Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G11420

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0000491: small nucleolar ribonucleoprotein complex assembly0.00E+00
2GO:0010059: positive regulation of atrichoblast fate specification0.00E+00
3GO:0090627: plant epidermal cell differentiation0.00E+00
4GO:0090322: regulation of superoxide metabolic process0.00E+00
5GO:1901528: hydrogen peroxide mediated signaling pathway involved in stomatal movement0.00E+00
6GO:0080127: fruit septum development0.00E+00
7GO:0019988: charged-tRNA amino acid modification0.00E+00
8GO:0000492: box C/D snoRNP assembly0.00E+00
9GO:0042794: rRNA transcription from plastid promoter0.00E+00
10GO:0010323: negative regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway0.00E+00
11GO:0045014: negative regulation of transcription by glucose0.00E+00
12GO:0042793: transcription from plastid promoter4.97E-06
13GO:0009658: chloroplast organization8.75E-06
14GO:0042255: ribosome assembly2.01E-05
15GO:0006353: DNA-templated transcription, termination2.01E-05
16GO:0006518: peptide metabolic process2.92E-05
17GO:0042127: regulation of cell proliferation3.37E-05
18GO:0010305: leaf vascular tissue pattern formation5.39E-05
19GO:2000038: regulation of stomatal complex development1.11E-04
20GO:0010588: cotyledon vascular tissue pattern formation1.26E-04
21GO:0006364: rRNA processing1.35E-04
22GO:0048497: maintenance of floral organ identity1.71E-04
23GO:0009913: epidermal cell differentiation2.44E-04
24GO:0006401: RNA catabolic process4.22E-04
25GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic4.37E-04
26GO:0080112: seed growth4.37E-04
27GO:1905039: carboxylic acid transmembrane transport4.37E-04
28GO:1905200: gibberellic acid transmembrane transport4.37E-04
29GO:1903866: palisade mesophyll development4.37E-04
30GO:0010063: positive regulation of trichoblast fate specification4.37E-04
31GO:0033206: meiotic cytokinesis4.37E-04
32GO:0034757: negative regulation of iron ion transport4.37E-04
33GO:0048016: inositol phosphate-mediated signaling4.37E-04
34GO:0009793: embryo development ending in seed dormancy8.04E-04
35GO:1900865: chloroplast RNA modification9.07E-04
36GO:0010569: regulation of double-strand break repair via homologous recombination9.44E-04
37GO:0048731: system development9.44E-04
38GO:2000071: regulation of defense response by callose deposition9.44E-04
39GO:0010271: regulation of chlorophyll catabolic process9.44E-04
40GO:0009662: etioplast organization9.44E-04
41GO:1900033: negative regulation of trichome patterning9.44E-04
42GO:0080009: mRNA methylation9.44E-04
43GO:2000123: positive regulation of stomatal complex development9.44E-04
44GO:1901529: positive regulation of anion channel activity9.44E-04
45GO:0009967: positive regulation of signal transduction9.44E-04
46GO:0048829: root cap development1.06E-03
47GO:0006351: transcription, DNA-templated1.14E-03
48GO:0048367: shoot system development1.17E-03
49GO:0080117: secondary growth1.54E-03
50GO:0044210: 'de novo' CTP biosynthetic process1.54E-03
51GO:0090391: granum assembly1.54E-03
52GO:0042780: tRNA 3'-end processing1.54E-03
53GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic1.54E-03
54GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement1.54E-03
55GO:0010371: regulation of gibberellin biosynthetic process2.22E-03
56GO:0010071: root meristem specification2.22E-03
57GO:0033169: histone H3-K9 demethylation2.22E-03
58GO:0009102: biotin biosynthetic process2.22E-03
59GO:0007276: gamete generation2.22E-03
60GO:0043481: anthocyanin accumulation in tissues in response to UV light2.22E-03
61GO:0009733: response to auxin2.47E-03
62GO:0009734: auxin-activated signaling pathway2.49E-03
63GO:0006221: pyrimidine nucleotide biosynthetic process2.99E-03
64GO:0009956: radial pattern formation2.99E-03
65GO:0006808: regulation of nitrogen utilization2.99E-03
66GO:0006479: protein methylation2.99E-03
67GO:0048629: trichome patterning2.99E-03
68GO:1900864: mitochondrial RNA modification2.99E-03
69GO:0003333: amino acid transmembrane transport3.00E-03
70GO:2000022: regulation of jasmonic acid mediated signaling pathway3.28E-03
