Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G08660

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010647: positive regulation of cell communication0.00E+00
2GO:1902001: fatty acid transmembrane transport0.00E+00
3GO:0098755: maintenance of seed dormancy by absisic acid0.00E+00
4GO:0090359: negative regulation of abscisic acid biosynthetic process0.00E+00
5GO:0010273: detoxification of copper ion0.00E+00
6GO:0002764: immune response-regulating signaling pathway0.00E+00
7GO:0006983: ER overload response0.00E+00
8GO:0010324: membrane invagination0.00E+00
9GO:0032499: detection of peptidoglycan0.00E+00
10GO:0006182: cGMP biosynthetic process0.00E+00
11GO:0002752: cell surface pattern recognition receptor signaling pathway0.00E+00
12GO:0006468: protein phosphorylation1.13E-05
13GO:0060548: negative regulation of cell death5.93E-05
14GO:0042350: GDP-L-fucose biosynthetic process3.02E-04
15GO:0019567: arabinose biosynthetic process3.02E-04
16GO:0015969: guanosine tetraphosphate metabolic process3.02E-04
17GO:0099132: ATP hydrolysis coupled cation transmembrane transport3.02E-04
18GO:0009609: response to symbiotic bacterium3.02E-04
19GO:0033306: phytol metabolic process3.02E-04
20GO:0006643: membrane lipid metabolic process3.02E-04
21GO:1902065: response to L-glutamate3.02E-04
22GO:0032491: detection of molecule of fungal origin3.02E-04
23GO:0009617: response to bacterium3.82E-04
24GO:0010112: regulation of systemic acquired resistance4.52E-04
25GO:0009620: response to fungus5.63E-04
26GO:0080185: effector dependent induction by symbiont of host immune response6.60E-04
27GO:0080181: lateral root branching6.60E-04
28GO:0055088: lipid homeostasis6.60E-04
29GO:0015908: fatty acid transport6.60E-04
30GO:0044419: interspecies interaction between organisms6.60E-04
31GO:0031349: positive regulation of defense response6.60E-04
32GO:0010115: regulation of abscisic acid biosynthetic process6.60E-04
33GO:0051258: protein polymerization6.60E-04
34GO:0060919: auxin influx6.60E-04
35GO:0000719: photoreactive repair6.60E-04
36GO:0043066: negative regulation of apoptotic process6.60E-04
37GO:0010271: regulation of chlorophyll catabolic process6.60E-04
38GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine6.60E-04
39GO:0071668: plant-type cell wall assembly6.60E-04
40GO:0008219: cell death8.83E-04
41GO:0015695: organic cation transport1.07E-03
42GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway1.07E-03
43GO:0002230: positive regulation of defense response to virus by host1.07E-03
44GO:0080163: regulation of protein serine/threonine phosphatase activity1.07E-03
45GO:0006048: UDP-N-acetylglucosamine biosynthetic process1.07E-03
46GO:0016045: detection of bacterium1.07E-03
47GO:1900140: regulation of seedling development1.07E-03
48GO:0010359: regulation of anion channel activity1.07E-03
49GO:0042351: 'de novo' GDP-L-fucose biosynthetic process1.07E-03
50GO:0035556: intracellular signal transduction1.45E-03
51GO:0010150: leaf senescence1.47E-03
52GO:0043207: response to external biotic stimulus1.53E-03
53GO:0072334: UDP-galactose transmembrane transport1.53E-03
54GO:0030100: regulation of endocytosis1.53E-03
55GO:0072583: clathrin-dependent endocytosis1.53E-03
56GO:0009226: nucleotide-sugar biosynthetic process1.53E-03
57GO:0015696: ammonium transport1.53E-03
58GO:0048530: fruit morphogenesis1.53E-03
59GO:0071323: cellular response to chitin1.53E-03
60GO:1902290: positive regulation of defense response to oomycetes1.53E-03
