GO Enrichment Analysis of Co-expressed Genes with
AT5G09410
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0051958: methotrexate transport | 0.00E+00 |
| 2 | GO:0071028: nuclear mRNA surveillance | 3.64E-05 |
| 3 | GO:0043266: regulation of potassium ion transport | 3.64E-05 |
| 4 | GO:2000021: regulation of ion homeostasis | 3.64E-05 |
| 5 | GO:0006177: GMP biosynthetic process | 3.64E-05 |
| 6 | GO:0071051: polyadenylation-dependent snoRNA 3'-end processing | 9.09E-05 |
| 7 | GO:0034475: U4 snRNA 3'-end processing | 9.09E-05 |
| 8 | GO:0080005: photosystem stoichiometry adjustment | 9.09E-05 |
| 9 | GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation | 9.09E-05 |
| 10 | GO:0031125: rRNA 3'-end processing | 9.09E-05 |
| 11 | GO:0016075: rRNA catabolic process | 1.58E-04 |
| 12 | GO:0034427: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' | 1.58E-04 |
| 13 | GO:0030261: chromosome condensation | 1.58E-04 |
| 14 | GO:0046653: tetrahydrofolate metabolic process | 2.33E-04 |
| 15 | GO:0010107: potassium ion import | 3.14E-04 |
| 16 | GO:0015846: polyamine transport | 3.14E-04 |
| 17 | GO:0009902: chloroplast relocation | 3.14E-04 |
| 18 | GO:0098719: sodium ion import across plasma membrane | 4.01E-04 |
| 19 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 4.92E-04 |
| 20 | GO:0006655: phosphatidylglycerol biosynthetic process | 4.92E-04 |
| 21 | GO:0009635: response to herbicide | 4.92E-04 |
| 22 | GO:0010405: arabinogalactan protein metabolic process | 4.92E-04 |
| 23 | GO:0042372: phylloquinone biosynthetic process | 5.88E-04 |
| 24 | GO:0009082: branched-chain amino acid biosynthetic process | 5.88E-04 |
| 25 | GO:0009099: valine biosynthetic process | 5.88E-04 |
| 26 | GO:0006400: tRNA modification | 6.87E-04 |
| 27 | GO:0009704: de-etiolation | 7.90E-04 |
| 28 | GO:0055075: potassium ion homeostasis | 7.90E-04 |
| 29 | GO:0009097: isoleucine biosynthetic process | 8.97E-04 |
| 30 | GO:0010206: photosystem II repair | 1.01E-03 |
| 31 | GO:0090333: regulation of stomatal closure | 1.01E-03 |
| 32 | GO:0042761: very long-chain fatty acid biosynthetic process | 1.12E-03 |
| 33 | GO:0051453: regulation of intracellular pH | 1.12E-03 |
| 34 | GO:1903507: negative regulation of nucleic acid-templated transcription | 1.36E-03 |
| 35 | GO:0018119: peptidyl-cysteine S-nitrosylation | 1.36E-03 |
| 36 | GO:0016024: CDP-diacylglycerol biosynthetic process | 1.49E-03 |
| 37 | GO:0090351: seedling development | 1.89E-03 |
| 38 | GO:0010030: positive regulation of seed germination | 1.89E-03 |
| 39 | GO:0010025: wax biosynthetic process | 2.04E-03 |
| 40 | GO:0080147: root hair cell development | 2.18E-03 |
| 41 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 2.64E-03 |
| 42 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 3.13E-03 |
| 43 | GO:0042631: cellular response to water deprivation | 3.30E-03 |
| 44 | GO:0006885: regulation of pH | 3.47E-03 |
| 45 | GO:0006814: sodium ion transport | 3.64E-03 |
| 46 | GO:0030163: protein catabolic process | 4.37E-03 |
| 47 | GO:0016126: sterol biosynthetic process | 5.15E-03 |
| 48 | GO:0009735: response to cytokinin | 9.23E-03 |
| 49 | GO:0031347: regulation of defense response | 9.93E-03 |
| 50 | GO:0042538: hyperosmotic salinity response | 1.02E-02 |
| 51 | GO:0006417: regulation of translation | 1.15E-02 |
| 52 | GO:0006396: RNA processing | 1.40E-02 |
| 53 | GO:0009845: seed germination | 1.70E-02 |