71GO:0006355: regulation of transcription, DNA-templated3.40E-03
72GO:0071215: cellular response to abscisic acid stimulus3.58E-03
73GO:0009831: plant-type cell wall modification involved in multidimensional cell growth3.58E-03
74GO:0080110: sporopollenin biosynthetic process3.83E-03
75GO:0016120: carotene biosynthetic process3.83E-03
76GO:0016123: xanthophyll biosynthetic process3.83E-03
77GO:0032957: inositol trisphosphate metabolic process3.83E-03
78GO:0032876: negative regulation of DNA endoreduplication3.83E-03
79GO:0030308: negative regulation of cell growth3.83E-03
80GO:0010375: stomatal complex patterning3.83E-03
81GO:0008033: tRNA processing4.56E-03
82GO:0010501: RNA secondary structure unwinding4.56E-03
83GO:0010087: phloem or xylem histogenesis4.56E-03
84GO:0010118: stomatal movement4.56E-03
85GO:1902456: regulation of stomatal opening4.74E-03
86GO:0048831: regulation of shoot system development4.74E-03
87GO:0046855: inositol phosphate dephosphorylation4.74E-03
88GO:0003006: developmental process involved in reproduction4.74E-03
89GO:0009643: photosynthetic acclimation4.74E-03
90GO:0016554: cytidine to uridine editing4.74E-03
91GO:0048825: cotyledon development5.68E-03
92GO:0010067: procambium histogenesis5.72E-03
93GO:2000033: regulation of seed dormancy process5.72E-03
94GO:0048509: regulation of meristem development5.72E-03
95GO:2000037: regulation of stomatal complex patterning5.72E-03
96GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity5.72E-03
97GO:0010310: regulation of hydrogen peroxide metabolic process5.72E-03
98GO:0080156: mitochondrial mRNA modification6.08E-03
99GO:0010583: response to cyclopentenone6.50E-03
100GO:0032502: developmental process6.50E-03
101GO:0048437: floral organ development6.76E-03
102GO:0010098: suspensor development6.76E-03
103GO:0000082: G1/S transition of mitotic cell cycle6.76E-03
104GO:0010444: guard mother cell differentiation6.76E-03
105GO:0010103: stomatal complex morphogenesis6.76E-03
106GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway6.76E-03
107GO:0010374: stomatal complex development6.76E-03
108GO:0009828: plant-type cell wall loosening7.38E-03
109GO:0009787: regulation of abscisic acid-activated signaling pathway7.86E-03
110GO:0009938: negative regulation of gibberellic acid mediated signaling pathway7.86E-03
111GO:0009642: response to light intensity7.86E-03
112GO:0006402: mRNA catabolic process7.86E-03
113GO:0046620: regulation of organ growth7.86E-03
114GO:0010492: maintenance of shoot apical meristem identity7.86E-03
115GO:0052543: callose deposition in cell wall7.86E-03
116GO:0007186: G-protein coupled receptor signaling pathway9.03E-03
117GO:0019430: removal of superoxide radicals9.03E-03
118GO:0010233: phloem transport9.03E-03
119GO:0010497: plasmodesmata-mediated intercellular transport9.03E-03
120GO:0048574: long-day photoperiodism, flowering9.03E-03
121GO:0010052: guard cell differentiation9.03E-03
122GO:0032544: plastid translation9.03E-03
123GO:0007389: pattern specification process9.03E-03
124GO:0009827: plant-type cell wall modification9.03E-03
125GO:0010029: regulation of seed germination9.33E-03
126GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway9.76E-03
127GO:0048507: meristem development1.03E-02
128GO:0000373: Group II intron splicing1.03E-02
129GO:0048589: developmental growth1.03E-02
130GO:0000902: cell morphogenesis1.03E-02
131GO:0009845: seed germination1.11E-02
132GO:0042761: very long-chain fatty acid biosynthetic process1.15E-02
133GO:0006349: regulation of gene expression by genetic imprinting1.15E-02
134GO:0048481: plant ovule development1.15E-02
135GO:0031425: chloroplast RNA processing1.15E-02
136GO:0006468: protein phosphorylation1.23E-02
137GO:0006535: cysteine biosynthetic process from serine1.29E-02
138GO:0045036: protein targeting to chloroplast1.29E-02
139GO:0016441: posttranscriptional gene silencing1.29E-02
140GO:0006949: syncytium formation1.29E-02
141GO:0010048: vernalization response1.29E-02
142GO:0006865: amino acid transport1.40E-02
143GO:0009682: induced systemic resistance1.43E-02
144GO:0015770: sucrose transport1.43E-02
