co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G09660

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1901401: regulation of tetrapyrrole metabolic process	0.00E+00
2	GO:0061635: regulation of protein complex stability	0.00E+00
3	GO:0019265: glycine biosynthetic process, by transamination of glyoxylate	0.00E+00
4	GO:0015979: photosynthesis	4.55E-24
5	GO:0009768: photosynthesis, light harvesting in photosystem I	7.91E-13
6	GO:0018298: protein-chromophore linkage	2.56E-10
7	GO:0090391: granum assembly	5.82E-09
8	GO:0010196: nonphotochemical quenching	5.94E-09
9	GO:0009773: photosynthetic electron transport in photosystem I	9.69E-08
10	GO:0009735: response to cytokinin	1.75E-07
11	GO:0015995: chlorophyll biosynthetic process	4.22E-07
12	GO:0009645: response to low light intensity stimulus	1.08E-06
13	GO:0032544: plastid translation	2.44E-06
14	GO:0010206: photosystem II repair	3.45E-06
15	GO:0010207: photosystem II assembly	1.61E-05
16	GO:0010218: response to far red light	2.07E-05
17	GO:0009637: response to blue light	2.75E-05
18	GO:0010114: response to red light	4.53E-05
19	GO:0009854: oxidative photosynthetic carbon pathway	6.84E-05
20	GO:0006662: glycerol ether metabolic process	8.31E-05
21	GO:0009642: response to light intensity	1.18E-04
22	GO:0043085: positive regulation of catalytic activity	2.97E-04
23	GO:0018119: peptidyl-cysteine S-nitrosylation	2.97E-04
24	GO:0010275: NAD(P)H dehydrogenase complex assembly	3.65E-04
25	GO:0034599: cellular response to oxidative stress	4.04E-04
26	GO:0019253: reductive pentose-phosphate cycle	4.38E-04
27	GO:0006810: transport	5.05E-04
28	GO:0006636: unsaturated fatty acid biosynthetic process	5.47E-04
29	GO:0009644: response to high light intensity	5.84E-04
30	GO:0006518: peptide metabolic process	5.97E-04
31	GO:0055114: oxidation-reduction process	7.49E-04
32	GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis	8.53E-04
33	GO:0071484: cellular response to light intensity	8.53E-04
34	GO:0043207: response to external biotic stimulus	8.53E-04
35	GO:0042631: cellular response to water deprivation	1.09E-03
36	GO:0006546: glycine catabolic process	1.13E-03
37	GO:0015976: carbon utilization	1.13E-03
38	GO:0019464: glycine decarboxylation via glycine cleavage system	1.13E-03
39	GO:0009765: photosynthesis, light harvesting	1.13E-03
40	GO:0006109: regulation of carbohydrate metabolic process	1.13E-03
41	GO:0006536: glutamate metabolic process	1.13E-03
42	GO:0010600: regulation of auxin biosynthetic process	1.13E-03
43	GO:0045454: cell redox homeostasis	1.31E-03
44	GO:0006461: protein complex assembly	1.43E-03
45	GO:0006656: phosphatidylcholine biosynthetic process	1.43E-03
46	GO:0043097: pyrimidine nucleoside salvage	1.43E-03
47	GO:0010190: cytochrome b6f complex assembly	1.76E-03
48	GO:0050665: hydrogen peroxide biosynthetic process	1.76E-03
49	GO:0006206: pyrimidine nucleobase metabolic process	1.76E-03
50	GO:0010027: thylakoid membrane organization	2.07E-03
51	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	2.11E-03
52	GO:1900057: positive regulation of leaf senescence	2.48E-03
53	GO:0009772: photosynthetic electron transport in photosystem II	2.48E-03
54	GO:0010928: regulation of auxin mediated signaling pathway	2.88E-03
55	GO:0071482: cellular response to light stimulus	3.29E-03
56	GO:0022900: electron transport chain	3.29E-03
57	GO:0009657: plastid organization	3.29E-03
58	GO:0009853: photorespiration	3.40E-03
59	GO:0006783: heme biosynthetic process	3.72E-03
