co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G06670

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0045014: negative regulation of transcription by glucose	0.00E+00
2	GO:0010059: positive regulation of atrichoblast fate specification	0.00E+00
3	GO:0090627: plant epidermal cell differentiation	0.00E+00
4	GO:0009606: tropism	0.00E+00
5	GO:0035884: arabinan biosynthetic process	0.00E+00
6	GO:0090322: regulation of superoxide metabolic process	0.00E+00
7	GO:1901528: hydrogen peroxide mediated signaling pathway involved in stomatal movement	0.00E+00
8	GO:1903224: regulation of endodermal cell differentiation	0.00E+00
9	GO:0002949: tRNA threonylcarbamoyladenosine modification	0.00E+00
10	GO:0045184: establishment of protein localization	0.00E+00
11	GO:0080127: fruit septum development	0.00E+00
12	GO:0002103: endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	0.00E+00
13	GO:0019988: charged-tRNA amino acid modification	0.00E+00
14	GO:0090615: mitochondrial mRNA processing	0.00E+00
15	GO:0042794: rRNA transcription from plastid promoter	0.00E+00
16	GO:0042793: transcription from plastid promoter	4.30E-12
17	GO:0046620: regulation of organ growth	1.94E-08
18	GO:0009658: chloroplast organization	2.13E-07
19	GO:0010569: regulation of double-strand break repair via homologous recombination	2.11E-05
20	GO:0009451: RNA modification	2.52E-05
21	GO:0006518: peptide metabolic process	6.86E-05
22	GO:0009734: auxin-activated signaling pathway	9.27E-05
23	GO:0009416: response to light stimulus	2.02E-04
24	GO:2000038: regulation of stomatal complex development	2.41E-04
25	GO:1900864: mitochondrial RNA modification	2.41E-04
26	GO:0009733: response to auxin	2.99E-04
27	GO:0009913: epidermal cell differentiation	5.03E-04
28	GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process	7.03E-04
29	GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic	7.03E-04
30	GO:1905039: carboxylic acid transmembrane transport	7.03E-04
31	GO:0080112: seed growth	7.03E-04
32	GO:1905200: gibberellic acid transmembrane transport	7.03E-04
33	GO:0090558: plant epidermis development	7.03E-04
34	GO:1903866: palisade mesophyll development	7.03E-04
35	GO:0010063: positive regulation of trichoblast fate specification	7.03E-04
36	GO:0035987: endodermal cell differentiation	7.03E-04
37	GO:0006436: tryptophanyl-tRNA aminoacylation	7.03E-04
38	GO:0034757: negative regulation of iron ion transport	7.03E-04
39	GO:0042659: regulation of cell fate specification	7.03E-04
40	GO:0006955: immune response	8.51E-04
41	GO:0042255: ribosome assembly	1.06E-03
42	GO:0006353: DNA-templated transcription, termination	1.06E-03
43	GO:0000105: histidine biosynthetic process	1.06E-03
44	GO:0009793: embryo development ending in seed dormancy	1.28E-03
45	GO:0010305: leaf vascular tissue pattern formation	1.49E-03
46	GO:1901529: positive regulation of anion channel activity	1.52E-03
47	GO:1902326: positive regulation of chlorophyll biosynthetic process	1.52E-03
48	GO:0010271: regulation of chlorophyll catabolic process	1.52E-03
49	GO:0010541: acropetal auxin transport	1.52E-03
50	GO:0018026: peptidyl-lysine monomethylation	1.52E-03
51	GO:0009662: etioplast organization	1.52E-03
52	GO:2000071: regulation of defense response by callose deposition	1.52E-03
53	GO:1900033: negative regulation of trichome patterning	1.52E-03
54	GO:1904143: positive regulation of carotenoid biosynthetic process	1.52E-03
55	GO:0080009: mRNA methylation	1.52E-03
56	GO:2000123: positive regulation of stomatal complex development	1.52E-03
57	GO:0009926: auxin polar transport	1.65E-03