145GO:1903507: negative regulation of nucleic acid-templated transcription1.43E-02
146GO:0009750: response to fructose1.43E-02
147GO:0048765: root hair cell differentiation1.43E-02
148GO:0046856: phosphatidylinositol dephosphorylation1.43E-02
149GO:0040008: regulation of growth1.43E-02
150GO:0009867: jasmonic acid mediated signaling pathway1.47E-02
151GO:0010152: pollen maturation1.57E-02
152GO:0045037: protein import into chloroplast stroma1.57E-02
153GO:0010582: floral meristem determinacy1.57E-02
154GO:0008361: regulation of cell size1.57E-02
155GO:0012501: programmed cell death1.57E-02
156GO:0030001: metal ion transport1.67E-02
157GO:0010102: lateral root morphogenesis1.72E-02
158GO:0009739: response to gibberellin1.75E-02
159GO:0006397: mRNA processing1.78E-02
160GO:0010020: chloroplast fission1.87E-02
161GO:0009933: meristem structural organization1.87E-02
162GO:0006270: DNA replication initiation1.87E-02
163GO:0009887: animal organ morphogenesis1.87E-02
164GO:0010540: basipetal auxin transport1.87E-02
165GO:0048467: gynoecium development1.87E-02
166GO:0008380: RNA splicing1.90E-02
167GO:0009744: response to sucrose1.90E-02
168GO:0009825: multidimensional cell growth2.03E-02
169GO:0080188: RNA-directed DNA methylation2.03E-02
170GO:0009901: anther dehiscence2.03E-02
171GO:0006636: unsaturated fatty acid biosynthetic process2.20E-02
172GO:0031347: regulation of defense response2.30E-02
173GO:0009863: salicylic acid mediated signaling pathway2.36E-02
174GO:0080147: root hair cell development2.36E-02
175GO:0010187: negative regulation of seed germination2.36E-02
176GO:2000377: regulation of reactive oxygen species metabolic process2.36E-02
177GO:0019344: cysteine biosynthetic process2.36E-02
178GO:0009664: plant-type cell wall organization2.38E-02
179GO:0006874: cellular calcium ion homeostasis2.54E-02
180GO:0007165: signal transduction2.60E-02
181GO:0010431: seed maturation2.71E-02
182GO:0030245: cellulose catabolic process2.89E-02
183GO:0048316: seed development3.12E-02
184GO:0010091: trichome branching3.27E-02
185GO:0010584: pollen exine formation3.27E-02
186GO:0048443: stamen development3.27E-02
187GO:0009740: gibberellic acid mediated signaling pathway3.43E-02
188GO:0070417: cellular response to cold3.46E-02
189GO:0009624: response to nematode3.64E-02
190GO:0042335: cuticle development3.66E-02
191GO:0080022: primary root development3.66E-02
192GO:0010051: xylem and phloem pattern formation3.66E-02
193GO:0042631: cellular response to water deprivation3.66E-02
194GO:0006396: RNA processing3.74E-02
195GO:0051726: regulation of cell cycle3.85E-02
196GO:0009741: response to brassinosteroid3.86E-02
197GO:0009960: endosperm development3.86E-02
198GO:0009416: response to light stimulus3.89E-02
199GO:0048544: recognition of pollen4.06E-02
200GO:0007018: microtubule-based movement4.06E-02
201GO:0009749: response to glucose4.27E-02
202GO:0045892: negative regulation of transcription, DNA-templated4.38E-02
203GO:0002229: defense response to oomycetes4.48E-02
204GO:0031047: gene silencing by RNA4.69E-02
205GO:0045893: positive regulation of transcription, DNA-templated4.74E-02
206GO:0030163: protein catabolic process4.91E-02
207GO:0010090: trichome morphogenesis4.91E-02
RankGO TermAdjusted P value
1GO:0004141: dethiobiotin synthase activity0.00E+00
2GO:0071633: dihydroceramidase activity0.00E+00
3GO:0004015: adenosylmethionine-8-amino-7-oxononanoate transaminase activity0.00E+00
4GO:0043399: tRNA A64-2'-O-ribosylphosphate transferase activity0.00E+00
5GO:0016763: transferase activity, transferring pentosyl groups0.00E+00
6GO:0008859: exoribonuclease II activity0.00E+00
7GO:0003727: single-stranded RNA binding3.37E-05
8GO:0003723: RNA binding8.72E-05
9GO:0004930: G-protein coupled receptor activity1.11E-04
10GO:0003700: transcription factor activity, sequence-specific DNA binding1.44E-04
11GO:0019843: rRNA binding4.20E-04
12GO:0046030: inositol trisphosphate phosphatase activity4.37E-04
13GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity4.37E-04
14GO:0016274: protein-arginine N-methyltransferase activity4.37E-04
