Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G09320

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0015843: methylammonium transport0.00E+00
2GO:0031222: arabinan catabolic process0.00E+00
3GO:0070979: protein K11-linked ubiquitination0.00E+00
4GO:0061157: mRNA destabilization0.00E+00
5GO:0010422: regulation of brassinosteroid biosynthetic process0.00E+00
6GO:0018131: oxazole or thiazole biosynthetic process0.00E+00
7GO:0009157: deoxyribonucleoside monophosphate biosynthetic process0.00E+00
8GO:1903224: regulation of endodermal cell differentiation0.00E+00
9GO:0007638: mechanosensory behavior0.00E+00
10GO:0006003: fructose 2,6-bisphosphate metabolic process0.00E+00
11GO:0097164: ammonium ion metabolic process0.00E+00
12GO:0045184: establishment of protein localization0.00E+00
13GO:0006399: tRNA metabolic process0.00E+00
14GO:0046620: regulation of organ growth4.55E-09
15GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway5.36E-06
16GO:0040008: regulation of growth2.92E-05
17GO:0009926: auxin polar transport1.09E-04
18GO:0009658: chloroplast organization1.16E-04
19GO:0042793: transcription from plastid promoter2.98E-04
20GO:0000160: phosphorelay signal transduction system3.73E-04
21GO:0009733: response to auxin4.89E-04
22GO:0034757: negative regulation of iron ion transport4.98E-04
23GO:0006427: histidyl-tRNA aminoacylation4.98E-04
24GO:0042659: regulation of cell fate specification4.98E-04
25GO:0070509: calcium ion import4.98E-04
26GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic4.98E-04
27GO:0090558: plant epidermis development4.98E-04
28GO:0010480: microsporocyte differentiation4.98E-04
29GO:0035987: endodermal cell differentiation4.98E-04
30GO:0043609: regulation of carbon utilization4.98E-04
31GO:0006436: tryptophanyl-tRNA aminoacylation4.98E-04
32GO:0000066: mitochondrial ornithine transport4.98E-04
33GO:0006002: fructose 6-phosphate metabolic process7.77E-04
34GO:0000373: Group II intron splicing9.28E-04
35GO:2000123: positive regulation of stomatal complex development1.07E-03
36GO:0060359: response to ammonium ion1.07E-03
37GO:0070981: L-asparagine biosynthetic process1.07E-03
38GO:0010271: regulation of chlorophyll catabolic process1.07E-03
39GO:0071497: cellular response to freezing1.07E-03
40GO:0009662: etioplast organization1.07E-03
41GO:0042325: regulation of phosphorylation1.07E-03
42GO:0006529: asparagine biosynthetic process1.07E-03
43GO:0009638: phototropism1.09E-03
44GO:0009734: auxin-activated signaling pathway1.09E-03
45GO:0009736: cytokinin-activated signaling pathway1.17E-03
46GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic1.75E-03
47GO:0090708: specification of plant organ axis polarity1.75E-03
48GO:0080117: secondary growth1.75E-03
49GO:0006000: fructose metabolic process1.75E-03
50GO:0031145: anaphase-promoting complex-dependent catabolic process1.75E-03
51GO:0042780: tRNA 3'-end processing1.75E-03
52GO:0001578: microtubule bundle formation1.75E-03
53GO:0043157: response to cation stress1.75E-03
54GO:0009767: photosynthetic electron transport chain1.92E-03
55GO:0010411: xyloglucan metabolic process1.98E-03
56GO:0009742: brassinosteroid mediated signaling pathway2.19E-03
57GO:0070588: calcium ion transmembrane transport2.42E-03
58GO:0006468: protein phosphorylation2.51E-03
59GO:1902476: chloride transmembrane transport2.54E-03
60GO:0007231: osmosensory signaling pathway2.54E-03
61GO:0030071: regulation of mitotic metaphase/anaphase transition2.54E-03
62GO:0051639: actin filament network formation2.54E-03
63GO:0044211: CTP salvage2.54E-03
64GO:0019048: modulation by virus of host morphology or physiology2.54E-03
