GO Enrichment Analysis of Co-expressed Genes with
AT5G08540
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010422: regulation of brassinosteroid biosynthetic process | 0.00E+00 |
| 2 | GO:0018131: oxazole or thiazole biosynthetic process | 0.00E+00 |
| 3 | GO:0000455: enzyme-directed rRNA pseudouridine synthesis | 0.00E+00 |
| 4 | GO:0000489: maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | 0.00E+00 |
| 5 | GO:0035884: arabinan biosynthetic process | 0.00E+00 |
| 6 | GO:0097164: ammonium ion metabolic process | 0.00E+00 |
| 7 | GO:0045184: establishment of protein localization | 0.00E+00 |
| 8 | GO:1903224: regulation of endodermal cell differentiation | 0.00E+00 |
| 9 | GO:0006003: fructose 2,6-bisphosphate metabolic process | 0.00E+00 |
| 10 | GO:0000488: maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | 0.00E+00 |
| 11 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 12 | GO:0015843: methylammonium transport | 0.00E+00 |
| 13 | GO:0042793: transcription from plastid promoter | 1.43E-04 |
| 14 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 2.15E-04 |
| 15 | GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic | 3.11E-04 |
| 16 | GO:0090558: plant epidermis development | 3.11E-04 |
| 17 | GO:0070509: calcium ion import | 3.11E-04 |
| 18 | GO:0010480: microsporocyte differentiation | 3.11E-04 |
| 19 | GO:0035987: endodermal cell differentiation | 3.11E-04 |
| 20 | GO:0043609: regulation of carbon utilization | 3.11E-04 |
| 21 | GO:0006436: tryptophanyl-tRNA aminoacylation | 3.11E-04 |
| 22 | GO:0034757: negative regulation of iron ion transport | 3.11E-04 |
| 23 | GO:0006419: alanyl-tRNA aminoacylation | 3.11E-04 |
| 24 | GO:0006427: histidyl-tRNA aminoacylation | 3.11E-04 |
| 25 | GO:0042659: regulation of cell fate specification | 3.11E-04 |
| 26 | GO:0006002: fructose 6-phosphate metabolic process | 3.94E-04 |
| 27 | GO:0010583: response to cyclopentenone | 4.56E-04 |
| 28 | GO:0009658: chloroplast organization | 6.66E-04 |
| 29 | GO:0060359: response to ammonium ion | 6.81E-04 |
| 30 | GO:0048255: mRNA stabilization | 6.81E-04 |
| 31 | GO:0070981: L-asparagine biosynthetic process | 6.81E-04 |
| 32 | GO:0010271: regulation of chlorophyll catabolic process | 6.81E-04 |
| 33 | GO:0009662: etioplast organization | 6.81E-04 |
| 34 | GO:0042325: regulation of phosphorylation | 6.81E-04 |
| 35 | GO:0042550: photosystem I stabilization | 6.81E-04 |
| 36 | GO:0006529: asparagine biosynthetic process | 6.81E-04 |
| 37 | GO:0000160: phosphorelay signal transduction system | 9.96E-04 |
| 38 | GO:0006000: fructose metabolic process | 1.10E-03 |
| 39 | GO:0080117: secondary growth | 1.10E-03 |
| 40 | GO:0042780: tRNA 3'-end processing | 1.10E-03 |
| 41 | GO:0001578: microtubule bundle formation | 1.10E-03 |
| 42 | GO:0043157: response to cation stress | 1.10E-03 |
| 43 | GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic | 1.10E-03 |
| 44 | GO:0090708: specification of plant organ axis polarity | 1.10E-03 |
| 45 | GO:0044211: CTP salvage | 1.58E-03 |
| 46 | GO:0015696: ammonium transport | 1.58E-03 |
| 47 | GO:0046739: transport of virus in multicellular host | 1.58E-03 |
| 48 | GO:2000904: regulation of starch metabolic process | 1.58E-03 |
| 49 | GO:0051289: protein homotetramerization | 1.58E-03 |
| 50 | GO:0043572: plastid fission | 1.58E-03 |
| 51 | GO:2001141: regulation of RNA biosynthetic process | 1.58E-03 |
| 52 | GO:1902476: chloride transmembrane transport | 1.58E-03 |
| 53 | GO:0051639: actin filament network formation | 1.58E-03 |
| 54 | GO:0010239: chloroplast mRNA processing | 1.58E-03 |
