Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G11160

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0042817: pyridoxal metabolic process0.00E+00
2GO:0031129: inductive cell-cell signaling0.00E+00
3GO:0071474: cellular hyperosmotic response0.00E+00
4GO:2001294: malonyl-CoA catabolic process0.00E+00
5GO:1902458: positive regulation of stomatal opening0.00E+00
6GO:0043488: regulation of mRNA stability0.00E+00
7GO:0045176: apical protein localization0.00E+00
8GO:0090706: specification of plant organ position0.00E+00
9GO:0046460: neutral lipid biosynthetic process0.00E+00
10GO:0031054: pre-miRNA processing0.00E+00
11GO:0090279: regulation of calcium ion import0.00E+00
12GO:0031116: positive regulation of microtubule polymerization0.00E+00
13GO:0010068: protoderm histogenesis0.00E+00
14GO:2000121: regulation of removal of superoxide radicals0.00E+00
15GO:0007037: vacuolar phosphate transport0.00E+00
16GO:0045038: protein import into chloroplast thylakoid membrane6.52E-06
17GO:1903426: regulation of reactive oxygen species biosynthetic process1.65E-05
18GO:1900865: chloroplast RNA modification1.14E-04
19GO:0009647: skotomorphogenesis1.15E-04
20GO:0051322: anaphase1.96E-04
21GO:0006021: inositol biosynthetic process1.96E-04
22GO:1902183: regulation of shoot apical meristem development2.97E-04
23GO:0010158: abaxial cell fate specification2.97E-04
24GO:0009648: photoperiodism5.51E-04
25GO:0071028: nuclear mRNA surveillance6.19E-04
26GO:0043266: regulation of potassium ion transport6.19E-04
27GO:0006659: phosphatidylserine biosynthetic process6.19E-04
28GO:0043087: regulation of GTPase activity6.19E-04
29GO:2000021: regulation of ion homeostasis6.19E-04
30GO:0006264: mitochondrial DNA replication6.19E-04
31GO:0033259: plastid DNA replication6.19E-04
32GO:0006177: GMP biosynthetic process6.19E-04
33GO:0005991: trehalose metabolic process6.19E-04
34GO:0010450: inflorescence meristem growth6.19E-04
35GO:0051171: regulation of nitrogen compound metabolic process6.19E-04
36GO:0010482: regulation of epidermal cell division6.19E-04
37GO:0010362: negative regulation of anion channel activity by blue light6.19E-04
38GO:0031426: polycistronic mRNA processing6.19E-04
39GO:2000070: regulation of response to water deprivation8.76E-04
40GO:0007155: cell adhesion8.76E-04
41GO:0010206: photosystem II repair1.27E-03
42GO:2000024: regulation of leaf development1.27E-03
43GO:2000039: regulation of trichome morphogenesis1.33E-03
44GO:0007154: cell communication1.33E-03
45GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation1.33E-03
46GO:1900033: negative regulation of trichome patterning1.33E-03
47GO:0042814: monopolar cell growth1.33E-03
48GO:0034755: iron ion transmembrane transport1.33E-03
49GO:0031125: rRNA 3'-end processing1.33E-03
50GO:0010155: regulation of proton transport1.33E-03
51GO:0015804: neutral amino acid transport1.33E-03
52GO:0071051: polyadenylation-dependent snoRNA 3'-end processing1.33E-03
53GO:0051262: protein tetramerization1.33E-03
54GO:0006739: NADP metabolic process1.33E-03
55GO:1905011: transmembrane phosphate ion transport from cytosol to vacuole1.33E-03
56GO:0034475: U4 snRNA 3'-end processing1.33E-03
57GO:1900871: chloroplast mRNA modification1.33E-03
58GO:0030187: melatonin biosynthetic process1.33E-03
59GO:0009638: phototropism1.51E-03
60GO:0009585: red, far-red light phototransduction1.94E-03
