Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G07840

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0007026: negative regulation of microtubule depolymerization0.00E+00
2GO:0050776: regulation of immune response0.00E+00
3GO:1901698: response to nitrogen compound0.00E+00
4GO:0034971: histone H3-R17 methylation1.30E-05
5GO:0034970: histone H3-R2 methylation1.30E-05
6GO:0034972: histone H3-R26 methylation1.30E-05
7GO:1902884: positive regulation of response to oxidative stress3.42E-05
8GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine3.42E-05
9GO:0071705: nitrogen compound transport6.16E-05
10GO:0009165: nucleotide biosynthetic process1.30E-04
11GO:0071249: cellular response to nitrate1.30E-04
12GO:0006544: glycine metabolic process1.68E-04
13GO:0006563: L-serine metabolic process2.10E-04
14GO:0035194: posttranscriptional gene silencing by RNA2.10E-04
15GO:0050821: protein stabilization3.46E-04
16GO:0042255: ribosome assembly3.46E-04
17GO:0007389: pattern specification process3.94E-04
18GO:0035999: tetrahydrofolate interconversion4.96E-04
19GO:0030422: production of siRNA involved in RNA interference5.49E-04
20GO:0015706: nitrate transport6.58E-04
21GO:0010167: response to nitrate8.32E-04
22GO:0006071: glycerol metabolic process8.91E-04
23GO:0009116: nucleoside metabolic process9.51E-04
24GO:0043622: cortical microtubule organization1.01E-03
25GO:0006306: DNA methylation1.08E-03
26GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.15E-03
27GO:0031047: gene silencing by RNA1.78E-03
28GO:0032502: developmental process1.78E-03
29GO:0010252: auxin homeostasis1.94E-03
30GO:0016049: cell growth2.52E-03
31GO:0009926: auxin polar transport3.63E-03
32GO:0008643: carbohydrate transport3.82E-03
33GO:0009909: regulation of flower development4.76E-03
34GO:0006096: glycolytic process4.98E-03
35GO:0009742: brassinosteroid mediated signaling pathway5.89E-03
36GO:0010228: vegetative to reproductive phase transition of meristem8.53E-03
37GO:0008380: RNA splicing9.35E-03
38GO:0009658: chloroplast organization1.12E-02
39GO:0042254: ribosome biogenesis1.14E-02
40GO:0016310: phosphorylation1.40E-02
41GO:0015979: photosynthesis1.43E-02
42GO:0016042: lipid catabolic process1.69E-02
43GO:0006629: lipid metabolic process1.72E-02
44GO:0016567: protein ubiquitination1.73E-02
45GO:0048364: root development1.77E-02
46GO:0009734: auxin-activated signaling pathway2.20E-02
47GO:0009416: response to light stimulus2.59E-02
48GO:0051301: cell division2.76E-02
49GO:0045893: positive regulation of transcription, DNA-templated2.86E-02
50GO:0055085: transmembrane transport3.07E-02
51GO:0006511: ubiquitin-dependent protein catabolic process3.22E-02
52GO:0006351: transcription, DNA-templated3.63E-02
53GO:0071555: cell wall organization4.29E-02
54GO:0006468: protein phosphorylation4.40E-02
RankGO TermAdjusted P value
1GO:0032549: ribonucleoside binding5.93E-08
2GO:0001054: RNA polymerase I activity6.90E-06
3GO:0051010: microtubule plus-end binding1.30E-05
4GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity3.42E-05
5GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity3.42E-05
6GO:0035241: protein-arginine omega-N monomethyltransferase activity3.42E-05
7GO:0047334: diphosphate-fructose-6-phosphate 1-phosphotransferase activity6.16E-05
8GO:0008469: histone-arginine N-methyltransferase activity6.16E-05
9GO:0004749: ribose phosphate diphosphokinase activity9.36E-05
10GO:0004372: glycine hydroxymethyltransferase activity1.68E-04
11GO:0003899: DNA-directed 5'-3' RNA polymerase activity2.46E-04
12GO:0008889: glycerophosphodiester phosphodiesterase activity4.45E-04
13GO:0009672: auxin:proton symporter activity4.96E-04
14GO:0005089: Rho guanyl-nucleotide exchange factor activity6.03E-04
15GO:0010329: auxin efflux transmembrane transporter activity7.14E-04
16GO:0003727: single-stranded RNA binding1.27E-03
17GO:0008514: organic anion transmembrane transporter activity1.27E-03
18GO:0016759: cellulose synthase activity1.94E-03
19GO:0003697: single-stranded DNA binding3.05E-03
20GO:0003690: double-stranded DNA binding4.55E-03
21GO:0019843: rRNA binding6.61E-03
22GO:0030170: pyridoxal phosphate binding7.10E-03
23GO:0008194: UDP-glycosyltransferase activity8.93E-03
24GO:0008168: methyltransferase activity1.09E-02
25GO:0046982: protein heterodimerization activity1.11E-02
26GO:0016788: hydrolase activity, acting on ester bonds1.14E-02
27GO:0052689: carboxylic ester hydrolase activity1.40E-02
28GO:0042803: protein homodimerization activity1.53E-02
29GO:0004871: signal transducer activity1.53E-02
30GO:0016757: transferase activity, transferring glycosyl groups1.94E-02
31GO:0004674: protein serine/threonine kinase activity2.81E-02
32GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds3.16E-02
33GO:0005516: calmodulin binding3.47E-02
34GO:0003677: DNA binding4.38E-02
35GO:0005215: transporter activity4.60E-02
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Gene type



Gene DE type