Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G09860

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0015717: triose phosphate transport0.00E+00
2GO:1901918: negative regulation of exoribonuclease activity0.00E+00
3GO:0033231: carbohydrate export0.00E+00
4GO:0005996: monosaccharide metabolic process0.00E+00
5GO:0009704: de-etiolation1.93E-05
6GO:0055114: oxidation-reduction process3.20E-05
7GO:0051775: response to redox state5.03E-05
8GO:0071277: cellular response to calcium ion5.03E-05
9GO:0046467: membrane lipid biosynthetic process5.03E-05
10GO:1904966: positive regulation of vitamin E biosynthetic process5.03E-05
11GO:1904964: positive regulation of phytol biosynthetic process5.03E-05
12GO:0042371: vitamin K biosynthetic process5.03E-05
13GO:0019510: S-adenosylhomocysteine catabolic process5.03E-05
14GO:1902334: fructose export from vacuole to cytoplasm5.03E-05
15GO:0015755: fructose transport5.03E-05
16GO:0019253: reductive pentose-phosphate cycle8.62E-05
17GO:0015979: photosynthesis9.99E-05
18GO:0006636: unsaturated fatty acid biosynthetic process1.11E-04
19GO:0033353: S-adenosylmethionine cycle1.23E-04
20GO:0030388: fructose 1,6-bisphosphate metabolic process1.23E-04
21GO:1902326: positive regulation of chlorophyll biosynthetic process1.23E-04
22GO:0035436: triose phosphate transmembrane transport2.11E-04
23GO:0006000: fructose metabolic process2.11E-04
24GO:0071484: cellular response to light intensity3.09E-04
25GO:0006107: oxaloacetate metabolic process3.09E-04
26GO:0007623: circadian rhythm3.35E-04
27GO:0015713: phosphoglycerate transport4.15E-04
28GO:0006546: glycine catabolic process4.15E-04
29GO:0006734: NADH metabolic process4.15E-04
30GO:0009765: photosynthesis, light harvesting4.15E-04
31GO:0045727: positive regulation of translation4.15E-04
32GO:0010600: regulation of auxin biosynthetic process4.15E-04
33GO:1902456: regulation of stomatal opening6.44E-04
34GO:0009643: photosynthetic acclimation6.44E-04
35GO:0010244: response to low fluence blue light stimulus by blue low-fluence system7.68E-04
36GO:0034599: cellular response to oxidative stress7.89E-04
37GO:0010161: red light signaling pathway8.97E-04
38GO:0009772: photosynthetic electron transport in photosystem II8.97E-04
39GO:1900056: negative regulation of leaf senescence8.97E-04
40GO:0010928: regulation of auxin mediated signaling pathway1.03E-03
41GO:0008610: lipid biosynthetic process1.03E-03
42GO:0005978: glycogen biosynthetic process1.03E-03
43GO:0032544: plastid translation1.17E-03
44GO:0032259: methylation1.17E-03
45GO:2000031: regulation of salicylic acid mediated signaling pathway1.17E-03
46GO:0009932: cell tip growth1.17E-03
47GO:0006002: fructose 6-phosphate metabolic process1.17E-03
48GO:0009657: plastid organization1.17E-03
49GO:0010206: photosystem II repair1.32E-03
50GO:0090333: regulation of stomatal closure1.32E-03
51GO:0010205: photoinhibition1.47E-03
52GO:0009098: leucine biosynthetic process1.47E-03
53GO:0010380: regulation of chlorophyll biosynthetic process1.47E-03
54GO:0006995: cellular response to nitrogen starvation1.63E-03
55GO:0019684: photosynthesis, light reaction1.79E-03
56GO:0000272: polysaccharide catabolic process1.79E-03
57GO:0009750: response to fructose1.79E-03
58GO:0018119: peptidyl-cysteine S-nitrosylation1.79E-03
59GO:0009773: photosynthetic electron transport in photosystem I1.79E-03
60GO:0009409: response to cold1.84E-03
61GO:0016925: protein sumoylation1.96E-03