61GO:0009684: indoleacetic acid biosynthetic process2.04E-03
62GO:0009405: pathogenesis2.19E-03
63GO:0080055: low-affinity nitrate transport2.19E-03
64GO:0045604: regulation of epidermal cell differentiation2.19E-03
65GO:0009150: purine ribonucleotide metabolic process2.19E-03
66GO:0001578: microtubule bundle formation2.19E-03
67GO:0045493: xylan catabolic process2.19E-03
68GO:0006753: nucleoside phosphate metabolic process2.19E-03
69GO:0045165: cell fate commitment2.19E-03
70GO:0016075: rRNA catabolic process2.19E-03
71GO:0033591: response to L-ascorbic acid2.19E-03
72GO:0034427: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'2.19E-03
73GO:0051127: positive regulation of actin nucleation2.19E-03
74GO:0010589: leaf proximal/distal pattern formation2.19E-03
75GO:0006790: sulfur compound metabolic process2.34E-03
76GO:0007166: cell surface receptor signaling pathway2.40E-03
77GO:0006164: purine nucleotide biosynthetic process3.19E-03
78GO:0009963: positive regulation of flavonoid biosynthetic process3.19E-03
79GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly3.19E-03
80GO:0009102: biotin biosynthetic process3.19E-03
81GO:0010239: chloroplast mRNA processing3.19E-03
82GO:0009226: nucleotide-sugar biosynthetic process3.19E-03
83GO:0048645: animal organ formation3.19E-03
84GO:0008615: pyridoxine biosynthetic process3.19E-03
85GO:0010255: glucose mediated signaling pathway3.19E-03
86GO:0048530: fruit morphogenesis3.19E-03
87GO:0046739: transport of virus in multicellular host3.19E-03
88GO:0042753: positive regulation of circadian rhythm3.76E-03
89GO:0009416: response to light stimulus3.78E-03
90GO:0009658: chloroplast organization4.11E-03
91GO:0009944: polarity specification of adaxial/abaxial axis4.18E-03
92GO:0009649: entrainment of circadian clock4.30E-03
93GO:0006734: NADH metabolic process4.30E-03
94GO:0007020: microtubule nucleation4.30E-03
95GO:0008295: spermidine biosynthetic process4.30E-03
96GO:0032366: intracellular sterol transport4.30E-03
97GO:0048629: trichome patterning4.30E-03
98GO:0009765: photosynthesis, light harvesting4.30E-03
99GO:0035279: mRNA cleavage involved in gene silencing by miRNA4.30E-03
100GO:0022622: root system development4.30E-03
101GO:0046283: anthocyanin-containing compound metabolic process5.52E-03
102GO:0009904: chloroplast accumulation movement5.52E-03
103GO:0016120: carotene biosynthetic process5.52E-03
104GO:0006544: glycine metabolic process5.52E-03
105GO:0016123: xanthophyll biosynthetic process5.52E-03
106GO:0046785: microtubule polymerization5.52E-03
107GO:0034052: positive regulation of plant-type hypersensitive response5.52E-03
108GO:0006631: fatty acid metabolic process5.82E-03
109GO:0000741: karyogamy6.85E-03
110GO:0006563: L-serine metabolic process6.85E-03
111GO:0046855: inositol phosphate dephosphorylation6.85E-03
112GO:0048827: phyllome development6.85E-03
113GO:0010264: myo-inositol hexakisphosphate biosynthetic process6.85E-03
114GO:0016554: cytidine to uridine editing6.85E-03
115GO:0009920: cell plate formation involved in plant-type cell wall biogenesis6.85E-03
116GO:0009789: positive regulation of abscisic acid-activated signaling pathway7.18E-03
117GO:0048280: vesicle fusion with Golgi apparatus8.28E-03
118GO:0034389: lipid particle organization8.28E-03
119GO:0009099: valine biosynthetic process8.28E-03
120GO:0009903: chloroplast avoidance movement8.28E-03