58	GO:1900865: chloroplast RNA modification	1.83E-03
59	GO:0048829: root cap development	2.14E-03
60	GO:0006949: syncytium formation	2.14E-03
61	GO:0090708: specification of plant organ axis polarity	2.50E-03
62	GO:0080117: secondary growth	2.50E-03
63	GO:0090391: granum assembly	2.50E-03
64	GO:0042780: tRNA 3'-end processing	2.50E-03
65	GO:0001578: microtubule bundle formation	2.50E-03
66	GO:0009828: plant-type cell wall loosening	2.50E-03
67	GO:0030029: actin filament-based process	2.50E-03
68	GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic	2.50E-03
69	GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement	2.50E-03
70	GO:0006364: rRNA processing	2.61E-03
71	GO:0010588: cotyledon vascular tissue pattern formation	3.23E-03
72	GO:0043481: anthocyanin accumulation in tissues in response to UV light	3.64E-03
73	GO:0009800: cinnamic acid biosynthetic process	3.64E-03
74	GO:0010306: rhamnogalacturonan II biosynthetic process	3.64E-03
75	GO:0046739: transport of virus in multicellular host	3.64E-03
76	GO:1902290: positive regulation of defense response to oomycetes	3.64E-03
77	GO:0010371: regulation of gibberellin biosynthetic process	3.64E-03
78	GO:1902476: chloride transmembrane transport	3.64E-03
79	GO:0010071: root meristem specification	3.64E-03
80	GO:0010239: chloroplast mRNA processing	3.64E-03
81	GO:0080188: RNA-directed DNA methylation	4.10E-03
82	GO:0048481: plant ovule development	4.42E-03
83	GO:0030104: water homeostasis	4.92E-03
84	GO:0006221: pyrimidine nucleotide biosynthetic process	4.92E-03
85	GO:0006021: inositol biosynthetic process	4.92E-03
86	GO:0006346: methylation-dependent chromatin silencing	4.92E-03
87	GO:0006479: protein methylation	4.92E-03
88	GO:0048629: trichome patterning	4.92E-03
89	GO:0051322: anaphase	4.92E-03
90	GO:0003333: amino acid transmembrane transport	6.18E-03
91	GO:0016998: cell wall macromolecule catabolic process	6.18E-03
92	GO:0032876: negative regulation of DNA endoreduplication	6.33E-03
93	GO:0030308: negative regulation of cell growth	6.33E-03
94	GO:0010375: stomatal complex patterning	6.33E-03
95	GO:0080110: sporopollenin biosynthetic process	6.33E-03
96	GO:0048497: maintenance of floral organ identity	6.33E-03
97	GO:2000022: regulation of jasmonic acid mediated signaling pathway	6.77E-03
98	GO:0030001: metal ion transport	7.09E-03
99	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	7.40E-03
100	GO:0016554: cytidine to uridine editing	7.86E-03
101	GO:1902456: regulation of stomatal opening	7.86E-03
102	GO:0048831: regulation of shoot system development	7.86E-03
103	GO:0010315: auxin efflux	7.86E-03
104	GO:0003006: developmental process involved in reproduction	7.86E-03
105	GO:0006559: L-phenylalanine catabolic process	7.86E-03
106	GO:0009643: photosynthetic acclimation	7.86E-03
107	GO:0006014: D-ribose metabolic process	7.86E-03
108	GO:0010304: PSII associated light-harvesting complex II catabolic process	7.86E-03
109	GO:0009959: negative gravitropism	7.86E-03
110	GO:0042127: regulation of cell proliferation	8.06E-03
111	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	8.98E-03
112	GO:0010087: phloem or xylem histogenesis	9.46E-03
113	GO:0010118: stomatal movement	9.46E-03
114	GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	9.51E-03
115	GO:0048509: regulation of meristem development	9.51E-03
116	GO:1901259: chloroplast rRNA processing	9.51E-03
117	GO:2000037: regulation of stomatal complex patterning	9.51E-03
118	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	9.51E-03
119	GO:0010310: regulation of hydrogen peroxide metabolic process	9.51E-03