61GO:0046713: borate transport1.53E-03
62GO:0007166: cell surface receptor signaling pathway1.81E-03
63GO:0071456: cellular response to hypoxia1.90E-03
64GO:0006952: defense response2.01E-03
65GO:0045227: capsule polysaccharide biosynthetic process2.06E-03
66GO:0006085: acetyl-CoA biosynthetic process2.06E-03
67GO:0072488: ammonium transmembrane transport2.06E-03
68GO:0033358: UDP-L-arabinose biosynthetic process2.06E-03
69GO:0022622: root system development2.06E-03
70GO:0071219: cellular response to molecule of bacterial origin2.06E-03
71GO:0034052: positive regulation of plant-type hypersensitive response2.63E-03
72GO:0009229: thiamine diphosphate biosynthetic process2.63E-03
73GO:0015031: protein transport2.76E-03
74GO:0007165: signal transduction2.84E-03
75GO:0009626: plant-type hypersensitive response3.20E-03
76GO:0010315: auxin efflux3.24E-03
77GO:0009228: thiamine biosynthetic process3.24E-03
78GO:0006574: valine catabolic process3.24E-03
79GO:0009749: response to glucose3.27E-03
80GO:2000067: regulation of root morphogenesis3.90E-03
81GO:0031930: mitochondria-nucleus signaling pathway3.90E-03
82GO:0048509: regulation of meristem development3.90E-03
83GO:0010199: organ boundary specification between lateral organs and the meristem3.90E-03
84GO:0010555: response to mannitol3.90E-03
85GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway4.20E-03
86GO:0010200: response to chitin4.20E-03
87GO:0016192: vesicle-mediated transport4.30E-03
88GO:0046777: protein autophosphorylation4.41E-03
89GO:0046470: phosphatidylcholine metabolic process4.60E-03
90GO:0043090: amino acid import4.60E-03
91GO:0015937: coenzyme A biosynthetic process4.60E-03
92GO:1900057: positive regulation of leaf senescence4.60E-03
93GO:0010044: response to aluminum ion4.60E-03
94GO:0009610: response to symbiotic fungus4.60E-03
95GO:0042742: defense response to bacterium5.28E-03
96GO:0009787: regulation of abscisic acid-activated signaling pathway5.35E-03
97GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline5.35E-03
98GO:0009819: drought recovery5.35E-03
99GO:0030162: regulation of proteolysis5.35E-03
100GO:1900150: regulation of defense response to fungus5.35E-03
101GO:0009816: defense response to bacterium, incompatible interaction5.35E-03
102GO:0006886: intracellular protein transport5.50E-03
103GO:0010208: pollen wall assembly6.13E-03
104GO:0007186: G-protein coupled receptor signaling pathway6.13E-03
105GO:0010497: plasmodesmata-mediated intercellular transport6.13E-03
106GO:0010204: defense response signaling pathway, resistance gene-independent6.13E-03
107GO:0009817: defense response to fungus, incompatible interaction6.61E-03
108GO:0006098: pentose-phosphate shunt6.95E-03
109GO:0019432: triglyceride biosynthetic process6.95E-03
110GO:0007568: aging7.65E-03
111GO:0010380: regulation of chlorophyll biosynthetic process7.80E-03
112GO:0010449: root meristem growth7.80E-03
113GO:0008202: steroid metabolic process7.80E-03
114GO:1900426: positive regulation of defense response to bacterium7.80E-03
115GO:0045087: innate immune response8.39E-03
116GO:0007064: mitotic sister chromatid cohesion8.70E-03
117GO:0043069: negative regulation of programmed cell death8.70E-03
118GO:0006470: protein dephosphorylation8.89E-03
119GO:0000038: very long-chain fatty acid metabolic process9.63E-03
120GO:0019684: photosynthesis, light reaction9.63E-03
121GO:0043085: positive regulation of catalytic activity9.63E-03
122GO:0009750: response to fructose9.63E-03
123GO:0006897: endocytosis9.98E-03