| 55 | GO:0009451: RNA modification | 1.64E-03 |
| 56 | GO:0016998: cell wall macromolecule catabolic process | 1.82E-03 |
| 57 | GO:0072488: ammonium transmembrane transport | 2.12E-03 |
| 58 | GO:0030104: water homeostasis | 2.12E-03 |
| 59 | GO:0046656: folic acid biosynthetic process | 2.12E-03 |
| 60 | GO:0006021: inositol biosynthetic process | 2.12E-03 |
| 61 | GO:0044206: UMP salvage | 2.12E-03 |
| 62 | GO:0006346: methylation-dependent chromatin silencing | 2.12E-03 |
| 63 | GO:0051764: actin crosslink formation | 2.12E-03 |
| 64 | GO:0051322: anaphase | 2.12E-03 |
| 65 | GO:0009736: cytokinin-activated signaling pathway | 2.53E-03 |
| 66 | GO:0016131: brassinosteroid metabolic process | 2.71E-03 |
| 67 | GO:0016123: xanthophyll biosynthetic process | 2.71E-03 |
| 68 | GO:0009646: response to absence of light | 3.20E-03 |
| 69 | GO:0006655: phosphatidylglycerol biosynthetic process | 3.35E-03 |
| 70 | GO:0048831: regulation of shoot system development | 3.35E-03 |
| 71 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 3.35E-03 |
| 72 | GO:0006206: pyrimidine nucleobase metabolic process | 3.35E-03 |
| 73 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 3.35E-03 |
| 74 | GO:0009228: thiamine biosynthetic process | 3.35E-03 |
| 75 | GO:0010405: arabinogalactan protein metabolic process | 3.35E-03 |
| 76 | GO:0009959: negative gravitropism | 3.35E-03 |
| 77 | GO:0042026: protein refolding | 4.03E-03 |
| 78 | GO:0006458: 'de novo' protein folding | 4.03E-03 |
| 79 | GO:0009942: longitudinal axis specification | 4.03E-03 |
| 80 | GO:0048509: regulation of meristem development | 4.03E-03 |
| 81 | GO:0046654: tetrahydrofolate biosynthetic process | 4.03E-03 |
| 82 | GO:0030488: tRNA methylation | 4.03E-03 |
| 83 | GO:2000067: regulation of root morphogenesis | 4.03E-03 |
| 84 | GO:0071470: cellular response to osmotic stress | 4.03E-03 |
| 85 | GO:0048437: floral organ development | 4.76E-03 |
| 86 | GO:0006821: chloride transport | 4.76E-03 |
| 87 | GO:0009396: folic acid-containing compound biosynthetic process | 4.76E-03 |
| 88 | GO:0010444: guard mother cell differentiation | 4.76E-03 |
| 89 | GO:0006400: tRNA modification | 4.76E-03 |
| 90 | GO:0015693: magnesium ion transport | 4.76E-03 |
| 91 | GO:0009610: response to symbiotic fungus | 4.76E-03 |
| 92 | GO:0006955: immune response | 4.76E-03 |
| 93 | GO:0048528: post-embryonic root development | 4.76E-03 |
| 94 | GO:0007050: cell cycle arrest | 4.76E-03 |
| 95 | GO:0010027: thylakoid membrane organization | 5.31E-03 |
| 96 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 5.53E-03 |
| 97 | GO:0046620: regulation of organ growth | 5.53E-03 |
| 98 | GO:0019375: galactolipid biosynthetic process | 5.53E-03 |
| 99 | GO:0055075: potassium ion homeostasis | 5.53E-03 |
| 100 | GO:0000105: histidine biosynthetic process | 5.53E-03 |
| 101 | GO:0009231: riboflavin biosynthetic process | 5.53E-03 |
| 102 | GO:0048564: photosystem I assembly | 5.53E-03 |
| 103 | GO:0006974: cellular response to DNA damage stimulus | 5.93E-03 |
| 104 | GO:0010411: xyloglucan metabolic process | 6.26E-03 |
| 105 | GO:0010497: plasmodesmata-mediated intercellular transport | 6.33E-03 |
| 106 | GO:0032544: plastid translation | 6.33E-03 |
| 107 | GO:0007389: pattern specification process | 6.33E-03 |
| 108 | GO:0071482: cellular response to light stimulus | 6.33E-03 |
| 109 | GO:0009790: embryo development | 6.44E-03 |
| 110 | GO:0000373: Group II intron splicing | 7.19E-03 |
| 111 | GO:0006499: N-terminal protein myristoylation | 7.65E-03 |
| 112 | GO:2000280: regulation of root development | 8.07E-03 |
| 113 | GO:0031425: chloroplast RNA processing | 8.07E-03 |
