotide exchange factor activity1.41E-02
86GO:0003746: translation elongation factor activity1.44E-02
87GO:0005506: iron ion binding1.46E-02
88GO:0003993: acid phosphatase activity1.50E-02
89GO:0015198: oligopeptide transporter activity1.55E-02
90GO:0008081: phosphoric diester hydrolase activity1.70E-02
91GO:0010329: auxin efflux transmembrane transporter activity1.70E-02
92GO:0005315: inorganic phosphate transmembrane transporter activity1.70E-02
93GO:0031072: heat shock protein binding1.70E-02
94GO:0000155: phosphorelay sensor kinase activity1.70E-02
95GO:0003774: motor activity1.85E-02
96GO:0031624: ubiquitin conjugating enzyme binding1.85E-02
97GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.85E-02
98GO:0008266: poly(U) RNA binding1.85E-02
99GO:0051537: 2 iron, 2 sulfur cluster binding2.01E-02
100GO:0042626: ATPase activity, coupled to transmembrane movement of substances2.01E-02
101GO:0003755: peptidyl-prolyl cis-trans isomerase activity2.17E-02
102GO:0005528: FK506 binding2.33E-02
103GO:0051536: iron-sulfur cluster binding2.33E-02
104GO:0003899: DNA-directed 5'-3' RNA polymerase activity2.51E-02
105GO:0003690: double-stranded DNA binding2.60E-02
106GO:0004176: ATP-dependent peptidase activity2.68E-02
107GO:0022891: substrate-specific transmembrane transporter activity3.04E-02
108GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups3.06E-02
109GO:0016887: ATPase activity3.11E-02
110GO:0005515: protein binding3.16E-02
111GO:0003729: mRNA binding3.18E-02
112GO:0008233: peptidase activity3.30E-02
113GO:0005509: calcium ion binding3.55E-02
114GO:0052689: carboxylic ester hydrolase activity3.81E-02
115GO:0010181: FMN binding4.01E-02
116GO:0004872: receptor activity4.21E-02
117GO:0004871: signal transducer activity4.45E-02
118GO:0004518: nuclease activity4.63E-02
119GO:0004252: serine-type endopeptidase activity4.94E-02
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Gene type



Gene DE type