120	GO:2000067: regulation of root morphogenesis	9.51E-03
121	GO:0009955: adaxial/abaxial pattern specification	9.51E-03
122	GO:0071470: cellular response to osmotic stress	9.51E-03
123	GO:0040008: regulation of growth	9.68E-03
124	GO:0031347: regulation of defense response	1.06E-02
125	GO:0009664: plant-type cell wall organization	1.11E-02
126	GO:0006821: chloride transport	1.13E-02
127	GO:0048437: floral organ development	1.13E-02
128	GO:0015937: coenzyme A biosynthetic process	1.13E-02
129	GO:0010103: stomatal complex morphogenesis	1.13E-02
130	GO:0006401: RNA catabolic process	1.13E-02
131	GO:0048825: cotyledon development	1.18E-02
132	GO:0009736: cytokinin-activated signaling pathway	1.22E-02
133	GO:0080156: mitochondrial mRNA modification	1.27E-02
134	GO:0001522: pseudouridine synthesis	1.32E-02
135	GO:0009787: regulation of abscisic acid-activated signaling pathway	1.32E-02
136	GO:0009642: response to light intensity	1.32E-02
137	GO:0048766: root hair initiation	1.32E-02
138	GO:0055075: potassium ion homeostasis	1.32E-02
139	GO:0052543: callose deposition in cell wall	1.32E-02
140	GO:0032502: developmental process	1.35E-02
141	GO:0009827: plant-type cell wall modification	1.51E-02
142	GO:0019430: removal of superoxide radicals	1.51E-02
143	GO:0010497: plasmodesmata-mediated intercellular transport	1.51E-02
144	GO:0009657: plastid organization	1.51E-02
145	GO:0032544: plastid translation	1.51E-02
146	GO:0007389: pattern specification process	1.51E-02
147	GO:0010252: auxin homeostasis	1.54E-02
148	GO:0048367: shoot system development	1.57E-02
149	GO:0009245: lipid A biosynthetic process	1.72E-02
150	GO:0048507: meristem development	1.72E-02
151	GO:0000373: Group II intron splicing	1.72E-02
152	GO:0048589: developmental growth	1.72E-02
153	GO:0000902: cell morphogenesis	1.72E-02
154	GO:0010027: thylakoid membrane organization	1.84E-02
155	GO:0042761: very long-chain fatty acid biosynthetic process	1.94E-02
156	GO:2000280: regulation of root development	1.94E-02
157	GO:0006349: regulation of gene expression by genetic imprinting	1.94E-02
158	GO:0016571: histone methylation	1.94E-02
159	GO:0016573: histone acetylation	1.94E-02
160	GO:1900426: positive regulation of defense response to bacterium	1.94E-02
161	GO:0006535: cysteine biosynthetic process from serine	2.16E-02
162	GO:0031627: telomeric loop formation	2.16E-02
163	GO:0010048: vernalization response	2.16E-02
164	GO:0009682: induced systemic resistance	2.40E-02
165	GO:0015770: sucrose transport	2.40E-02
166	GO:1903507: negative regulation of nucleic acid-templated transcription	2.40E-02
167	GO:0009750: response to fructose	2.40E-02
168	GO:0048765: root hair cell differentiation	2.40E-02
169	GO:0046856: phosphatidylinositol dephosphorylation	2.40E-02
170	GO:0010015: root morphogenesis	2.40E-02
171	GO:0000160: phosphorelay signal transduction system	2.53E-02
172	GO:0010152: pollen maturation	2.64E-02
173	GO:0045037: protein import into chloroplast stroma	2.64E-02
174	GO:0010582: floral meristem determinacy	2.64E-02
175	GO:0008361: regulation of cell size	2.64E-02
176	GO:0006790: sulfur compound metabolic process	2.64E-02
177	GO:0012501: programmed cell death	2.64E-02
178	GO:0009845: seed germination	2.80E-02
179	GO:0010102: lateral root morphogenesis	2.90E-02
180	GO:0009691: cytokinin biosynthetic process	2.90E-02
181	GO:0006865: amino acid transport	2.92E-02
182	GO:0009790: embryo development	3.08E-02
183	GO:0010020: chloroplast fission	3.16E-02
184	GO:0006270: DNA replication initiation	3.16E-02