| 114 | GO:0009638: phototropism | 8.07E-03 |
| 115 | GO:0045036: protein targeting to chloroplast | 9.00E-03 |
| 116 | GO:0009089: lysine biosynthetic process via diaminopimelate | 9.96E-03 |
| 117 | GO:0006352: DNA-templated transcription, initiation | 9.96E-03 |
| 118 | GO:0048229: gametophyte development | 9.96E-03 |
| 119 | GO:0010015: root morphogenesis | 9.96E-03 |
| 120 | GO:0016024: CDP-diacylglycerol biosynthetic process | 1.10E-02 |
| 121 | GO:0045037: protein import into chloroplast stroma | 1.10E-02 |
| 122 | GO:0006790: sulfur compound metabolic process | 1.10E-02 |
| 123 | GO:0009926: auxin polar transport | 1.14E-02 |
| 124 | GO:0042546: cell wall biogenesis | 1.18E-02 |
| 125 | GO:2000012: regulation of auxin polar transport | 1.20E-02 |
| 126 | GO:0009785: blue light signaling pathway | 1.20E-02 |
| 127 | GO:0050826: response to freezing | 1.20E-02 |
| 128 | GO:0010075: regulation of meristem growth | 1.20E-02 |
| 129 | GO:0006810: transport | 1.23E-02 |
| 130 | GO:0006541: glutamine metabolic process | 1.31E-02 |
| 131 | GO:0010207: photosystem II assembly | 1.31E-02 |
| 132 | GO:0010020: chloroplast fission | 1.31E-02 |
| 133 | GO:0009934: regulation of meristem structural organization | 1.31E-02 |
| 134 | GO:0090351: seedling development | 1.42E-02 |
| 135 | GO:0070588: calcium ion transmembrane transport | 1.42E-02 |
| 136 | GO:0046854: phosphatidylinositol phosphorylation | 1.42E-02 |
| 137 | GO:0006833: water transport | 1.53E-02 |
| 138 | GO:0000027: ribosomal large subunit assembly | 1.65E-02 |
| 139 | GO:0051017: actin filament bundle assembly | 1.65E-02 |
| 140 | GO:0005992: trehalose biosynthetic process | 1.65E-02 |
| 141 | GO:0006418: tRNA aminoacylation for protein translation | 1.77E-02 |
| 142 | GO:0051302: regulation of cell division | 1.77E-02 |
| 143 | GO:0019953: sexual reproduction | 1.77E-02 |
| 144 | GO:0006096: glycolytic process | 1.82E-02 |
| 145 | GO:0009416: response to light stimulus | 1.84E-02 |
| 146 | GO:0061077: chaperone-mediated protein folding | 1.89E-02 |
| 147 | GO:0006306: DNA methylation | 1.89E-02 |
| 148 | GO:0031408: oxylipin biosynthetic process | 1.89E-02 |
| 149 | GO:0006730: one-carbon metabolic process | 2.01E-02 |
| 150 | GO:0007005: mitochondrion organization | 2.01E-02 |
| 151 | GO:0071215: cellular response to abscisic acid stimulus | 2.14E-02 |
| 152 | GO:0010082: regulation of root meristem growth | 2.14E-02 |
| 153 | GO:0070417: cellular response to cold | 2.41E-02 |
| 154 | GO:0016117: carotenoid biosynthetic process | 2.41E-02 |
| 155 | GO:0000226: microtubule cytoskeleton organization | 2.55E-02 |
| 156 | GO:0010087: phloem or xylem histogenesis | 2.55E-02 |
| 157 | GO:0048653: anther development | 2.55E-02 |
| 158 | GO:0006814: sodium ion transport | 2.83E-02 |
| 159 | GO:0006468: protein phosphorylation | 2.96E-02 |
| 160 | GO:0008654: phospholipid biosynthetic process | 2.97E-02 |
| 161 | GO:0009851: auxin biosynthetic process | 2.97E-02 |
| 162 | GO:0000302: response to reactive oxygen species | 3.12E-02 |
| 163 | GO:0016132: brassinosteroid biosynthetic process | 3.12E-02 |
| 164 | GO:0031047: gene silencing by RNA | 3.27E-02 |
| 165 | GO:0009630: gravitropism | 3.27E-02 |
| 166 | GO:0010252: auxin homeostasis | 3.58E-02 |
| 167 | GO:0009828: plant-type cell wall loosening | 3.58E-02 |
| 168 | GO:0000910: cytokinesis | 3.89E-02 |
| 169 | GO:0010029: regulation of seed germination | 4.22E-02 |
| 170 | GO:0007166: cell surface receptor signaling pathway | 4.32E-02 |
| 171 | GO:0009734: auxin-activated signaling pathway | 4.54E-02 |
| 172 | GO:0006508: proteolysis | 4.85E-02 |