121GO:0030488: tRNA methylation8.28E-03
122GO:0048444: floral organ morphogenesis8.28E-03
123GO:0080086: stamen filament development8.28E-03
124GO:0042372: phylloquinone biosynthetic process8.28E-03
125GO:0009082: branched-chain amino acid biosynthetic process8.28E-03
126GO:0010154: fruit development8.37E-03
127GO:0010182: sugar mediated signaling pathway8.37E-03
128GO:0009958: positive gravitropism8.37E-03
129GO:0045489: pectin biosynthetic process8.37E-03
130GO:0007018: microtubule-based movement9.01E-03
131GO:0048825: cotyledon development9.68E-03
132GO:0009791: post-embryonic development9.68E-03
133GO:0035196: production of miRNAs involved in gene silencing by miRNA9.81E-03
134GO:0032880: regulation of protein localization9.81E-03
135GO:0009395: phospholipid catabolic process9.81E-03
136GO:0048528: post-embryonic root development9.81E-03
137GO:0015937: coenzyme A biosynthetic process9.81E-03
138GO:0010196: nonphotochemical quenching9.81E-03
139GO:0010583: response to cyclopentenone1.11E-02
140GO:0016032: viral process1.11E-02
141GO:0010078: maintenance of root meristem identity1.14E-02
142GO:0009704: de-etiolation1.14E-02
143GO:0046620: regulation of organ growth1.14E-02
144GO:0070413: trehalose metabolism in response to stress1.14E-02
145GO:0052543: callose deposition in cell wall1.14E-02
146GO:0043068: positive regulation of programmed cell death1.14E-02
147GO:0048367: shoot system development1.22E-02
148GO:0009097: isoleucine biosynthetic process1.32E-02
149GO:0006997: nucleus organization1.32E-02
150GO:0043562: cellular response to nitrogen levels1.32E-02
151GO:0010093: specification of floral organ identity1.32E-02
152GO:0022900: electron transport chain1.32E-02
153GO:0015996: chlorophyll catabolic process1.32E-02
154GO:0007186: G-protein coupled receptor signaling pathway1.32E-02
155GO:0000910: cytokinesis1.42E-02
156GO:0019432: triglyceride biosynthetic process1.50E-02
157GO:0048507: meristem development1.50E-02
158GO:0000373: Group II intron splicing1.50E-02
159GO:0006189: 'de novo' IMP biosynthetic process1.50E-02
160GO:0016126: sterol biosynthetic process1.51E-02
161GO:0048354: mucilage biosynthetic process involved in seed coat development1.68E-02
162GO:0010380: regulation of chlorophyll biosynthetic process1.68E-02
163GO:0010267: production of ta-siRNAs involved in RNA interference1.68E-02
164GO:0042761: very long-chain fatty acid biosynthetic process1.68E-02
165GO:0009098: leucine biosynthetic process1.68E-02
166GO:0010018: far-red light signaling pathway1.68E-02
167GO:0009627: systemic acquired resistance1.69E-02
168GO:0015995: chlorophyll biosynthetic process1.78E-02
169GO:0045036: protein targeting to chloroplast1.88E-02
170GO:0009641: shade avoidance1.88E-02
171GO:0006949: syncytium formation1.88E-02
172GO:0010192: mucilage biosynthetic process1.88E-02
173GO:0006896: Golgi to vacuole transport1.88E-02
174GO:0006535: cysteine biosynthetic process from serine1.88E-02
175GO:0009832: plant-type cell wall biogenesis2.07E-02
176GO:1903507: negative regulation of nucleic acid-templated transcription2.08E-02
177GO:0006879: cellular iron ion homeostasis2.08E-02
178GO:0006415: translational termination2.08E-02
179GO:0019684: photosynthesis, light reaction2.08E-02
180GO:0009089: lysine biosynthetic process via diaminopimelate2.08E-02
181GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.17E-02
182GO:0006811: ion transport2.18E-02
