co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G06480

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:2001294: malonyl-CoA catabolic process	0.00E+00
2	GO:0090697: post-embryonic plant organ morphogenesis	0.00E+00
3	GO:0032928: regulation of superoxide anion generation	0.00E+00
4	GO:0008298: intracellular mRNA localization	0.00E+00
5	GO:2000469: negative regulation of peroxidase activity	0.00E+00
6	GO:0033494: ferulate metabolic process	0.00E+00
7	GO:2000121: regulation of removal of superoxide radicals	0.00E+00
8	GO:0010143: cutin biosynthetic process	5.88E-05
9	GO:0045038: protein import into chloroplast thylakoid membrane	8.49E-05
10	GO:0009395: phospholipid catabolic process	2.21E-04
11	GO:0007155: cell adhesion	2.80E-04
12	GO:0031426: polycistronic mRNA processing	2.84E-04
13	GO:1902458: positive regulation of stomatal opening	2.84E-04
14	GO:0010362: negative regulation of anion channel activity by blue light	2.84E-04
15	GO:0015969: guanosine tetraphosphate metabolic process	2.84E-04
16	GO:0009641: shade avoidance	5.73E-04
17	GO:1900033: negative regulation of trichome patterning	6.25E-04
18	GO:0016122: xanthophyll metabolic process	6.25E-04
19	GO:0010155: regulation of proton transport	6.25E-04
20	GO:1903426: regulation of reactive oxygen species biosynthetic process	6.25E-04
21	GO:0097503: sialylation	6.25E-04
22	GO:0009405: pathogenesis	1.01E-03
23	GO:0006753: nucleoside phosphate metabolic process	1.01E-03
24	GO:0046621: negative regulation of organ growth	1.01E-03
25	GO:0042753: positive regulation of circadian rhythm	1.19E-03
26	GO:0009963: positive regulation of flavonoid biosynthetic process	1.45E-03
27	GO:1990019: protein storage vacuole organization	1.45E-03
28	GO:0009647: skotomorphogenesis	1.45E-03
29	GO:0006168: adenine salvage	1.45E-03
30	GO:0006166: purine ribonucleoside salvage	1.45E-03
31	GO:0009311: oligosaccharide metabolic process	1.45E-03
32	GO:0010239: chloroplast mRNA processing	1.45E-03
33	GO:0009649: entrainment of circadian clock	1.94E-03
34	GO:0008295: spermidine biosynthetic process	1.94E-03
35	GO:0006021: inositol biosynthetic process	1.94E-03
36	GO:0048629: trichome patterning	1.94E-03
37	GO:0048442: sepal development	1.94E-03
38	GO:0009765: photosynthesis, light harvesting	1.94E-03
39	GO:0009585: red, far-red light phototransduction	2.14E-03
40	GO:0018279: protein N-linked glycosylation via asparagine	2.48E-03
41	GO:0010117: photoprotection	2.48E-03
42	GO:0046283: anthocyanin-containing compound metabolic process	2.48E-03
43	GO:0009904: chloroplast accumulation movement	2.48E-03
44	GO:1902183: regulation of shoot apical meristem development	2.48E-03
45	GO:0044209: AMP salvage	2.48E-03
46	GO:0006665: sphingolipid metabolic process	2.48E-03
47	GO:0010158: abaxial cell fate specification	2.48E-03
48	GO:0006465: signal peptide processing	2.48E-03
49	GO:0034052: positive regulation of plant-type hypersensitive response	2.48E-03
50	GO:0000741: karyogamy	3.06E-03
51	GO:0046855: inositol phosphate dephosphorylation	3.06E-03
52	GO:0006751: glutathione catabolic process	3.06E-03
53	GO:0010076: maintenance of floral meristem identity	3.68E-03
54	GO:0048280: vesicle fusion with Golgi apparatus	3.68E-03
55	GO:0009903: chloroplast avoidance movement	3.68E-03
56	GO:0030488: tRNA methylation	3.68E-03