62GO:0002213: defense response to insect1.96E-03
63GO:0006108: malate metabolic process2.14E-03
64GO:0006006: glucose metabolic process2.14E-03
65GO:0018107: peptidyl-threonine phosphorylation2.14E-03
66GO:0006094: gluconeogenesis2.14E-03
67GO:0005986: sucrose biosynthetic process2.14E-03
68GO:0010207: photosystem II assembly2.32E-03
69GO:0005985: sucrose metabolic process2.50E-03
70GO:0019762: glucosinolate catabolic process2.69E-03
71GO:0009695: jasmonic acid biosynthetic process3.08E-03
72GO:0031408: oxylipin biosynthetic process3.29E-03
73GO:0051260: protein homooligomerization3.29E-03
74GO:0061077: chaperone-mediated protein folding3.29E-03
75GO:0006730: one-carbon metabolic process3.50E-03
76GO:2000022: regulation of jasmonic acid mediated signaling pathway3.50E-03
77GO:0030245: cellulose catabolic process3.50E-03
78GO:0010017: red or far-red light signaling pathway3.50E-03
79GO:0070417: cellular response to cold4.15E-03
80GO:0042631: cellular response to water deprivation4.37E-03
81GO:0006662: glycerol ether metabolic process4.60E-03
82GO:0009658: chloroplast organization4.73E-03
83GO:0009646: response to absence of light4.83E-03
84GO:0019252: starch biosynthetic process5.07E-03
85GO:0042742: defense response to bacterium6.18E-03
86GO:0044550: secondary metabolite biosynthetic process6.36E-03
87GO:0051607: defense response to virus6.59E-03
88GO:0010411: xyloglucan metabolic process7.68E-03
89GO:0015995: chlorophyll biosynthetic process7.68E-03
90GO:0018298: protein-chromophore linkage8.24E-03
91GO:0006499: N-terminal protein myristoylation8.82E-03
92GO:0009910: negative regulation of flower development9.12E-03
93GO:0006099: tricarboxylic acid cycle1.00E-02
94GO:0006631: fatty acid metabolic process1.10E-02
95GO:0010114: response to red light1.16E-02
96GO:0009744: response to sucrose1.16E-02
97GO:0042546: cell wall biogenesis1.20E-02
98GO:0006364: rRNA processing1.44E-02
99GO:0009585: red, far-red light phototransduction1.44E-02
100GO:0006417: regulation of translation1.54E-02
101GO:0006096: glycolytic process1.62E-02
102GO:0045893: positive regulation of transcription, DNA-templated1.77E-02
103GO:0018105: peptidyl-serine phosphorylation1.88E-02
104GO:0006396: RNA processing1.88E-02
105GO:0055085: transmembrane transport1.95E-02
106GO:0006633: fatty acid biosynthetic process2.54E-02
107GO:0010468: regulation of gene expression3.08E-02
108GO:0071555: cell wall organization3.12E-02
109GO:0046777: protein autophosphorylation4.54E-02
110GO:0046686: response to cadmium ion4.83E-02
111GO:0045454: cell redox homeostasis4.91E-02
RankGO TermAdjusted P value
1GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity0.00E+00
2GO:0008807: carboxyvinyl-carboxyphosphonate phosphorylmutase activity0.00E+00
3GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity0.00E+00
4GO:0004768: stearoyl-CoA 9-desaturase activity0.00E+00
5GO:0015284: fructose uniporter activity0.00E+00
6GO:0035798: 2-alkenal reductase (NADP+) activity0.00E+00
7GO:0030794: (S)-coclaurine-N-methyltransferase activity0.00E+00
8GO:0046554: malate dehydrogenase (NADP+) activity0.00E+00
9GO:0008746: NAD(P)+ transhydrogenase activity5.03E-05
10GO:0035671: enone reductase activity5.03E-05
11GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity5.03E-05
12GO:0004013: adenosylhomocysteinase activity5.03E-05
13GO:0051287: NAD binding8.19E-05
14GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity1.23E-04
15GO:0018708: thiol S-methyltransferase activity1.23E-04