183GO:0009733: response to auxin2.19E-02
184GO:0048527: lateral root development2.28E-02
185GO:0010119: regulation of stomatal movement2.28E-02
186GO:0016024: CDP-diacylglycerol biosynthetic process2.30E-02
187GO:0045037: protein import into chloroplast stroma2.30E-02
188GO:0009785: blue light signaling pathway2.52E-02
189GO:0010229: inflorescence development2.52E-02
190GO:0030036: actin cytoskeleton organization2.52E-02
191GO:0009718: anthocyanin-containing compound biosynthetic process2.52E-02
192GO:0009767: photosynthetic electron transport chain2.52E-02
193GO:0010588: cotyledon vascular tissue pattern formation2.52E-02
194GO:2000012: regulation of auxin polar transport2.52E-02
195GO:0010020: chloroplast fission2.74E-02
196GO:0009933: meristem structural organization2.74E-02
197GO:0010540: basipetal auxin transport2.74E-02
198GO:0048467: gynoecium development2.74E-02
199GO:0010207: photosystem II assembly2.74E-02
200GO:0010143: cutin biosynthetic process2.74E-02
201GO:0006541: glutamine metabolic process2.74E-02
202GO:0090351: seedling development2.97E-02
203GO:0010030: positive regulation of seed germination2.97E-02
204GO:0045490: pectin catabolic process2.97E-02
205GO:0046854: phosphatidylinositol phosphorylation2.97E-02
206GO:0007623: circadian rhythm2.97E-02
207GO:0019853: L-ascorbic acid biosynthetic process2.97E-02
208GO:0009825: multidimensional cell growth2.97E-02
209GO:0009833: plant-type primary cell wall biogenesis3.21E-02
210GO:0006071: glycerol metabolic process3.21E-02
211GO:0000162: tryptophan biosynthetic process3.21E-02
212GO:0010025: wax biosynthetic process3.21E-02
213GO:0009640: photomorphogenesis3.23E-02
214GO:0000027: ribosomal large subunit assembly3.46E-02
215GO:0007010: cytoskeleton organization3.46E-02
216GO:0010187: negative regulation of seed germination3.46E-02
217GO:0005992: trehalose biosynthetic process3.46E-02
218GO:0019344: cysteine biosynthetic process3.46E-02
219GO:0016042: lipid catabolic process3.52E-02
220GO:0043622: cortical microtubule organization3.71E-02
221GO:0007017: microtubule-based process3.71E-02
222GO:0003333: amino acid transmembrane transport3.97E-02
223GO:0048511: rhythmic process3.97E-02
224GO:0071555: cell wall organization4.21E-02
225GO:0035428: hexose transmembrane transport4.23E-02
226GO:0031348: negative regulation of defense response4.23E-02
227GO:0009814: defense response, incompatible interaction4.23E-02
228GO:2000022: regulation of jasmonic acid mediated signaling pathway4.23E-02
229GO:0009831: plant-type cell wall modification involved in multidimensional cell growth4.50E-02
230GO:0019722: calcium-mediated signaling4.78E-02
231GO:0009306: protein secretion4.78E-02
232GO:0010214: seed coat development4.78E-02
233GO:0010091: trichome branching4.78E-02
RankGO TermAdjusted P value
1GO:0080176: xyloglucan 1,6-alpha-xylosidase activity0.00E+00
2GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives0.00E+00
3GO:0045435: lycopene epsilon cyclase activity0.00E+00
4GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
5GO:0004639: phosphoribosylaminoimidazolesuccinocarboxamide synthase activity0.00E+00
6GO:1990534: thermospermine oxidase activity0.00E+00
7GO:0036033: mediator complex binding0.00E+00
8GO:0004740: pyruvate dehydrogenase (acetyl-transferring) kinase activity0.00E+00
9GO:0004076: biotin synthase activity0.00E+00
10GO:0004059: aralkylamine N-acetyltransferase activity0.00E+00
