GO Enrichment Analysis of Co-expressed Genes with
AT5G06340
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008298: intracellular mRNA localization | 0.00E+00 |
| 2 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 3 | GO:0033494: ferulate metabolic process | 0.00E+00 |
| 4 | GO:0090470: shoot organ boundary specification | 0.00E+00 |
| 5 | GO:2000042: negative regulation of double-strand break repair via homologous recombination | 0.00E+00 |
| 6 | GO:0031054: pre-miRNA processing | 0.00E+00 |
| 7 | GO:0032928: regulation of superoxide anion generation | 0.00E+00 |
| 8 | GO:0006021: inositol biosynthetic process | 5.52E-05 |
| 9 | GO:0010143: cutin biosynthetic process | 6.11E-05 |
| 10 | GO:0010207: photosystem II assembly | 6.11E-05 |
| 11 | GO:0015995: chlorophyll biosynthetic process | 7.13E-05 |
| 12 | GO:0046855: inositol phosphate dephosphorylation | 1.27E-04 |
| 13 | GO:0016559: peroxisome fission | 2.87E-04 |
| 14 | GO:0000481: maturation of 5S rRNA | 2.89E-04 |
| 15 | GO:0015801: aromatic amino acid transport | 2.89E-04 |
| 16 | GO:0043686: co-translational protein modification | 2.89E-04 |
| 17 | GO:0046167: glycerol-3-phosphate biosynthetic process | 2.89E-04 |
| 18 | GO:0043007: maintenance of rDNA | 2.89E-04 |
| 19 | GO:1902458: positive regulation of stomatal opening | 2.89E-04 |
| 20 | GO:0034337: RNA folding | 2.89E-04 |
| 21 | GO:0010362: negative regulation of anion channel activity by blue light | 2.89E-04 |
| 22 | GO:0015969: guanosine tetraphosphate metabolic process | 2.89E-04 |
| 23 | GO:0031426: polycistronic mRNA processing | 2.89E-04 |
| 24 | GO:0090342: regulation of cell aging | 6.34E-04 |
| 25 | GO:0016122: xanthophyll metabolic process | 6.34E-04 |
| 26 | GO:0010155: regulation of proton transport | 6.34E-04 |
| 27 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 6.34E-04 |
| 28 | GO:0015790: UDP-xylose transport | 6.34E-04 |
| 29 | GO:0006650: glycerophospholipid metabolic process | 6.34E-04 |
| 30 | GO:0030187: melatonin biosynthetic process | 6.34E-04 |
| 31 | GO:0006790: sulfur compound metabolic process | 7.74E-04 |
| 32 | GO:0009266: response to temperature stimulus | 9.86E-04 |
| 33 | GO:0044375: regulation of peroxisome size | 1.03E-03 |
| 34 | GO:0046168: glycerol-3-phosphate catabolic process | 1.03E-03 |
| 35 | GO:0009405: pathogenesis | 1.03E-03 |
| 36 | GO:0010589: leaf proximal/distal pattern formation | 1.03E-03 |
| 37 | GO:0046854: phosphatidylinositol phosphorylation | 1.10E-03 |
| 38 | GO:0006631: fatty acid metabolic process | 1.36E-03 |
| 39 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 1.47E-03 |
| 40 | GO:0010371: regulation of gibberellin biosynthetic process | 1.47E-03 |
| 41 | GO:0006020: inositol metabolic process | 1.47E-03 |
| 42 | GO:0009152: purine ribonucleotide biosynthetic process | 1.47E-03 |
| 43 | GO:0046653: tetrahydrofolate metabolic process | 1.47E-03 |
| 44 | GO:0010239: chloroplast mRNA processing | 1.47E-03 |
| 45 | GO:0006072: glycerol-3-phosphate metabolic process | 1.47E-03 |
| 46 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 1.47E-03 |
| 47 | GO:0010731: protein glutathionylation | 1.47E-03 |
| 48 | GO:0046739: transport of virus in multicellular host | 1.47E-03 |
| 49 | GO:0048511: rhythmic process | 1.64E-03 |
| 50 | GO:0009765: photosynthesis, light harvesting | 1.97E-03 |
| 51 | GO:0035279: mRNA cleavage involved in gene silencing by miRNA | 1.97E-03 |
| 52 | GO:0008295: spermidine biosynthetic process | 1.97E-03 |