185	GO:0010540: basipetal auxin transport	3.16E-02
186	GO:0009266: response to temperature stimulus	3.16E-02
187	GO:0048467: gynoecium development	3.16E-02
188	GO:0009901: anther dehiscence	3.43E-02
189	GO:0046854: phosphatidylinositol phosphorylation	3.43E-02
190	GO:0006071: glycerol metabolic process	3.70E-02
191	GO:0006833: water transport	3.70E-02
192	GO:0008283: cell proliferation	3.93E-02
193	GO:0000027: ribosomal large subunit assembly	3.98E-02
194	GO:0080147: root hair cell development	3.98E-02
195	GO:0006338: chromatin remodeling	3.98E-02
196	GO:2000377: regulation of reactive oxygen species metabolic process	3.98E-02
197	GO:0019344: cysteine biosynthetic process	3.98E-02
198	GO:0006418: tRNA aminoacylation for protein translation	4.27E-02
199	GO:0010073: meristem maintenance	4.27E-02
200	GO:0006825: copper ion transport	4.27E-02
201	GO:0051302: regulation of cell division	4.27E-02
202	GO:0019953: sexual reproduction	4.27E-02
203	GO:0007166: cell surface receptor signaling pathway	4.47E-02
204	GO:0006306: DNA methylation	4.57E-02
205	GO:0010431: seed maturation	4.57E-02
206	GO:0006855: drug transmembrane transport	4.58E-02
207	GO:0008380: RNA splicing	4.71E-02
208	GO:0031348: negative regulation of defense response	4.87E-02

Rank	GO Term	Adjusted P value
1	GO:0042834: peptidoglycan binding	0.00E+00
2	GO:0071633: dihydroceramidase activity	0.00E+00
3	GO:0061711: N(6)-L-threonylcarbamoyladenine synthase	0.00E+00
4	GO:0004401: histidinol-phosphatase activity	0.00E+00
5	GO:0052834: inositol monophosphate phosphatase activity	0.00E+00
6	GO:0043399: tRNA A64-2'-O-ribosylphosphate transferase activity	0.00E+00
7	GO:0016763: transferase activity, transferring pentosyl groups	0.00E+00
8	GO:0008859: exoribonuclease II activity	0.00E+00
9	GO:0004519: endonuclease activity	3.59E-05
10	GO:0003723: RNA binding	4.11E-05
11	GO:0019843: rRNA binding	3.44E-04
12	GO:0004632: phosphopantothenate--cysteine ligase activity	7.03E-04
13	GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity	7.03E-04
14	GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity	7.03E-04
15	GO:0016274: protein-arginine N-methyltransferase activity	7.03E-04
16	GO:0052381: tRNA dimethylallyltransferase activity	7.03E-04
17	GO:0004830: tryptophan-tRNA ligase activity	7.03E-04
18	GO:0016901: oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor	7.03E-04
19	GO:0010347: L-galactose-1-phosphate phosphatase activity	7.03E-04
20	GO:0004016: adenylate cyclase activity	7.03E-04
21	GO:0004400: histidinol-phosphate transaminase activity	7.03E-04
22	GO:1905201: gibberellin transmembrane transporter activity	7.03E-04
23	GO:0004222: metalloendopeptidase activity	9.06E-04
24	GO:0003727: single-stranded RNA binding	1.10E-03
25	GO:0008805: carbon-monoxide oxygenase activity	1.52E-03
26	GO:0008934: inositol monophosphate 1-phosphatase activity	1.52E-03
27	GO:0052833: inositol monophosphate 4-phosphatase activity	1.52E-03
28	GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity	1.52E-03
29	GO:0009884: cytokinin receptor activity	1.52E-03
30	GO:0052832: inositol monophosphate 3-phosphatase activity	1.52E-03
31	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	1.52E-03
32	GO:0019901: protein kinase binding	1.79E-03
33	GO:0017150: tRNA dihydrouridine synthase activity	2.50E-03
34	GO:0045548: phenylalanine ammonia-lyase activity	2.50E-03
35	GO:0042781: 3'-tRNA processing endoribonuclease activity	2.50E-03
36	GO:0047334: diphosphate-fructose-6-phosphate 1-phosphotransferase activity	2.50E-03
37	GO:0016805: dipeptidase activity	2.50E-03
38	GO:0005034: osmosensor activity	2.50E-03