57	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	3.68E-03
58	GO:0009648: photoperiodism	3.68E-03
59	GO:0009769: photosynthesis, light harvesting in photosystem II	4.34E-03
60	GO:0015937: coenzyme A biosynthetic process	4.34E-03
61	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	4.34E-03
62	GO:0009645: response to low light intensity stimulus	4.34E-03
63	GO:0006400: tRNA modification	4.34E-03
64	GO:0030307: positive regulation of cell growth	4.34E-03
65	GO:0048437: floral organ development	4.34E-03
66	GO:0043068: positive regulation of programmed cell death	5.03E-03
67	GO:0010078: maintenance of root meristem identity	5.03E-03
68	GO:2000070: regulation of response to water deprivation	5.03E-03
69	GO:0048564: photosystem I assembly	5.03E-03
70	GO:0006997: nucleus organization	5.77E-03
71	GO:0043562: cellular response to nitrogen levels	5.77E-03
72	GO:0015996: chlorophyll catabolic process	5.77E-03
73	GO:0007186: G-protein coupled receptor signaling pathway	5.77E-03
74	GO:0018298: protein-chromophore linkage	6.06E-03
75	GO:0048507: meristem development	6.54E-03
76	GO:0051865: protein autoubiquitination	6.54E-03
77	GO:0090305: nucleic acid phosphodiester bond hydrolysis	6.54E-03
78	GO:2000024: regulation of leaf development	6.54E-03
79	GO:0006098: pentose-phosphate shunt	6.54E-03
80	GO:0006811: ion transport	6.68E-03
81	GO:0045490: pectin catabolic process	6.71E-03
82	GO:0048527: lateral root development	7.01E-03
83	GO:0010119: regulation of stomatal movement	7.01E-03
84	GO:0009638: phototropism	7.35E-03
85	GO:0010018: far-red light signaling pathway	7.35E-03
86	GO:0009637: response to blue light	7.68E-03
87	GO:0048441: petal development	8.19E-03
88	GO:0009688: abscisic acid biosynthetic process	8.19E-03
89	GO:0006896: Golgi to vacuole transport	8.19E-03
90	GO:0009684: indoleacetic acid biosynthetic process	9.06E-03
91	GO:0006631: fatty acid metabolic process	9.14E-03
92	GO:0016024: CDP-diacylglycerol biosynthetic process	9.96E-03
93	GO:0045037: protein import into chloroplast stroma	9.96E-03
94	GO:0006790: sulfur compound metabolic process	9.96E-03
95	GO:0009644: response to high light intensity	1.07E-02
96	GO:0009785: blue light signaling pathway	1.09E-02
97	GO:0006094: gluconeogenesis	1.09E-02
98	GO:0009767: photosynthetic electron transport chain	1.09E-02
99	GO:0010588: cotyledon vascular tissue pattern formation	1.09E-02
100	GO:0010207: photosystem II assembly	1.19E-02
101	GO:0010223: secondary shoot formation	1.19E-02
102	GO:0009887: animal organ morphogenesis	1.19E-02
103	GO:0048467: gynoecium development	1.19E-02
104	GO:0048440: carpel development	1.19E-02
105	GO:0006541: glutamine metabolic process	1.19E-02
106	GO:0019853: L-ascorbic acid biosynthetic process	1.29E-02
107	GO:0046854: phosphatidylinositol phosphorylation	1.29E-02
108	GO:0010025: wax biosynthetic process	1.39E-02
109	GO:0000162: tryptophan biosynthetic process	1.39E-02
110	GO:0000027: ribosomal large subunit assembly	1.50E-02
111	GO:0009944: polarity specification of adaxial/abaxial axis	1.50E-02
112	GO:0007017: microtubule-based process	1.60E-02
113	GO:0009768: photosynthesis, light harvesting in photosystem I	1.60E-02
114	GO:0048367: shoot system development	1.64E-02
115	GO:0048511: rhythmic process	1.72E-02
116	GO:0019915: lipid storage	1.72E-02