65GO:0015696: ammonium transport2.54E-03
66GO:0046739: transport of virus in multicellular host2.54E-03
67GO:2000904: regulation of starch metabolic process2.54E-03
68GO:0051289: protein homotetramerization2.54E-03
69GO:0031048: chromatin silencing by small RNA2.54E-03
70GO:0043572: plastid fission2.54E-03
71GO:2001141: regulation of RNA biosynthetic process2.54E-03
72GO:0005992: trehalose biosynthetic process3.00E-03
73GO:0051764: actin crosslink formation3.42E-03
74GO:0051322: anaphase3.42E-03
75GO:0030104: water homeostasis3.42E-03
76GO:0072488: ammonium transmembrane transport3.42E-03
77GO:0033500: carbohydrate homeostasis3.42E-03
78GO:2000038: regulation of stomatal complex development3.42E-03
79GO:0046656: folic acid biosynthetic process3.42E-03
80GO:0006021: inositol biosynthetic process3.42E-03
81GO:0051567: histone H3-K9 methylation3.42E-03
82GO:0044206: UMP salvage3.42E-03
83GO:0009165: nucleotide biosynthetic process3.42E-03
84GO:1901141: regulation of lignin biosynthetic process3.42E-03
85GO:0016998: cell wall macromolecule catabolic process3.64E-03
86GO:1902183: regulation of shoot apical meristem development4.38E-03
87GO:0016123: xanthophyll biosynthetic process4.38E-03
88GO:0032876: negative regulation of DNA endoreduplication4.38E-03
89GO:0010375: stomatal complex patterning4.38E-03
90GO:0016131: brassinosteroid metabolic process4.38E-03
91GO:0006544: glycine metabolic process4.38E-03
92GO:0042546: cell wall biogenesis4.45E-03
93GO:0009959: negative gravitropism5.43E-03
94GO:0006655: phosphatidylglycerol biosynthetic process5.43E-03
95GO:0006139: nucleobase-containing compound metabolic process5.43E-03
96GO:0048831: regulation of shoot system development5.43E-03
97GO:0045962: positive regulation of development, heterochronic5.43E-03
98GO:0006206: pyrimidine nucleobase metabolic process5.43E-03
99GO:0016458: gene silencing5.43E-03
100GO:0018258: protein O-linked glycosylation via hydroxyproline5.43E-03
101GO:0009228: thiamine biosynthetic process5.43E-03
102GO:0006563: L-serine metabolic process5.43E-03
103GO:0010405: arabinogalactan protein metabolic process5.43E-03
104GO:0010087: phloem or xylem histogenesis5.56E-03
105GO:0009646: response to absence of light6.45E-03
106GO:0080086: stamen filament development6.56E-03
107GO:2000067: regulation of root morphogenesis6.56E-03
108GO:0006458: 'de novo' protein folding6.56E-03
109GO:0042026: protein refolding6.56E-03
110GO:0009942: longitudinal axis specification6.56E-03
111GO:0048509: regulation of meristem development6.56E-03
112GO:0046654: tetrahydrofolate biosynthetic process6.56E-03
113GO:0030488: tRNA methylation6.56E-03
114GO:0009610: response to symbiotic fungus7.76E-03
115GO:0006955: immune response7.76E-03
116GO:0048528: post-embryonic root development7.76E-03
117GO:0006821: chloride transport7.76E-03
118GO:0048437: floral organ development7.76E-03
119GO:0010444: guard mother cell differentiation7.76E-03
120GO:0009396: folic acid-containing compound biosynthetic process7.76E-03
121GO:0032502: developmental process7.92E-03
122GO:0010252: auxin homeostasis9.00E-03
123GO:0048564: photosystem I assembly9.03E-03
124GO:0006402: mRNA catabolic process9.03E-03
125GO:0009787: regulation of abscisic acid-activated signaling pathway9.03E-03
126GO:0032875: regulation of DNA endoreduplication9.03E-03
127GO:0042255: ribosome assembly9.03E-03
128GO:0006353: DNA-templated transcription, termination9.03E-03
129GO:0055075: potassium ion homeostasis9.03E-03
130GO:0000105: histidine biosynthetic process9.03E-03
131GO:0051607: defense response to virus1.02E-02
132GO:0071482: cellular response to light stimulus1.04E-02