39	GO:0003725: double-stranded RNA binding	3.23E-03
40	GO:0009982: pseudouridine synthase activity	3.23E-03
41	GO:0009041: uridylate kinase activity	3.64E-03
42	GO:0008508: bile acid:sodium symporter activity	3.64E-03
43	GO:0001872: (1->3)-beta-D-glucan binding	3.64E-03
44	GO:0010328: auxin influx transmembrane transporter activity	4.92E-03
45	GO:0005253: anion channel activity	4.92E-03
46	GO:0016279: protein-lysine N-methyltransferase activity	4.92E-03
47	GO:0010011: auxin binding	4.92E-03
48	GO:0003697: single-stranded DNA binding	5.99E-03
49	GO:0016773: phosphotransferase activity, alcohol group as acceptor	6.33E-03
50	GO:0008725: DNA-3-methyladenine glycosylase activity	6.33E-03
51	GO:0030570: pectate lyase activity	7.40E-03
52	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	7.74E-03
53	GO:0031177: phosphopantetheine binding	7.86E-03
54	GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity	7.86E-03
55	GO:0004784: superoxide dismutase activity	7.86E-03
56	GO:0005247: voltage-gated chloride channel activity	7.86E-03
57	GO:0003688: DNA replication origin binding	7.86E-03
58	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	9.51E-03
59	GO:0016832: aldehyde-lyase activity	9.51E-03
60	GO:0000035: acyl binding	9.51E-03
61	GO:0004747: ribokinase activity	9.51E-03
62	GO:0019900: kinase binding	9.51E-03
63	GO:0004124: cysteine synthase activity	9.51E-03
64	GO:0001085: RNA polymerase II transcription factor binding	1.02E-02
65	GO:0004871: signal transducer activity	1.26E-02
66	GO:0003690: double-stranded DNA binding	1.27E-02
67	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	1.32E-02
68	GO:0008865: fructokinase activity	1.32E-02
69	GO:0005215: transporter activity	1.33E-02
70	GO:0008173: RNA methyltransferase activity	1.51E-02
71	GO:0008237: metallopeptidase activity	1.64E-02
72	GO:0005200: structural constituent of cytoskeleton	1.64E-02
73	GO:0008889: glycerophosphodiester phosphodiesterase activity	1.72E-02
74	GO:0008168: methyltransferase activity	1.90E-02
75	GO:0009672: auxin:proton symporter activity	1.94E-02
76	GO:0004673: protein histidine kinase activity	2.16E-02
77	GO:0003691: double-stranded telomeric DNA binding	2.40E-02
78	GO:0008515: sucrose transmembrane transporter activity	2.40E-02
79	GO:0008559: xenobiotic-transporting ATPase activity	2.40E-02
80	GO:0015238: drug transmembrane transporter activity	2.53E-02
81	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	2.64E-02
82	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	2.78E-02
83	GO:0000175: 3'-5'-exoribonuclease activity	2.90E-02
84	GO:0010329: auxin efflux transmembrane transporter activity	2.90E-02
85	GO:0004022: alcohol dehydrogenase (NAD) activity	2.90E-02
86	GO:0031072: heat shock protein binding	2.90E-02
87	GO:0000155: phosphorelay sensor kinase activity	2.90E-02
88	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.05E-02
89	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	3.16E-02
90	GO:0051119: sugar transmembrane transporter activity	3.43E-02
91	GO:0004190: aspartic-type endopeptidase activity	3.43E-02
92	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.48E-02
93	GO:0003677: DNA binding	3.69E-02
94	GO:0005515: protein binding	3.93E-02
95	GO:0003714: transcription corepressor activity	3.98E-02
96	GO:0043621: protein self-association	4.25E-02
97	GO:0043424: protein histidine kinase binding	4.27E-02
98	GO:0015293: symporter activity	4.41E-02
99	GO:0004540: ribonuclease activity	4.57E-02
100	GO:0004707: MAP kinase activity	4.57E-02
101	GO:0004176: ATP-dependent peptidase activity	4.57E-02