117	GO:0009269: response to desiccation	1.72E-02
118	GO:0009814: defense response, incompatible interaction	1.83E-02
119	GO:0016226: iron-sulfur cluster assembly	1.83E-02
120	GO:0009294: DNA mediated transformation	1.95E-02
121	GO:0071369: cellular response to ethylene stimulus	1.95E-02
122	GO:0009742: brassinosteroid mediated signaling pathway	2.03E-02
123	GO:0019722: calcium-mediated signaling	2.07E-02
124	GO:0048443: stamen development	2.07E-02
125	GO:0042147: retrograde transport, endosome to Golgi	2.19E-02
126	GO:0080022: primary root development	2.31E-02
127	GO:0010087: phloem or xylem histogenesis	2.31E-02
128	GO:0010154: fruit development	2.44E-02
129	GO:0009958: positive gravitropism	2.44E-02
130	GO:0006520: cellular amino acid metabolic process	2.44E-02
131	GO:0010197: polar nucleus fusion	2.44E-02
132	GO:0010182: sugar mediated signaling pathway	2.44E-02
133	GO:0009741: response to brassinosteroid	2.44E-02
134	GO:0006629: lipid metabolic process	2.52E-02
135	GO:0007018: microtubule-based movement	2.57E-02
136	GO:0009646: response to absence of light	2.57E-02
137	GO:0048825: cotyledon development	2.70E-02
138	GO:0009851: auxin biosynthetic process	2.70E-02
139	GO:0006623: protein targeting to vacuole	2.70E-02
140	GO:0009791: post-embryonic development	2.70E-02
141	GO:0006891: intra-Golgi vesicle-mediated transport	2.83E-02
142	GO:0010583: response to cyclopentenone	2.97E-02
143	GO:0007264: small GTPase mediated signal transduction	2.97E-02
144	GO:0010252: auxin homeostasis	3.25E-02
145	GO:0009639: response to red or far red light	3.25E-02
146	GO:0016125: sterol metabolic process	3.25E-02
147	GO:0007267: cell-cell signaling	3.39E-02
148	GO:0010027: thylakoid membrane organization	3.68E-02
149	GO:0009617: response to bacterium	3.94E-02
150	GO:0009627: systemic acquired resistance	3.98E-02
151	GO:0006888: ER to Golgi vesicle-mediated transport	4.13E-02
152	GO:0048573: photoperiodism, flowering	4.13E-02
153	GO:0016311: dephosphorylation	4.29E-02
154	GO:0010311: lateral root formation	4.60E-02
155	GO:0000160: phosphorelay signal transduction system	4.60E-02
156	GO:0045944: positive regulation of transcription from RNA polymerase II promoter	4.72E-02
157	GO:0010218: response to far red light	4.76E-02
158	GO:0007165: signal transduction	4.82E-02
159	GO:0007568: aging	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0036361: racemase activity, acting on amino acids and derivatives	0.00E+00
2	GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives	0.00E+00
3	GO:0000293: ferric-chelate reductase activity	1.23E-04
4	GO:0003993: acid phosphatase activity	1.37E-04
5	GO:0030570: pectate lyase activity	1.70E-04
6	GO:0010945: CoA pyrophosphatase activity	2.84E-04
7	GO:0031957: very long-chain fatty acid-CoA ligase activity	2.84E-04
8	GO:0019210: kinase inhibitor activity	2.84E-04
9	GO:0004328: formamidase activity	2.84E-04
10	GO:0010347: L-galactose-1-phosphate phosphatase activity	2.84E-04
11	GO:0047259: glucomannan 4-beta-mannosyltransferase activity	2.84E-04
12	GO:0016788: hydrolase activity, acting on ester bonds	5.41E-04
13	GO:0052833: inositol monophosphate 4-phosphatase activity	6.25E-04
14	GO:0015929: hexosaminidase activity	6.25E-04
15	GO:0004563: beta-N-acetylhexosaminidase activity	6.25E-04
16	GO:0080097: L-tryptophan:pyruvate aminotransferase activity	6.25E-04