| 173 | GO:0048481: plant ovule development | 4.89E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity | 0.00E+00 |
| 2 | GO:0003873: 6-phosphofructo-2-kinase activity | 0.00E+00 |
| 3 | GO:0004401: histidinol-phosphatase activity | 0.00E+00 |
| 4 | GO:0004056: argininosuccinate lyase activity | 0.00E+00 |
| 5 | GO:0070009: serine-type aminopeptidase activity | 0.00E+00 |
| 6 | GO:0052834: inositol monophosphate phosphatase activity | 0.00E+00 |
| 7 | GO:0042834: peptidoglycan binding | 3.11E-04 |
| 8 | GO:0004156: dihydropteroate synthase activity | 3.11E-04 |
| 9 | GO:0003848: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity | 3.11E-04 |
| 10 | GO:0004813: alanine-tRNA ligase activity | 3.11E-04 |
| 11 | GO:0008835: diaminohydroxyphosphoribosylaminopyrimidine deaminase activity | 3.11E-04 |
| 12 | GO:0004071: aspartate-ammonia ligase activity | 3.11E-04 |
| 13 | GO:0004821: histidine-tRNA ligase activity | 3.11E-04 |
| 14 | GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity | 3.11E-04 |
| 15 | GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity | 3.11E-04 |
| 16 | GO:0046481: digalactosyldiacylglycerol synthase activity | 3.11E-04 |
| 17 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 3.11E-04 |
| 18 | GO:0004830: tryptophan-tRNA ligase activity | 3.11E-04 |
| 19 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 3.11E-04 |
| 20 | GO:0046480: galactolipid galactosyltransferase activity | 3.11E-04 |
| 21 | GO:0005227: calcium activated cation channel activity | 3.11E-04 |
| 22 | GO:0008836: diaminopimelate decarboxylase activity | 3.11E-04 |
| 23 | GO:0008934: inositol monophosphate 1-phosphatase activity | 6.81E-04 |
| 24 | GO:0052833: inositol monophosphate 4-phosphatase activity | 6.81E-04 |
| 25 | GO:0009884: cytokinin receptor activity | 6.81E-04 |
| 26 | GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity | 6.81E-04 |
| 27 | GO:0010291: carotene beta-ring hydroxylase activity | 6.81E-04 |
| 28 | GO:0052832: inositol monophosphate 3-phosphatase activity | 6.81E-04 |
| 29 | GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity | 6.81E-04 |
| 30 | GO:0070330: aromatase activity | 1.10E-03 |
| 31 | GO:0017150: tRNA dihydrouridine synthase activity | 1.10E-03 |
| 32 | GO:0042781: 3'-tRNA processing endoribonuclease activity | 1.10E-03 |
| 33 | GO:0005034: osmosensor activity | 1.10E-03 |
| 34 | GO:0046524: sucrose-phosphate synthase activity | 1.10E-03 |
| 35 | GO:0035250: UDP-galactosyltransferase activity | 1.58E-03 |
| 36 | GO:0008508: bile acid:sodium symporter activity | 1.58E-03 |
| 37 | GO:0001872: (1->3)-beta-D-glucan binding | 1.58E-03 |
| 38 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 1.58E-03 |
| 39 | GO:0004176: ATP-dependent peptidase activity | 1.82E-03 |
| 40 | GO:0016987: sigma factor activity | 2.12E-03 |
| 41 | GO:0005253: anion channel activity | 2.12E-03 |
| 42 | GO:0001053: plastid sigma factor activity | 2.12E-03 |
| 43 | GO:0004845: uracil phosphoribosyltransferase activity | 2.12E-03 |
| 44 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 2.71E-03 |
| 45 | GO:0005275: amine transmembrane transporter activity | 2.71E-03 |
| 46 | GO:0018685: alkane 1-monooxygenase activity | 2.71E-03 |
| 47 | GO:0005524: ATP binding | 3.35E-03 |
| 48 | GO:0008519: ammonium transmembrane transporter activity | 3.35E-03 |
| 49 | GO:0005247: voltage-gated chloride channel activity | 3.35E-03 |
| 50 | GO:2001070: starch binding | 3.35E-03 |
| 51 | GO:0004605: phosphatidate cytidylyltransferase activity | 3.35E-03 |
| 52 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 3.35E-03 |