60	GO:0009245: lipid A biosynthetic process	3.72E-03
61	GO:0009658: chloroplast organization	4.12E-03
62	GO:0010205: photoinhibition	4.17E-03
63	GO:0006779: porphyrin-containing compound biosynthetic process	4.17E-03
64	GO:0042761: very long-chain fatty acid biosynthetic process	4.17E-03
65	GO:0009416: response to light stimulus	4.32E-03
66	GO:0006782: protoporphyrinogen IX biosynthetic process	4.64E-03
67	GO:0009698: phenylpropanoid metabolic process	5.12E-03
68	GO:0080167: response to karrikin	5.41E-03
69	GO:0009409: response to cold	5.70E-03
70	GO:0006006: glucose metabolic process	6.14E-03
71	GO:0006094: gluconeogenesis	6.14E-03
72	GO:0009767: photosynthetic electron transport chain	6.14E-03
73	GO:0006807: nitrogen compound metabolic process	6.14E-03
74	GO:0009266: response to temperature stimulus	6.67E-03
75	GO:0010143: cutin biosynthetic process	6.67E-03
76	GO:0006096: glycolytic process	6.95E-03
77	GO:0043086: negative regulation of catalytic activity	6.95E-03
78	GO:0007031: peroxisome organization	7.22E-03
79	GO:0006412: translation	7.97E-03
80	GO:0031408: oxylipin biosynthetic process	9.59E-03
81	GO:0007005: mitochondrion organization	1.02E-02
82	GO:0019748: secondary metabolic process	1.02E-02
83	GO:0009693: ethylene biosynthetic process	1.09E-02
84	GO:0042742: defense response to bacterium	1.26E-02
85	GO:0000413: protein peptidyl-prolyl isomerization	1.29E-02
86	GO:0006606: protein import into nucleus	1.29E-02
87	GO:0042335: cuticle development	1.29E-02
88	GO:0006633: fatty acid biosynthetic process	1.32E-02
89	GO:0015986: ATP synthesis coupled proton transport	1.43E-02
90	GO:0006814: sodium ion transport	1.43E-02
91	GO:0019252: starch biosynthetic process	1.50E-02
92	GO:0008654: phospholipid biosynthetic process	1.50E-02
93	GO:0010193: response to ozone	1.58E-02
94	GO:0009627: systemic acquired resistance	2.22E-02
95	GO:0042254: ribosome biogenesis	2.29E-02
96	GO:0016311: dephosphorylation	2.39E-02
97	GO:0007568: aging	2.74E-02
98	GO:0009631: cold acclimation	2.74E-02
99	GO:0006865: amino acid transport	2.84E-02
100	GO:0006869: lipid transport	3.66E-02
101	GO:0032259: methylation	3.94E-02
102	GO:0006812: cation transport	4.12E-02
103	GO:0009585: red, far-red light phototransduction	4.34E-02
104	GO:0010224: response to UV-B	4.44E-02
105	GO:0009909: regulation of flower development	4.66E-02

Rank	GO Term	Adjusted P value
1	GO:0052667: phosphomethylethanolamine N-methyltransferase activity	0.00E+00
2	GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity	0.00E+00
3	GO:0008974: phosphoribulokinase activity	0.00E+00
4	GO:0015038: glutathione disulfide oxidoreductase activity	0.00E+00
5	GO:0008465: glycerate dehydrogenase activity	0.00E+00
6	GO:0046408: chlorophyll synthetase activity	0.00E+00
7	GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity	0.00E+00
8	GO:0050281: serine-glyoxylate transaminase activity	0.00E+00
9	GO:0030504: inorganic diphosphate transmembrane transporter activity	0.00E+00
10	GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity	0.00E+00
11	GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors	0.00E+00
12	GO:0004760: serine-pyruvate transaminase activity	0.00E+00
13	GO:0031409: pigment binding	3.32E-13
14	GO:0016168: chlorophyll binding	1.14E-10
15	GO:0047134: protein-disulfide reductase activity	6.58E-05
16	GO:0016491: oxidoreductase activity	8.43E-05
17	GO:0004791: thioredoxin-disulfide reductase activity	9.29E-05
18	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.38E-04