11GO:0061634: alpha-D-xyloside xylohydrolase0.00E+00
12GO:0043864: indoleacetamide hydrolase activity0.00E+00
13GO:0036361: racemase activity, acting on amino acids and derivatives0.00E+00
14GO:0050613: delta14-sterol reductase activity0.00E+00
15GO:0004040: amidase activity2.97E-04
16GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.90E-04
17GO:0000293: ferric-chelate reductase activity4.15E-04
18GO:0008017: microtubule binding4.96E-04
19GO:0052857: NADPHX epimerase activity6.19E-04
20GO:0004328: formamidase activity6.19E-04
21GO:0052856: NADHX epimerase activity6.19E-04
22GO:0010347: L-galactose-1-phosphate phosphatase activity6.19E-04
23GO:0050139: nicotinate-N-glucosyltransferase activity6.19E-04
24GO:0005227: calcium activated cation channel activity6.19E-04
25GO:0004733: pyridoxamine-phosphate oxidase activity6.19E-04
26GO:0010945: CoA pyrophosphatase activity6.19E-04
27GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity6.19E-04
28GO:0030570: pectate lyase activity7.80E-04
29GO:0016788: hydrolase activity, acting on ester bonds1.13E-03
30GO:0052833: inositol monophosphate 4-phosphatase activity1.33E-03
31GO:0015929: hexosaminidase activity1.33E-03
32GO:0004563: beta-N-acetylhexosaminidase activity1.33E-03
33GO:0015172: acidic amino acid transmembrane transporter activity1.33E-03
34GO:0004512: inositol-3-phosphate synthase activity1.33E-03
35GO:0050017: L-3-cyanoalanine synthase activity1.33E-03
36GO:0017118: lipoyltransferase activity1.33E-03
37GO:0048531: beta-1,3-galactosyltransferase activity1.33E-03
38GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity1.33E-03
39GO:0009977: proton motive force dependent protein transmembrane transporter activity1.33E-03
40GO:0003938: IMP dehydrogenase activity1.33E-03
41GO:0004766: spermidine synthase activity1.33E-03
42GO:0052832: inositol monophosphate 3-phosphatase activity1.33E-03
43GO:0080097: L-tryptophan:pyruvate aminotransferase activity1.33E-03
44GO:0016630: protochlorophyllide reductase activity1.33E-03
45GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase1.33E-03
46GO:0008934: inositol monophosphate 1-phosphatase activity1.33E-03
47GO:0047372: acylglycerol lipase activity2.04E-03
48GO:0004148: dihydrolipoyl dehydrogenase activity2.19E-03
49GO:0004049: anthranilate synthase activity2.19E-03
50GO:0080054: low-affinity nitrate transmembrane transporter activity2.19E-03
51GO:0005504: fatty acid binding2.19E-03
52GO:0003913: DNA photolyase activity2.19E-03
53GO:0003777: microtubule motor activity2.27E-03
54GO:0042802: identical protein binding2.90E-03
55GO:0042973: glucan endo-1,3-beta-D-glucosidase activity3.00E-03
56GO:0030247: polysaccharide binding3.02E-03
57GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides3.19E-03
58GO:0052656: L-isoleucine transaminase activity3.19E-03
59GO:0009882: blue light photoreceptor activity3.19E-03
60GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor3.19E-03
61GO:0047627: adenylylsulfatase activity3.19E-03
62GO:0016851: magnesium chelatase activity3.19E-03
63GO:0052654: L-leucine transaminase activity3.19E-03
64GO:0035198: miRNA binding3.19E-03
65GO:0052655: L-valine transaminase activity3.19E-03
66GO:0001872: (1->3)-beta-D-glucan binding3.19E-03
67GO:0003825: alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity3.19E-03
68GO:0000254: C-4 methylsterol oxidase activity3.19E-03