| 53 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 3.68E-03 |
| 54 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 4.03E-03 |
| 55 | GO:0004849: uridine kinase activity | 4.03E-03 |
| 56 | GO:0019900: kinase binding | 4.03E-03 |
| 57 | GO:0008195: phosphatidate phosphatase activity | 4.03E-03 |
| 58 | GO:0000156: phosphorelay response regulator activity | 4.19E-03 |
| 59 | GO:0008237: metallopeptidase activity | 4.73E-03 |
| 60 | GO:0003872: 6-phosphofructokinase activity | 4.76E-03 |
| 61 | GO:0016597: amino acid binding | 5.02E-03 |
| 62 | GO:0042803: protein homodimerization activity | 6.06E-03 |
| 63 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 6.26E-03 |
| 64 | GO:0004222: metalloendopeptidase activity | 7.65E-03 |
| 65 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 8.02E-03 |
| 66 | GO:0009672: auxin:proton symporter activity | 8.07E-03 |
| 67 | GO:0004519: endonuclease activity | 8.81E-03 |
| 68 | GO:0004673: protein histidine kinase activity | 9.00E-03 |
| 69 | GO:0004805: trehalose-phosphatase activity | 9.00E-03 |
| 70 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 9.96E-03 |
| 71 | GO:0044183: protein binding involved in protein folding | 9.96E-03 |
| 72 | GO:0042802: identical protein binding | 1.08E-02 |
| 73 | GO:0000049: tRNA binding | 1.10E-02 |
| 74 | GO:0010329: auxin efflux transmembrane transporter activity | 1.20E-02 |
| 75 | GO:0004022: alcohol dehydrogenase (NAD) activity | 1.20E-02 |
| 76 | GO:0004089: carbonate dehydratase activity | 1.20E-02 |
| 77 | GO:0015095: magnesium ion transmembrane transporter activity | 1.20E-02 |
| 78 | GO:0031072: heat shock protein binding | 1.20E-02 |
| 79 | GO:0000155: phosphorelay sensor kinase activity | 1.20E-02 |
| 80 | GO:0005262: calcium channel activity | 1.20E-02 |
| 81 | GO:0019888: protein phosphatase regulator activity | 1.20E-02 |
| 82 | GO:0009982: pseudouridine synthase activity | 1.20E-02 |
| 83 | GO:0004672: protein kinase activity | 1.23E-02 |
| 84 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 1.53E-02 |
| 85 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 1.53E-02 |
| 86 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 1.53E-02 |
| 87 | GO:0003777: microtubule motor activity | 1.70E-02 |
| 88 | GO:0043424: protein histidine kinase binding | 1.77E-02 |
| 89 | GO:0005345: purine nucleobase transmembrane transporter activity | 1.77E-02 |
| 90 | GO:0033612: receptor serine/threonine kinase binding | 1.89E-02 |
| 91 | GO:0003964: RNA-directed DNA polymerase activity | 1.89E-02 |
| 92 | GO:0008408: 3'-5' exonuclease activity | 1.89E-02 |
| 93 | GO:0051082: unfolded protein binding | 2.19E-02 |
| 94 | GO:0008514: organic anion transmembrane transporter activity | 2.27E-02 |
| 95 | GO:0004674: protein serine/threonine kinase activity | 2.33E-02 |
| 96 | GO:0004812: aminoacyl-tRNA ligase activity | 2.41E-02 |
| 97 | GO:0004527: exonuclease activity | 2.68E-02 |
| 98 | GO:0008536: Ran GTPase binding | 2.68E-02 |
| 99 | GO:0050662: coenzyme binding | 2.83E-02 |
| 100 | GO:0016491: oxidoreductase activity | 2.84E-02 |
| 101 | GO:0019901: protein kinase binding | 2.97E-02 |
| 102 | GO:0009055: electron carrier activity | 3.25E-02 |
| 103 | GO:0051015: actin filament binding | 3.42E-02 |
| 104 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 3.53E-02 |
| 105 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 3.73E-02 |
| 106 | GO:0005525: GTP binding | 3.83E-02 |
| 107 | GO:0008017: microtubule binding | 3.96E-02 |
| 108 | GO:0030247: polysaccharide binding | 4.55E-02 |
| 109 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 4.89E-02 |