| 53 | GO:0032366: intracellular sterol transport | 1.97E-03 |
| 54 | GO:0055114: oxidation-reduction process | 2.13E-03 |
| 55 | GO:0006564: L-serine biosynthetic process | 2.52E-03 |
| 56 | GO:0009904: chloroplast accumulation movement | 2.52E-03 |
| 57 | GO:0010236: plastoquinone biosynthetic process | 2.52E-03 |
| 58 | GO:0045038: protein import into chloroplast thylakoid membrane | 2.52E-03 |
| 59 | GO:0031365: N-terminal protein amino acid modification | 2.52E-03 |
| 60 | GO:0016123: xanthophyll biosynthetic process | 2.52E-03 |
| 61 | GO:0006465: signal peptide processing | 2.52E-03 |
| 62 | GO:0000304: response to singlet oxygen | 2.52E-03 |
| 63 | GO:0080110: sporopollenin biosynthetic process | 2.52E-03 |
| 64 | GO:0016120: carotene biosynthetic process | 2.52E-03 |
| 65 | GO:0010117: photoprotection | 2.52E-03 |
| 66 | GO:0006520: cellular amino acid metabolic process | 2.67E-03 |
| 67 | GO:0042549: photosystem II stabilization | 3.11E-03 |
| 68 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 3.11E-03 |
| 69 | GO:0045962: positive regulation of development, heterochronic | 3.11E-03 |
| 70 | GO:0009903: chloroplast avoidance movement | 3.74E-03 |
| 71 | GO:0030488: tRNA methylation | 3.74E-03 |
| 72 | GO:0009648: photoperiodism | 3.74E-03 |
| 73 | GO:0010310: regulation of hydrogen peroxide metabolic process | 3.74E-03 |
| 74 | GO:0000054: ribosomal subunit export from nucleus | 3.74E-03 |
| 75 | GO:0048280: vesicle fusion with Golgi apparatus | 3.74E-03 |
| 76 | GO:0006400: tRNA modification | 4.41E-03 |
| 77 | GO:0035196: production of miRNAs involved in gene silencing by miRNA | 4.41E-03 |
| 78 | GO:0050790: regulation of catalytic activity | 4.41E-03 |
| 79 | GO:0009395: phospholipid catabolic process | 4.41E-03 |
| 80 | GO:0032508: DNA duplex unwinding | 5.12E-03 |
| 81 | GO:2000070: regulation of response to water deprivation | 5.12E-03 |
| 82 | GO:0042255: ribosome assembly | 5.12E-03 |
| 83 | GO:0006353: DNA-templated transcription, termination | 5.12E-03 |
| 84 | GO:0006526: arginine biosynthetic process | 5.87E-03 |
| 85 | GO:0015996: chlorophyll catabolic process | 5.87E-03 |
| 86 | GO:0007186: G-protein coupled receptor signaling pathway | 5.87E-03 |
| 87 | GO:0009657: plastid organization | 5.87E-03 |
| 88 | GO:0006633: fatty acid biosynthetic process | 6.14E-03 |
| 89 | GO:0000160: phosphorelay signal transduction system | 6.53E-03 |
| 90 | GO:0006098: pentose-phosphate shunt | 6.65E-03 |
| 91 | GO:0009821: alkaloid biosynthetic process | 6.65E-03 |
| 92 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 6.65E-03 |
| 93 | GO:0048507: meristem development | 6.65E-03 |
| 94 | GO:0010206: photosystem II repair | 6.65E-03 |
| 95 | GO:0006811: ion transport | 6.85E-03 |
| 96 | GO:0007623: circadian rhythm | 6.93E-03 |
| 97 | GO:0007568: aging | 7.19E-03 |
| 98 | GO:0009638: phototropism | 7.48E-03 |
| 99 | GO:0010267: production of ta-siRNAs involved in RNA interference | 7.48E-03 |
| 100 | GO:0009688: abscisic acid biosynthetic process | 8.33E-03 |
| 101 | GO:0043069: negative regulation of programmed cell death | 8.33E-03 |
| 102 | GO:0009641: shade avoidance | 8.33E-03 |
| 103 | GO:0010629: negative regulation of gene expression | 8.33E-03 |
| 104 | GO:0006896: Golgi to vacuole transport | 8.33E-03 |
| 105 | GO:0006535: cysteine biosynthetic process from serine | 8.33E-03 |
| 106 | GO:0009773: photosynthetic electron transport in photosystem I | 9.22E-03 |