17	GO:0004081: bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity	6.25E-04
18	GO:0008373: sialyltransferase activity	6.25E-04
19	GO:0008728: GTP diphosphokinase activity	6.25E-04
20	GO:0003839: gamma-glutamylcyclotransferase activity	6.25E-04
21	GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity	6.25E-04
22	GO:0004766: spermidine synthase activity	6.25E-04
23	GO:0052832: inositol monophosphate 3-phosphatase activity	6.25E-04
24	GO:0034432: bis(5'-adenosyl)-pentaphosphatase activity	6.25E-04
25	GO:0008934: inositol monophosphate 1-phosphatase activity	6.25E-04
26	GO:0032947: protein complex scaffold	1.01E-03
27	GO:0090729: toxin activity	1.01E-03
28	GO:0004049: anthranilate synthase activity	1.01E-03
29	GO:0050734: hydroxycinnamoyltransferase activity	1.01E-03
30	GO:0003999: adenine phosphoribosyltransferase activity	1.45E-03
31	GO:0008893: guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity	1.45E-03
32	GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	1.45E-03
33	GO:0009882: blue light photoreceptor activity	1.45E-03
34	GO:0048027: mRNA 5'-UTR binding	1.45E-03
35	GO:0003777: microtubule motor activity	2.43E-03
36	GO:0016846: carbon-sulfur lyase activity	2.48E-03
37	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	3.06E-03
38	GO:0000210: NAD+ diphosphatase activity	3.06E-03
39	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	3.06E-03
40	GO:0004332: fructose-bisphosphate aldolase activity	3.06E-03
41	GO:0102391: decanoate--CoA ligase activity	3.68E-03
42	GO:0051753: mannan synthase activity	3.68E-03
43	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	3.68E-03
44	GO:0004467: long-chain fatty acid-CoA ligase activity	4.34E-03
45	GO:0016829: lyase activity	4.92E-03
46	GO:0008173: RNA methyltransferase activity	5.77E-03
47	GO:0047196: long-chain-alcohol O-fatty-acyltransferase activity	5.77E-03
48	GO:0103095: wax ester synthase activity	5.77E-03
49	GO:0008017: microtubule binding	7.11E-03
50	GO:0016491: oxidoreductase activity	7.62E-03
51	GO:0042802: identical protein binding	9.10E-03
52	GO:0000976: transcription regulatory region sequence-specific DNA binding	9.96E-03
53	GO:0035091: phosphatidylinositol binding	1.07E-02
54	GO:0008081: phosphoric diester hydrolase activity	1.09E-02
55	GO:0031072: heat shock protein binding	1.09E-02
56	GO:0000155: phosphorelay sensor kinase activity	1.09E-02
57	GO:0031624: ubiquitin conjugating enzyme binding	1.19E-02
58	GO:0008146: sulfotransferase activity	1.29E-02
59	GO:0031409: pigment binding	1.39E-02
60	GO:0051536: iron-sulfur cluster binding	1.50E-02
61	GO:0005528: FK506 binding	1.50E-02
62	GO:0016746: transferase activity, transferring acyl groups	1.97E-02
63	GO:0008080: N-acetyltransferase activity	2.44E-02
64	GO:0010181: FMN binding	2.57E-02
65	GO:0046872: metal ion binding	2.63E-02
66	GO:0019901: protein kinase binding	2.70E-02
67	GO:0004518: nuclease activity	2.97E-02
68	GO:0016791: phosphatase activity	3.25E-02
69	GO:0016722: oxidoreductase activity, oxidizing metal ions	3.39E-02
70	GO:0016168: chlorophyll binding	3.83E-02
71	GO:0005506: iron ion binding	4.16E-02
72	GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding	4.29E-02
73	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	4.29E-02
74	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	4.76E-02