GO Enrichment Analysis of Co-expressed Genes with
AT5G07580
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019918: peptidyl-arginine methylation, to symmetrical-dimethyl arginine | 0.00E+00 |
| 2 | GO:0043972: histone H3-K23 acetylation | 0.00E+00 |
| 3 | GO:0042794: rRNA transcription from plastid promoter | 0.00E+00 |
| 4 | GO:0044154: histone H3-K14 acetylation | 0.00E+00 |
| 5 | GO:0009658: chloroplast organization | 3.20E-05 |
| 6 | GO:0042255: ribosome assembly | 6.41E-05 |
| 7 | GO:0006353: DNA-templated transcription, termination | 6.41E-05 |
| 8 | GO:0036228: protein targeting to nuclear inner membrane | 1.08E-04 |
| 9 | GO:0033206: meiotic cytokinesis | 1.08E-04 |
| 10 | GO:0006999: nuclear pore organization | 1.08E-04 |
| 11 | GO:0043971: histone H3-K18 acetylation | 1.08E-04 |
| 12 | GO:0010102: lateral root morphogenesis | 2.25E-04 |
| 13 | GO:0010220: positive regulation of vernalization response | 2.52E-04 |
| 14 | GO:0010424: DNA methylation on cytosine within a CG sequence | 2.52E-04 |
| 15 | GO:0010069: zygote asymmetric cytokinesis in embryo sac | 2.52E-04 |
| 16 | GO:0015675: nickel cation transport | 4.19E-04 |
| 17 | GO:0006168: adenine salvage | 6.01E-04 |
| 18 | GO:1902290: positive regulation of defense response to oomycetes | 6.01E-04 |
| 19 | GO:0006166: purine ribonucleoside salvage | 6.01E-04 |
| 20 | GO:0006808: regulation of nitrogen utilization | 7.98E-04 |
| 21 | GO:1900864: mitochondrial RNA modification | 7.98E-04 |
| 22 | GO:0071249: cellular response to nitrate | 7.98E-04 |
| 23 | GO:0032502: developmental process | 9.14E-04 |
| 24 | GO:0044209: AMP salvage | 1.01E-03 |
| 25 | GO:0042793: transcription from plastid promoter | 1.23E-03 |
| 26 | GO:0035435: phosphate ion transmembrane transport | 1.23E-03 |
| 27 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 1.47E-03 |
| 28 | GO:0000911: cytokinesis by cell plate formation | 1.47E-03 |
| 29 | GO:2000033: regulation of seed dormancy process | 1.47E-03 |
| 30 | GO:0010098: suspensor development | 1.73E-03 |
| 31 | GO:0010374: stomatal complex development | 1.73E-03 |
| 32 | GO:0009938: negative regulation of gibberellic acid mediated signaling pathway | 2.00E-03 |
| 33 | GO:0010052: guard cell differentiation | 2.28E-03 |
| 34 | GO:0044030: regulation of DNA methylation | 2.28E-03 |
| 35 | GO:0009880: embryonic pattern specification | 2.28E-03 |
| 36 | GO:0010233: phloem transport | 2.28E-03 |
| 37 | GO:0006607: NLS-bearing protein import into nucleus | 2.57E-03 |
| 38 | GO:0009245: lipid A biosynthetic process | 2.57E-03 |
| 39 | GO:0006349: regulation of gene expression by genetic imprinting | 2.88E-03 |
| 40 | GO:1900426: positive regulation of defense response to bacterium | 2.88E-03 |
| 41 | GO:0010216: maintenance of DNA methylation | 3.53E-03 |
| 42 | GO:0010152: pollen maturation | 3.87E-03 |
| 43 | GO:0006281: DNA repair | 4.44E-03 |
| 44 | GO:0009740: gibberellic acid mediated signaling pathway | 4.58E-03 |
| 45 | GO:0010020: chloroplast fission | 4.59E-03 |