133GO:0009827: plant-type cell wall modification1.04E-02
134GO:0010497: plasmodesmata-mediated intercellular transport1.04E-02
135GO:0007389: pattern specification process1.04E-02
136GO:0010027: thylakoid membrane organization1.08E-02
137GO:0009051: pentose-phosphate shunt, oxidative branch1.18E-02
138GO:2000024: regulation of leaf development1.18E-02
139GO:0000902: cell morphogenesis1.18E-02
140GO:0080167: response to karrikin1.25E-02
141GO:0042761: very long-chain fatty acid biosynthetic process1.33E-02
142GO:0035999: tetrahydrofolate interconversion1.33E-02
143GO:2000280: regulation of root development1.33E-02
144GO:0031425: chloroplast RNA processing1.33E-02
145GO:0007275: multicellular organism development1.46E-02
146GO:0006949: syncytium formation1.48E-02
147GO:0009299: mRNA transcription1.48E-02
148GO:0006535: cysteine biosynthetic process from serine1.48E-02
149GO:0030422: production of siRNA involved in RNA interference1.48E-02
150GO:0045036: protein targeting to chloroplast1.48E-02
151GO:0009641: shade avoidance1.48E-02
152GO:0010015: root morphogenesis1.64E-02
153GO:0006816: calcium ion transport1.64E-02
154GO:0009773: photosynthetic electron transport in photosystem I1.64E-02
155GO:0006352: DNA-templated transcription, initiation1.64E-02
156GO:0048229: gametophyte development1.64E-02
157GO:0006865: amino acid transport1.71E-02
158GO:0006790: sulfur compound metabolic process1.81E-02
159GO:0016024: CDP-diacylglycerol biosynthetic process1.81E-02
160GO:0009725: response to hormone1.98E-02
161GO:2000012: regulation of auxin polar transport1.98E-02
162GO:0010628: positive regulation of gene expression1.98E-02
163GO:0006006: glucose metabolic process1.98E-02
164GO:0009785: blue light signaling pathway1.98E-02
165GO:0050826: response to freezing1.98E-02
166GO:0010075: regulation of meristem growth1.98E-02
167GO:0006839: mitochondrial transport2.04E-02
168GO:0009934: regulation of meristem structural organization2.16E-02
169GO:0010207: photosystem II assembly2.16E-02
170GO:0006541: glutamine metabolic process2.16E-02
171GO:0010020: chloroplast fission2.16E-02
172GO:0009739: response to gibberellin2.25E-02
173GO:0010114: response to red light2.31E-02
174GO:0007166: cell surface receptor signaling pathway2.31E-02
175GO:0090351: seedling development2.34E-02
176GO:0046854: phosphatidylinositol phosphorylation2.34E-02
177GO:0016310: phosphorylation2.41E-02
178GO:0006071: glycerol metabolic process2.53E-02
179GO:0006833: water transport2.53E-02
180GO:0006855: drug transmembrane transport2.70E-02
181GO:0019344: cysteine biosynthetic process2.72E-02
182GO:0009944: polarity specification of adaxial/abaxial axis2.72E-02
183GO:0000027: ribosomal large subunit assembly2.72E-02
184GO:0051017: actin filament bundle assembly2.72E-02
185GO:0051302: regulation of cell division2.92E-02
186GO:0006418: tRNA aminoacylation for protein translation2.92E-02
187GO:0006825: copper ion transport2.92E-02
188GO:0061077: chaperone-mediated protein folding3.13E-02
189GO:0006306: DNA methylation3.13E-02
190GO:0009826: unidimensional cell growth3.22E-02
191GO:0051603: proteolysis involved in cellular protein catabolic process3.23E-02
192GO:0006730: one-carbon metabolic process3.33E-02
193GO:0007005: mitochondrion organization3.33E-02
194GO:0031348: negative regulation of defense response3.33E-02
195GO:0042254: ribosome biogenesis3.45E-02
196GO:0010082: regulation of root meristem growth3.55E-02
197GO:0071215: cellular response to abscisic acid stimulus3.55E-02
198GO:0006284: base-excision repair3.77E-02
199GO:0048316: seed development3.80E-02
200GO:0006508: proteolysis3.93E-02
201GO:0070417: cellular response to cold3.99E-02