19	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	1.47E-04
20	GO:0015035: protein disulfide oxidoreductase activity	1.58E-04
21	GO:0009374: biotin binding	1.60E-04
22	GO:0030794: (S)-coclaurine-N-methyltransferase activity	1.60E-04
23	GO:0008047: enzyme activator activity	2.55E-04
24	GO:0016630: protochlorophyllide reductase activity	3.65E-04
25	GO:0000234: phosphoethanolamine N-methyltransferase activity	3.65E-04
26	GO:0008883: glutamyl-tRNA reductase activity	3.65E-04
27	GO:0016868: intramolecular transferase activity, phosphotransferases	3.65E-04
28	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	3.65E-04
29	GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity	3.65E-04
30	GO:0051537: 2 iron, 2 sulfur cluster binding	5.84E-04
31	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	5.97E-04
32	GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity	8.53E-04
33	GO:0004351: glutamate decarboxylase activity	8.53E-04
34	GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity	8.53E-04
35	GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity	8.53E-04
36	GO:0004375: glycine dehydrogenase (decarboxylating) activity	8.53E-04
37	GO:0016851: magnesium chelatase activity	8.53E-04
38	GO:0003735: structural constituent of ribosome	9.85E-04
39	GO:0009011: starch synthase activity	1.13E-03
40	GO:0008891: glycolate oxidase activity	1.13E-03
41	GO:0008453: alanine-glyoxylate transaminase activity	1.13E-03
42	GO:0052793: pectin acetylesterase activity	1.13E-03
43	GO:0003989: acetyl-CoA carboxylase activity	1.43E-03
44	GO:0048038: quinone binding	1.44E-03
45	GO:0019843: rRNA binding	1.57E-03
46	GO:0016791: phosphatase activity	1.74E-03
47	GO:0031177: phosphopantetheine binding	1.76E-03
48	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	1.76E-03
49	GO:0004332: fructose-bisphosphate aldolase activity	1.76E-03
50	GO:0009055: electron carrier activity	2.01E-03
51	GO:0004849: uridine kinase activity	2.11E-03
52	GO:0000035: acyl binding	2.11E-03
53	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	2.88E-03
54	GO:0003993: acid phosphatase activity	3.55E-03
55	GO:0050661: NADP binding	3.86E-03
56	GO:0004185: serine-type carboxypeptidase activity	4.37E-03
57	GO:0051287: NAD binding	5.28E-03
58	GO:0005515: protein binding	5.44E-03
59	GO:0005315: inorganic phosphate transmembrane transporter activity	6.14E-03
60	GO:0004089: carbonate dehydratase activity	6.14E-03
61	GO:0031072: heat shock protein binding	6.14E-03
62	GO:0008266: poly(U) RNA binding	6.67E-03
63	GO:0004857: enzyme inhibitor activity	8.38E-03
64	GO:0051087: chaperone binding	8.97E-03
65	GO:0043424: protein histidine kinase binding	8.97E-03
66	GO:0008514: organic anion transmembrane transporter activity	1.15E-02
67	GO:0003756: protein disulfide isomerase activity	1.15E-02
68	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	1.36E-02
69	GO:0010181: FMN binding	1.43E-02
70	GO:0046872: metal ion binding	1.44E-02
71	GO:0042802: identical protein binding	1.85E-02
72	GO:0004721: phosphoprotein phosphatase activity	2.30E-02
73	GO:0004222: metalloendopeptidase activity	2.65E-02
74	GO:0030145: manganese ion binding	2.74E-02
75	GO:0042803: protein homodimerization activity	3.50E-02
76	GO:0015293: symporter activity	3.81E-02
77	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.91E-02
78	GO:0015171: amino acid transmembrane transporter activity	4.66E-02
79	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	4.99E-02