| 46 | GO:0006270: DNA replication initiation | 4.59E-03 |
| 47 | GO:0080188: RNA-directed DNA methylation | 4.96E-03 |
| 48 | GO:2000377: regulation of reactive oxygen species metabolic process | 5.75E-03 |
| 49 | GO:0000027: ribosomal large subunit assembly | 5.75E-03 |
| 50 | GO:0009863: salicylic acid mediated signaling pathway | 5.75E-03 |
| 51 | GO:0010187: negative regulation of seed germination | 5.75E-03 |
| 52 | GO:0010026: trichome differentiation | 6.15E-03 |
| 53 | GO:0006306: DNA methylation | 6.56E-03 |
| 54 | GO:0009294: DNA mediated transformation | 7.42E-03 |
| 55 | GO:0010091: trichome branching | 7.87E-03 |
| 56 | GO:0048443: stamen development | 7.87E-03 |
| 57 | GO:0006284: base-excision repair | 7.87E-03 |
| 58 | GO:0051028: mRNA transport | 8.32E-03 |
| 59 | GO:0080022: primary root development | 8.79E-03 |
| 60 | GO:0010501: RNA secondary structure unwinding | 8.79E-03 |
| 61 | GO:0010051: xylem and phloem pattern formation | 8.79E-03 |
| 62 | GO:0048653: anther development | 8.79E-03 |
| 63 | GO:0046323: glucose import | 9.26E-03 |
| 64 | GO:0006342: chromatin silencing | 9.26E-03 |
| 65 | GO:0009739: response to gibberellin | 9.39E-03 |
| 66 | GO:0008380: RNA splicing | 1.00E-02 |
| 67 | GO:0009791: post-embryonic development | 1.02E-02 |
| 68 | GO:0080156: mitochondrial mRNA modification | 1.07E-02 |
| 69 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 1.07E-02 |
| 70 | GO:0002229: defense response to oomycetes | 1.07E-02 |
| 71 | GO:0031047: gene silencing by RNA | 1.12E-02 |
| 72 | GO:0010090: trichome morphogenesis | 1.18E-02 |
| 73 | GO:0010029: regulation of seed germination | 1.45E-02 |
| 74 | GO:0010218: response to far red light | 1.80E-02 |
| 75 | GO:0048527: lateral root development | 1.86E-02 |
| 76 | GO:0009910: negative regulation of flower development | 1.86E-02 |
| 77 | GO:0009867: jasmonic acid mediated signaling pathway | 1.99E-02 |
| 78 | GO:0030001: metal ion transport | 2.18E-02 |
| 79 | GO:0048364: root development | 2.49E-02 |
| 80 | GO:0009965: leaf morphogenesis | 2.59E-02 |
| 81 | GO:0006260: DNA replication | 2.73E-02 |
| 82 | GO:0031347: regulation of defense response | 2.73E-02 |
| 83 | GO:0009846: pollen germination | 2.80E-02 |
| 84 | GO:0042538: hyperosmotic salinity response | 2.80E-02 |
| 85 | GO:0006364: rRNA processing | 2.94E-02 |
| 86 | GO:0051603: proteolysis involved in cellular protein catabolic process | 3.02E-02 |
| 87 | GO:0006355: regulation of transcription, DNA-templated | 3.09E-02 |
| 88 | GO:0009909: regulation of flower development | 3.17E-02 |
| 89 | GO:0048367: shoot system development | 3.39E-02 |
| 90 | GO:0016569: covalent chromatin modification | 3.63E-02 |
| 91 | GO:0051726: regulation of cell cycle | 3.94E-02 |
| 92 | GO:0009058: biosynthetic process | 4.61E-02 |
| 93 | GO:0009845: seed germination | 4.69E-02 |
| 94 | GO:0009790: embryo development | 4.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016901: oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor | 1.08E-04 |