124GO:0045037: protein import into chloroplast stroma1.06E-02
125GO:0018107: peptidyl-threonine phosphorylation1.16E-02
126GO:0007034: vacuolar transport1.26E-02
127GO:0010540: basipetal auxin transport1.26E-02
128GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.31E-02
129GO:0009225: nucleotide-sugar metabolic process1.37E-02
130GO:0010167: response to nitrate1.37E-02
131GO:0046688: response to copper ion1.37E-02
132GO:0070588: calcium ion transmembrane transport1.37E-02
133GO:0010053: root epidermal cell differentiation1.37E-02
134GO:0009863: salicylic acid mediated signaling pathway1.59E-02
135GO:0080147: root hair cell development1.59E-02
136GO:2000377: regulation of reactive oxygen species metabolic process1.59E-02
137GO:0051302: regulation of cell division1.71E-02
138GO:0006825: copper ion transport1.71E-02
139GO:0010431: seed maturation1.82E-02
140GO:0030245: cellulose catabolic process1.95E-02
141GO:2000022: regulation of jasmonic acid mediated signaling pathway1.95E-02
142GO:0031348: negative regulation of defense response1.95E-02
143GO:0006012: galactose metabolic process2.07E-02
144GO:0009411: response to UV2.07E-02
145GO:0018105: peptidyl-serine phosphorylation2.15E-02
146GO:0010584: pollen exine formation2.20E-02
147GO:0009306: protein secretion2.20E-02
148GO:0009742: brassinosteroid mediated signaling pathway2.21E-02
149GO:0006662: glycerol ether metabolic process2.59E-02
150GO:0006814: sodium ion transport2.73E-02
151GO:0071554: cell wall organization or biogenesis3.01E-02
152GO:0002229: defense response to oomycetes3.01E-02
153GO:0009630: gravitropism3.16E-02
154GO:0030163: protein catabolic process3.31E-02
155GO:0006464: cellular protein modification process3.46E-02
156GO:0010286: heat acclimation3.61E-02
157GO:0006904: vesicle docking involved in exocytosis3.61E-02
158GO:0001666: response to hypoxia3.92E-02
159GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process4.03E-02
160GO:0009607: response to biotic stimulus4.07E-02
161GO:0010029: regulation of seed germination4.07E-02
162GO:0009627: systemic acquired resistance4.24E-02
163GO:0016567: protein ubiquitination4.37E-02
164GO:0006950: response to stress4.40E-02
165GO:0016049: cell growth4.56E-02
166GO:0006979: response to oxidative stress4.87E-02
167GO:0048767: root hair elongation4.90E-02
168GO:0010311: lateral root formation4.90E-02
169GO:0009832: plant-type cell wall biogenesis4.90E-02
RankGO TermAdjusted P value
1GO:0004610: phosphoacetylglucosamine mutase activity0.00E+00
2GO:0050334: thiaminase activity0.00E+00
3GO:2001080: chitosan binding0.00E+00
4GO:0004672: protein kinase activity3.87E-06
5GO:0008320: protein transmembrane transporter activity5.30E-06
6GO:0004714: transmembrane receptor protein tyrosine kinase activity8.02E-06
7GO:0004674: protein serine/threonine kinase activity5.79E-05
8GO:0019199: transmembrane receptor protein kinase activity5.93E-05
9GO:0070696: transmembrane receptor protein serine/threonine kinase binding9.36E-05
10GO:0033612: receptor serine/threonine kinase binding1.48E-04
11GO:0016301: kinase activity2.27E-04
12GO:0050577: GDP-L-fucose synthase activity3.02E-04
13GO:0032050: clathrin heavy chain binding3.02E-04
14GO:1901149: salicylic acid binding3.02E-04
15GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity3.02E-04
16GO:0015245: fatty acid transporter activity3.02E-04
17GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity3.02E-04
18GO:0005524: ATP binding4.16E-04
19GO:0004713: protein tyrosine kinase activity6.23E-04