16GO:0005353: fructose transmembrane transporter activity1.23E-04
17GO:0003862: 3-isopropylmalate dehydrogenase activity1.23E-04
18GO:0010297: heteropolysaccharide binding1.23E-04
19GO:0004047: aminomethyltransferase activity1.23E-04
20GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity1.23E-04
21GO:0071917: triose-phosphate transmembrane transporter activity2.11E-04
22GO:0019948: SUMO activating enzyme activity2.11E-04
23GO:0010277: chlorophyllide a oxygenase [overall] activity2.11E-04
24GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity3.09E-04
25GO:0008878: glucose-1-phosphate adenylyltransferase activity4.15E-04
26GO:0015120: phosphoglycerate transmembrane transporter activity4.15E-04
27GO:0043495: protein anchor4.15E-04
28GO:0045300: acyl-[acyl-carrier-protein] desaturase activity5.26E-04
29GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen5.26E-04
30GO:0008168: methyltransferase activity5.57E-04
31GO:0016615: malate dehydrogenase activity6.44E-04
32GO:0030060: L-malate dehydrogenase activity7.68E-04
33GO:0019899: enzyme binding8.97E-04
34GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water1.17E-03
35GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity1.47E-03
36GO:0031072: heat shock protein binding2.14E-03
37GO:0051119: sugar transmembrane transporter activity2.50E-03
38GO:0005528: FK506 binding2.88E-03
39GO:0008810: cellulase activity3.71E-03
40GO:0022891: substrate-specific transmembrane transporter activity3.71E-03
41GO:0003727: single-stranded RNA binding3.93E-03
42GO:0047134: protein-disulfide reductase activity4.15E-03
43GO:0050662: coenzyme binding4.83E-03
44GO:0004791: thioredoxin-disulfide reductase activity4.83E-03
45GO:0016762: xyloglucan:xyloglucosyl transferase activity5.32E-03
46GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor5.81E-03
47GO:0005506: iron ion binding6.06E-03
48GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity6.33E-03
49GO:0008483: transaminase activity6.33E-03
50GO:0016722: oxidoreductase activity, oxidizing metal ions6.33E-03
51GO:0005515: protein binding7.00E-03
52GO:0016168: chlorophyll binding7.12E-03
53GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen7.56E-03
54GO:0016798: hydrolase activity, acting on glycosyl bonds7.68E-03
55GO:0008757: S-adenosylmethionine-dependent methyltransferase activity7.96E-03
56GO:0003746: translation elongation factor activity9.73E-03
57GO:0050661: NADP binding1.07E-02
58GO:0051537: 2 iron, 2 sulfur cluster binding1.23E-02
59GO:0043621: protein self-association1.23E-02
60GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.30E-02
61GO:0016874: ligase activity1.77E-02
62GO:0051082: unfolded protein binding1.84E-02
63GO:0015035: protein disulfide oxidoreductase activity1.88E-02
64GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds2.03E-02
65GO:0019843: rRNA binding2.16E-02
66GO:0019825: oxygen binding2.19E-02
67GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen2.20E-02
68GO:0015297: antiporter activity2.63E-02
69GO:0042626: ATPase activity, coupled to transmembrane movement of substances3.23E-02
70GO:0042802: identical protein binding3.23E-02
71GO:0000287: magnesium ion binding3.66E-02
72GO:0016788: hydrolase activity, acting on ester bonds3.76E-02
73GO:0016491: oxidoreductase activity4.09E-02
74GO:0052689: carboxylic ester hydrolase activity4.64E-02
75GO:0020037: heme binding4.89E-02
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Gene type



Gene DE type