| 2 | GO:0004016: adenylate cyclase activity | 1.08E-04 |
| 3 | GO:0003697: single-stranded DNA binding | 1.85E-04 |
| 4 | GO:0015099: nickel cation transmembrane transporter activity | 2.52E-04 |
| 5 | GO:0003690: double-stranded DNA binding | 4.05E-04 |
| 6 | GO:0008469: histone-arginine N-methyltransferase activity | 4.19E-04 |
| 7 | GO:0070181: small ribosomal subunit rRNA binding | 4.19E-04 |
| 8 | GO:0003727: single-stranded RNA binding | 5.60E-04 |
| 9 | GO:0003999: adenine phosphoribosyltransferase activity | 6.01E-04 |
| 10 | GO:0008276: protein methyltransferase activity | 6.01E-04 |
| 11 | GO:0005354: galactose transmembrane transporter activity | 6.01E-04 |
| 12 | GO:0010011: auxin binding | 7.98E-04 |
| 13 | GO:0010385: double-stranded methylated DNA binding | 7.98E-04 |
| 14 | GO:0008725: DNA-3-methyladenine glycosylase activity | 1.01E-03 |
| 15 | GO:0031177: phosphopantetheine binding | 1.23E-03 |
| 16 | GO:0003688: DNA replication origin binding | 1.23E-03 |
| 17 | GO:0000035: acyl binding | 1.47E-03 |
| 18 | GO:0003886: DNA (cytosine-5-)-methyltransferase activity | 1.47E-03 |
| 19 | GO:0017056: structural constituent of nuclear pore | 2.00E-03 |
| 20 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 2.00E-03 |
| 21 | GO:0008271: secondary active sulfate transmembrane transporter activity | 2.28E-03 |
| 22 | GO:0000989: transcription factor activity, transcription factor binding | 2.57E-03 |
| 23 | GO:0005487: nucleocytoplasmic transporter activity | 2.88E-03 |
| 24 | GO:0015116: sulfate transmembrane transporter activity | 3.87E-03 |
| 25 | GO:0015114: phosphate ion transmembrane transporter activity | 4.23E-03 |
| 26 | GO:0019843: rRNA binding | 6.08E-03 |
| 27 | GO:0004402: histone acetyltransferase activity | 8.79E-03 |
| 28 | GO:0008080: N-acetyltransferase activity | 9.26E-03 |
| 29 | GO:0005355: glucose transmembrane transporter activity | 9.74E-03 |
| 30 | GO:0019901: protein kinase binding | 1.02E-02 |
| 31 | GO:0048038: quinone binding | 1.07E-02 |
| 32 | GO:0004518: nuclease activity | 1.12E-02 |
| 33 | GO:0004197: cysteine-type endopeptidase activity | 1.12E-02 |
| 34 | GO:0016759: cellulose synthase activity | 1.23E-02 |
| 35 | GO:0004004: ATP-dependent RNA helicase activity | 1.56E-02 |
| 36 | GO:0003723: RNA binding | 1.64E-02 |
| 37 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 1.80E-02 |
| 38 | GO:0003993: acid phosphatase activity | 2.05E-02 |
| 39 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 2.12E-02 |
| 40 | GO:0042393: histone binding | 2.18E-02 |
| 41 | GO:0015293: symporter activity | 2.59E-02 |
| 42 | GO:0004519: endonuclease activity | 2.60E-02 |
| 43 | GO:0016298: lipase activity | 3.02E-02 |
| 44 | GO:0008234: cysteine-type peptidase activity | 3.17E-02 |
| 45 | GO:0004650: polygalacturonase activity | 3.55E-02 |
| 46 | GO:0016874: ligase activity | 3.63E-02 |
| 47 | GO:0003729: mRNA binding | 3.68E-02 |
| 48 | GO:0008026: ATP-dependent helicase activity | 3.94E-02 |
| 49 | GO:0016829: lyase activity | 4.69E-02 |