15GO:0016901: oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor4.37E-04
16GO:0004654: polyribonucleotide nucleotidyltransferase activity4.37E-04
17GO:0004016: adenylate cyclase activity4.37E-04
18GO:1905201: gibberellin transmembrane transporter activity4.37E-04
19GO:0008173: RNA methyltransferase activity6.43E-04
20GO:0043565: sequence-specific DNA binding6.53E-04
21GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity9.44E-04
22GO:0005078: MAP-kinase scaffold activity9.44E-04
23GO:0009884: cytokinin receptor activity9.44E-04
24GO:0032454: histone demethylase activity (H3-K9 specific)9.44E-04
25GO:0042389: omega-3 fatty acid desaturase activity9.44E-04
26GO:0004809: tRNA (guanine-N2-)-methyltransferase activity9.44E-04
27GO:0042781: 3'-tRNA processing endoribonuclease activity1.54E-03
28GO:0005034: osmosensor activity1.54E-03
29GO:0017150: tRNA dihydrouridine synthase activity1.54E-03
30GO:0000175: 3'-5'-exoribonuclease activity1.58E-03
31GO:0009041: uridylate kinase activity2.22E-03
32GO:0003883: CTP synthase activity2.22E-03
33GO:0001872: (1->3)-beta-D-glucan binding2.22E-03
34GO:0008289: lipid binding2.43E-03
35GO:0010011: auxin binding2.99E-03
36GO:0010328: auxin influx transmembrane transporter activity2.99E-03
37GO:0030570: pectate lyase activity3.58E-03
38GO:0004888: transmembrane signaling receptor activity3.83E-03
39GO:0004784: superoxide dismutase activity4.74E-03
40GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity4.74E-03
41GO:0003688: DNA replication origin binding4.74E-03
42GO:0003690: double-stranded DNA binding5.03E-03
43GO:0004519: endonuclease activity5.43E-03
44GO:0019901: protein kinase binding5.68E-03
45GO:0019900: kinase binding5.72E-03
46GO:0004124: cysteine synthase activity5.72E-03
47GO:0008168: methyltransferase activity6.31E-03
48GO:0030515: snoRNA binding6.76E-03
49GO:0008026: ATP-dependent helicase activity8.14E-03
50GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water9.03E-03
51GO:0003724: RNA helicase activity9.03E-03
52GO:0000989: transcription factor activity, transcription factor binding1.03E-02
53GO:0004004: ATP-dependent RNA helicase activity1.04E-02
54GO:0003677: DNA binding1.13E-02
55GO:0031490: chromatin DNA binding1.15E-02
56GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding1.19E-02
57GO:0004222: metalloendopeptidase activity1.27E-02
58GO:0004673: protein histidine kinase activity1.29E-02
59GO:0042803: protein homodimerization activity1.31E-02
60GO:0008515: sucrose transmembrane transporter activity1.43E-02
61GO:0005515: protein binding1.43E-02
62GO:0000976: transcription regulatory region sequence-specific DNA binding1.57E-02
63GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity1.57E-02
64GO:0004674: protein serine/threonine kinase activity1.60E-02
65GO:0003725: double-stranded RNA binding1.72E-02
66GO:0000155: phosphorelay sensor kinase activity1.72E-02
67GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.87E-02
68GO:0051119: sugar transmembrane transporter activity2.03E-02
69GO:0005217: intracellular ligand-gated ion channel activity2.03E-02
70GO:0004970: ionotropic glutamate receptor activity2.03E-02
71GO:0004190: aspartic-type endopeptidase activity2.03E-02
72GO:0015293: symporter activity2.13E-02
73GO:0003714: transcription corepressor activity2.36E-02
74GO:0043424: protein histidine kinase binding2.54E-02
75GO:0016788: hydrolase activity, acting on ester bonds2.70E-02
76GO:0004540: ribonuclease activity2.71E-02
77GO:0015171: amino acid transmembrane transporter activity2.83E-02
78GO:0003777: microtubule motor activity2.83E-02
79GO:0008810: cellulase activity3.08E-02
80GO:0018024: histone-lysine N-methyltransferase activity3.46E-02
81GO:0005102: receptor binding3.46E-02
82GO:0003779: actin binding3.53E-02
83GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity3.86E-02
84GO:0001085: RNA polymerase II transcription factor binding3.86E-02
85GO:0052689: carboxylic ester hydrolase activity3.90E-02
86GO:0050662: coenzyme binding4.06E-02
87GO:0048038: quinone binding4.48E-02
88GO:0004871: signal transducer activity4.55E-02
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Gene type



Gene DE type