| 54 | GO:0006470: protein dephosphorylation | 2.23E-02 |
| 55 | GO:0010468: regulation of gene expression | 2.29E-02 |
| 56 | GO:0009658: chloroplast organization | 2.76E-02 |
| 57 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 3.30E-02 |
| 58 | GO:0046777: protein autophosphorylation | 3.38E-02 |
| 59 | GO:0044550: secondary metabolite biosynthetic process | 3.42E-02 |
| 60 | GO:0009793: embryo development ending in seed dormancy | 4.73E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015231: 5-formyltetrahydrofolate transporter activity | 0.00E+00 |
| 2 | GO:0008115: sarcosine oxidase activity | 0.00E+00 |
| 3 | GO:0019808: polyamine binding | 0.00E+00 |
| 4 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
| 5 | GO:0015350: methotrexate transporter activity | 0.00E+00 |
| 6 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 3.64E-05 |
| 7 | GO:0003984: acetolactate synthase activity | 3.64E-05 |
| 8 | GO:0008517: folic acid transporter activity | 9.09E-05 |
| 9 | GO:0003938: IMP dehydrogenase activity | 9.09E-05 |
| 10 | GO:0000254: C-4 methylsterol oxidase activity | 2.33E-04 |
| 11 | GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity | 3.14E-04 |
| 12 | GO:0004737: pyruvate decarboxylase activity | 3.14E-04 |
| 13 | GO:0004040: amidase activity | 4.01E-04 |
| 14 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 4.92E-04 |
| 15 | GO:0016208: AMP binding | 4.92E-04 |
| 16 | GO:0015081: sodium ion transmembrane transporter activity | 4.92E-04 |
| 17 | GO:0030976: thiamine pyrophosphate binding | 4.92E-04 |
| 18 | GO:0016832: aldehyde-lyase activity | 5.88E-04 |
| 19 | GO:0015386: potassium:proton antiporter activity | 1.36E-03 |
| 20 | GO:0008559: xenobiotic-transporting ATPase activity | 1.36E-03 |
| 21 | GO:0000175: 3'-5'-exoribonuclease activity | 1.62E-03 |
| 22 | GO:0004252: serine-type endopeptidase activity | 1.65E-03 |
| 23 | GO:0003714: transcription corepressor activity | 2.18E-03 |
| 24 | GO:0008408: 3'-5' exonuclease activity | 2.48E-03 |
| 25 | GO:0008536: Ran GTPase binding | 3.47E-03 |
| 26 | GO:0050660: flavin adenine dinucleotide binding | 3.61E-03 |
| 27 | GO:0015385: sodium:proton antiporter activity | 4.37E-03 |
| 28 | GO:0004721: phosphoprotein phosphatase activity | 5.76E-03 |
| 29 | GO:0008236: serine-type peptidase activity | 5.97E-03 |
| 30 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 6.83E-03 |
| 31 | GO:0051539: 4 iron, 4 sulfur cluster binding | 7.97E-03 |
| 32 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 9.68E-03 |
| 33 | GO:0016740: transferase activity | 1.23E-02 |
| 34 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 1.23E-02 |
| 35 | GO:0016746: transferase activity, transferring acyl groups | 1.40E-02 |
| 36 | GO:0016758: transferase activity, transferring hexosyl groups | 1.58E-02 |
| 37 | GO:0016757: transferase activity, transferring glycosyl groups | 1.71E-02 |
| 38 | GO:0005506: iron ion binding | 2.02E-02 |
| 39 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 2.40E-02 |
| 40 | GO:0000287: magnesium ion binding | 2.72E-02 |
| 41 | GO:0003682: chromatin binding | 2.87E-02 |
| 42 | GO:0052689: carboxylic ester hydrolase activity | 3.46E-02 |
| 43 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 3.86E-02 |
| 44 | GO:0004722: protein serine/threonine phosphatase activity | 3.91E-02 |
| 45 | GO:0003723: RNA binding | 4.81E-02 |