20GO:0004594: pantothenate kinase activity6.60E-04
21GO:0015036: disulfide oxidoreductase activity6.60E-04
22GO:0008728: GTP diphosphokinase activity6.60E-04
23GO:0005388: calcium-transporting ATPase activity9.29E-04
24GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity1.07E-03
25GO:0031683: G-protein beta/gamma-subunit complex binding1.07E-03
26GO:0004383: guanylate cyclase activity1.07E-03
27GO:0001664: G-protein coupled receptor binding1.07E-03
28GO:0004871: signal transducer activity1.32E-03
29GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.32E-03
30GO:0010328: auxin influx transmembrane transporter activity2.06E-03
31GO:0050373: UDP-arabinose 4-epimerase activity2.06E-03
32GO:0005459: UDP-galactose transmembrane transporter activity2.63E-03
33GO:0005546: phosphatidylinositol-4,5-bisphosphate binding2.63E-03
34GO:0005496: steroid binding2.63E-03
35GO:0004709: MAP kinase kinase kinase activity3.24E-03
36GO:0008519: ammonium transmembrane transporter activity3.24E-03
37GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity3.90E-03
38GO:0003978: UDP-glucose 4-epimerase activity3.90E-03
39GO:0004144: diacylglycerol O-acyltransferase activity3.90E-03
40GO:0004656: procollagen-proline 4-dioxygenase activity3.90E-03
41GO:0019900: kinase binding3.90E-03
42GO:0015491: cation:cation antiporter activity5.35E-03
43GO:0008375: acetylglucosaminyltransferase activity5.66E-03
44GO:0008142: oxysterol binding6.13E-03
45GO:0004630: phospholipase D activity6.13E-03
46GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity6.13E-03
47GO:0008171: O-methyltransferase activity8.70E-03
48GO:0008047: enzyme activator activity8.70E-03
49GO:0004864: protein phosphatase inhibitor activity8.70E-03
50GO:0004712: protein serine/threonine/tyrosine kinase activity9.16E-03
51GO:0008559: xenobiotic-transporting ATPase activity9.63E-03
52GO:0015198: oligopeptide transporter activity1.06E-02
53GO:0010329: auxin efflux transmembrane transporter activity1.16E-02
54GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.16E-02
55GO:0008081: phosphoric diester hydrolase activity1.16E-02
56GO:0031072: heat shock protein binding1.16E-02
57GO:0035091: phosphatidylinositol binding1.17E-02
58GO:0008061: chitin binding1.37E-02
59GO:0004190: aspartic-type endopeptidase activity1.37E-02
60GO:0005509: calcium ion binding1.43E-02
61GO:0031418: L-ascorbic acid binding1.59E-02
62GO:0031625: ubiquitin protein ligase binding1.62E-02
63GO:0019706: protein-cysteine S-palmitoyltransferase activity1.82E-02
64GO:0003824: catalytic activity1.93E-02
65GO:0008810: cellulase activity2.07E-02
66GO:0047134: protein-disulfide reductase activity2.33E-02
67GO:0004722: protein serine/threonine phosphatase activity2.42E-02
68GO:0004791: thioredoxin-disulfide reductase activity2.73E-02
69GO:0016853: isomerase activity2.73E-02
70GO:0050662: coenzyme binding2.73E-02
71GO:0004842: ubiquitin-protein transferase activity2.84E-02
72GO:0005516: calmodulin binding3.14E-02
73GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor3.31E-02
74GO:0016413: O-acetyltransferase activity3.76E-02
75GO:0009931: calcium-dependent protein serine/threonine kinase activity4.24E-02
76GO:0004806: triglyceride lipase activity4.40E-02
77GO:0030247: polysaccharide binding4.40E-02
78GO:0004683: calmodulin-dependent protein kinase activity4.40E-02
79GO:0008757: S-adenosylmethionine-dependent methyltransferase activity4.56E-02
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Gene type



Gene DE type





AT1G63440