202GO:0009723: response to ethylene4.04E-02
203GO:0009740: gibberellic acid mediated signaling pathway4.17E-02
204GO:0048653: anther development4.21E-02
205GO:0000226: microtubule cytoskeleton organization4.21E-02
206GO:0008033: tRNA processing4.21E-02
207GO:0006342: chromatin silencing4.44E-02
208GO:0009741: response to brassinosteroid4.44E-02
209GO:0048544: recognition of pollen4.68E-02
210GO:0007018: microtubule-based movement4.68E-02
211GO:0008654: phospholipid biosynthetic process4.91E-02
RankGO TermAdjusted P value
1GO:0070009: serine-type aminopeptidase activity0.00E+00
2GO:0052834: inositol monophosphate phosphatase activity0.00E+00
3GO:0019136: deoxynucleoside kinase activity0.00E+00
4GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity0.00E+00
5GO:0003873: 6-phosphofructo-2-kinase activity0.00E+00
6GO:0004401: histidinol-phosphatase activity0.00E+00
7GO:0004056: argininosuccinate lyase activity0.00E+00
8GO:0016773: phosphotransferase activity, alcohol group as acceptor2.11E-04
9GO:0050139: nicotinate-N-glucosyltransferase activity4.98E-04
10GO:0042834: peptidoglycan binding4.98E-04
11GO:0004821: histidine-tRNA ligase activity4.98E-04
12GO:0004156: dihydropteroate synthase activity4.98E-04
13GO:0003848: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity4.98E-04
14GO:0005290: L-histidine transmembrane transporter activity4.98E-04
15GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity4.98E-04
16GO:0004008: copper-exporting ATPase activity4.98E-04
17GO:0004071: aspartate-ammonia ligase activity4.98E-04
18GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity4.98E-04
19GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity4.98E-04
20GO:0004830: tryptophan-tRNA ligase activity4.98E-04
21GO:0010347: L-galactose-1-phosphate phosphatase activity4.98E-04
22GO:0016762: xyloglucan:xyloglucosyl transferase activity1.01E-03
23GO:0043425: bHLH transcription factor binding1.07E-03
24GO:0052832: inositol monophosphate 3-phosphatase activity1.07E-03
25GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity1.07E-03
26GO:0008934: inositol monophosphate 1-phosphatase activity1.07E-03
27GO:0052833: inositol monophosphate 4-phosphatase activity1.07E-03
28GO:0000064: L-ornithine transmembrane transporter activity1.07E-03
29GO:0009884: cytokinin receptor activity1.07E-03
30GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity1.07E-03
31GO:0050017: L-3-cyanoalanine synthase activity1.07E-03
32GO:0004674: protein serine/threonine kinase activity1.15E-03
33GO:0000156: phosphorelay response regulator activity1.18E-03
34GO:0004805: trehalose-phosphatase activity1.27E-03
35GO:0070180: large ribosomal subunit rRNA binding1.75E-03
36GO:0070330: aromatase activity1.75E-03
37GO:0017150: tRNA dihydrouridine synthase activity1.75E-03
38GO:0042781: 3'-tRNA processing endoribonuclease activity1.75E-03
39GO:0005034: osmosensor activity1.75E-03
40GO:0005262: calcium channel activity1.92E-03
41GO:0016798: hydrolase activity, acting on glycosyl bonds1.98E-03
42GO:0001872: (1->3)-beta-D-glucan binding2.54E-03
43GO:0015189: L-lysine transmembrane transporter activity2.54E-03
44GO:0015181: arginine transmembrane transporter activity2.54E-03
45GO:0035197: siRNA binding2.54E-03
46GO:0001053: plastid sigma factor activity3.42E-03
47GO:0004845: uracil phosphoribosyltransferase activity3.42E-03
48GO:0004345: glucose-6-phosphate dehydrogenase activity3.42E-03
49GO:0016987: sigma factor activity3.42E-03
50GO:0005253: anion channel activity3.42E-03
51GO:0046556: alpha-L-arabinofuranosidase activity3.42E-03
52GO:0008725: DNA-3-methyladenine glycosylase activity4.38E-03