69GO:0015175: neutral amino acid transmembrane transporter activity3.19E-03
70GO:0008893: guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity3.19E-03
71GO:0048027: mRNA 5'-UTR binding3.19E-03
72GO:0004084: branched-chain-amino-acid transaminase activity4.30E-03
73GO:0046556: alpha-L-arabinofuranosidase activity4.30E-03
74GO:0008409: 5'-3' exonuclease activity4.30E-03
75GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds4.30E-03
76GO:0045430: chalcone isomerase activity4.30E-03
77GO:0080032: methyl jasmonate esterase activity4.30E-03
78GO:0009044: xylan 1,4-beta-xylosidase activity4.30E-03
79GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen4.90E-03
80GO:0003993: acid phosphatase activity4.94E-03
81GO:0004372: glycine hydroxymethyltransferase activity5.52E-03
82GO:0016846: carbon-sulfur lyase activity5.52E-03
83GO:0004366: glycerol-3-phosphate O-acyltransferase activity6.85E-03
84GO:0042578: phosphoric ester hydrolase activity6.85E-03
85GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity6.85E-03
86GO:0000210: NAD+ diphosphatase activity6.85E-03
87GO:0016208: AMP binding6.85E-03
88GO:0052689: carboxylic ester hydrolase activity7.15E-03
89GO:0003730: mRNA 3'-UTR binding8.28E-03
90GO:0004144: diacylglycerol O-acyltransferase activity8.28E-03
91GO:0004723: calcium-dependent protein serine/threonine phosphatase activity8.28E-03
92GO:0005261: cation channel activity8.28E-03
93GO:0009927: histidine phosphotransfer kinase activity8.28E-03
94GO:0004124: cysteine synthase activity8.28E-03
95GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity8.28E-03
96GO:0016832: aldehyde-lyase activity8.28E-03
97GO:0010181: FMN binding9.01E-03
98GO:0043022: ribosome binding1.14E-02
99GO:0016791: phosphatase activity1.26E-02
100GO:0008173: RNA methyltransferase activity1.32E-02
101GO:0003747: translation release factor activity1.50E-02
102GO:0005381: iron ion transmembrane transporter activity1.68E-02
103GO:0008236: serine-type peptidase activity1.87E-02
104GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds1.91E-02
105GO:0016829: lyase activity2.19E-02
106GO:0050897: cobalt ion binding2.28E-02
107GO:0016757: transferase activity, transferring glycosyl groups2.46E-02
108GO:0031072: heat shock protein binding2.52E-02
109GO:0000155: phosphorelay sensor kinase activity2.52E-02
110GO:0003725: double-stranded RNA binding2.52E-02
111GO:0000175: 3'-5'-exoribonuclease activity2.52E-02
112GO:0008081: phosphoric diester hydrolase activity2.52E-02
113GO:0008131: primary amine oxidase activity2.74E-02
114GO:0008083: growth factor activity2.74E-02
115GO:0004871: signal transducer activity2.89E-02
116GO:0008146: sulfotransferase activity2.97E-02
117GO:0003887: DNA-directed DNA polymerase activity3.21E-02
118GO:0003714: transcription corepressor activity3.46E-02
119GO:0005528: FK506 binding3.46E-02
120GO:0035091: phosphatidylinositol binding3.49E-02
121GO:0051537: 2 iron, 2 sulfur cluster binding3.49E-02
122GO:0051087: chaperone binding3.71E-02
123GO:0015079: potassium ion transmembrane transporter activity3.71E-02
124GO:0019706: protein-cysteine S-palmitoyltransferase activity3.97E-02
125GO:0008408: 3'-5' exonuclease activity3.97E-02
126GO:0005506: iron ion binding4.10E-02
127GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity4.23E-02
128GO:0016760: cellulose synthase (UDP-forming) activity4.50E-02
<
Gene type



Gene DE type