53GO:0004372: glycine hydroxymethyltransferase activity4.38E-03
54GO:0005275: amine transmembrane transporter activity4.38E-03
55GO:0018685: alkane 1-monooxygenase activity4.38E-03
56GO:0003727: single-stranded RNA binding4.74E-03
57GO:2001070: starch binding5.43E-03
58GO:0004605: phosphatidate cytidylyltransferase activity5.43E-03
59GO:1990714: hydroxyproline O-galactosyltransferase activity5.43E-03
60GO:0008519: ammonium transmembrane transporter activity5.43E-03
61GO:0005247: voltage-gated chloride channel activity5.43E-03
62GO:0016301: kinase activity5.46E-03
63GO:0004124: cysteine synthase activity6.56E-03
64GO:0008195: phosphatidate phosphatase activity6.56E-03
65GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity6.56E-03
66GO:0004849: uridine kinase activity6.56E-03
67GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity6.56E-03
68GO:0004656: procollagen-proline 4-dioxygenase activity6.56E-03
69GO:0019900: kinase binding6.56E-03
70GO:0004672: protein kinase activity7.46E-03
71GO:0019899: enzyme binding7.76E-03
72GO:0003872: 6-phosphofructokinase activity7.76E-03
73GO:0005524: ATP binding9.47E-03
74GO:0008173: RNA methyltransferase activity1.04E-02
75GO:0005375: copper ion transmembrane transporter activity1.04E-02
76GO:0008889: glycerophosphodiester phosphodiesterase activity1.18E-02
77GO:0009672: auxin:proton symporter activity1.33E-02
78GO:0004713: protein tyrosine kinase activity1.48E-02
79GO:0015238: drug transmembrane transporter activity1.48E-02
80GO:0004673: protein histidine kinase activity1.48E-02
81GO:0003735: structural constituent of ribosome1.50E-02
82GO:0016614: oxidoreductase activity, acting on CH-OH group of donors1.63E-02
83GO:0044183: protein binding involved in protein folding1.64E-02
84GO:0005089: Rho guanyl-nucleotide exchange factor activity1.64E-02
85GO:0008327: methyl-CpG binding1.64E-02
86GO:0042803: protein homodimerization activity1.76E-02
87GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.79E-02
88GO:0004521: endoribonuclease activity1.81E-02
89GO:0019888: protein phosphatase regulator activity1.98E-02
90GO:0004022: alcohol dehydrogenase (NAD) activity1.98E-02
91GO:0010329: auxin efflux transmembrane transporter activity1.98E-02
92GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.98E-02
93GO:0004089: carbonate dehydratase activity1.98E-02
94GO:0031072: heat shock protein binding1.98E-02
95GO:0000155: phosphorelay sensor kinase activity1.98E-02
96GO:0008017: microtubule binding2.07E-02
97GO:0004185: serine-type carboxypeptidase activity2.31E-02
98GO:0009055: electron carrier activity2.49E-02
99GO:0043621: protein self-association2.50E-02
100GO:0042802: identical protein binding2.64E-02
101GO:0031418: L-ascorbic acid binding2.72E-02
102GO:0043424: protein histidine kinase binding2.92E-02
103GO:0005345: purine nucleobase transmembrane transporter activity2.92E-02
104GO:0030246: carbohydrate binding2.96E-02
105GO:0008408: 3'-5' exonuclease activity3.13E-02
106GO:0004176: ATP-dependent peptidase activity3.13E-02
107GO:0033612: receptor serine/threonine kinase binding3.13E-02
108GO:0003777: microtubule motor activity3.45E-02
109GO:0015171: amino acid transmembrane transporter activity3.45E-02
110GO:0008514: organic anion transmembrane transporter activity3.77E-02
111GO:0004812: aminoacyl-tRNA ligase activity3.99E-02
112GO:0050660: flavin adenine dinucleotide binding4.04E-02
113GO:0051082: unfolded protein binding4.42E-02
114GO:0004527: exonuclease activity4.44E-02
115GO:0050662: coenzyme binding4.68E-02
116GO:0019901: protein kinase binding4.91E-02
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Gene type



Gene DE type