| 107 | GO:0008285: negative regulation of cell proliferation | 9.22E-03 |
| 108 | GO:0006415: translational termination | 9.22E-03 |
| 109 | GO:0016024: CDP-diacylglycerol biosynthetic process | 1.01E-02 |
| 110 | GO:0045037: protein import into chloroplast stroma | 1.01E-02 |
| 111 | GO:0018107: peptidyl-threonine phosphorylation | 1.11E-02 |
| 112 | GO:0009718: anthocyanin-containing compound biosynthetic process | 1.11E-02 |
| 113 | GO:0006094: gluconeogenesis | 1.11E-02 |
| 114 | GO:0009767: photosynthetic electron transport chain | 1.11E-02 |
| 115 | GO:0030048: actin filament-based movement | 1.11E-02 |
| 116 | GO:0009785: blue light signaling pathway | 1.11E-02 |
| 117 | GO:0009636: response to toxic substance | 1.15E-02 |
| 118 | GO:0010223: secondary shoot formation | 1.21E-02 |
| 119 | GO:0010020: chloroplast fission | 1.21E-02 |
| 120 | GO:0007031: peroxisome organization | 1.31E-02 |
| 121 | GO:0019853: L-ascorbic acid biosynthetic process | 1.31E-02 |
| 122 | GO:0010025: wax biosynthetic process | 1.41E-02 |
| 123 | GO:0042753: positive regulation of circadian rhythm | 1.41E-02 |
| 124 | GO:0006636: unsaturated fatty acid biosynthetic process | 1.41E-02 |
| 125 | GO:0006289: nucleotide-excision repair | 1.52E-02 |
| 126 | GO:0019344: cysteine biosynthetic process | 1.52E-02 |
| 127 | GO:0010073: meristem maintenance | 1.63E-02 |
| 128 | GO:0003333: amino acid transmembrane transport | 1.75E-02 |
| 129 | GO:0031408: oxylipin biosynthetic process | 1.75E-02 |
| 130 | GO:0010017: red or far-red light signaling pathway | 1.86E-02 |
| 131 | GO:0015979: photosynthesis | 1.88E-02 |
| 132 | GO:0010227: floral organ abscission | 1.98E-02 |
| 133 | GO:0006396: RNA processing | 2.02E-02 |
| 134 | GO:0009742: brassinosteroid mediated signaling pathway | 2.08E-02 |
| 135 | GO:0009306: protein secretion | 2.10E-02 |
| 136 | GO:0010584: pollen exine formation | 2.10E-02 |
| 137 | GO:0019722: calcium-mediated signaling | 2.10E-02 |
| 138 | GO:0016117: carotenoid biosynthetic process | 2.23E-02 |
| 139 | GO:0042147: retrograde transport, endosome to Golgi | 2.23E-02 |
| 140 | GO:0000413: protein peptidyl-prolyl isomerization | 2.35E-02 |
| 141 | GO:0010182: sugar mediated signaling pathway | 2.48E-02 |
| 142 | GO:0010305: leaf vascular tissue pattern formation | 2.48E-02 |
| 143 | GO:0016042: lipid catabolic process | 2.50E-02 |
| 144 | GO:0009058: biosynthetic process | 2.59E-02 |
| 145 | GO:0006629: lipid metabolic process | 2.60E-02 |
| 146 | GO:0007018: microtubule-based movement | 2.61E-02 |
| 147 | GO:0008654: phospholipid biosynthetic process | 2.75E-02 |
| 148 | GO:0006623: protein targeting to vacuole | 2.75E-02 |
| 149 | GO:0009791: post-embryonic development | 2.75E-02 |
| 150 | GO:0006891: intra-Golgi vesicle-mediated transport | 2.88E-02 |
| 151 | GO:0032502: developmental process | 3.02E-02 |
| 152 | GO:0016032: viral process | 3.02E-02 |
| 153 | GO:0006413: translational initiation | 3.16E-02 |
| 154 | GO:0007267: cell-cell signaling | 3.45E-02 |
| 155 | GO:0010027: thylakoid membrane organization | 3.75E-02 |
| 156 | GO:0016126: sterol biosynthetic process | 3.75E-02 |
| 157 | GO:0006888: ER to Golgi vesicle-mediated transport | 4.21E-02 |
| 158 | GO:0016311: dephosphorylation | 4.37E-02 |
| 159 | GO:0018298: protein-chromophore linkage | 4.53E-02 |
| 160 | GO:0009813: flavonoid biosynthetic process | 4.69E-02 |
| 161 | GO:0010311: lateral root formation | 4.69E-02 |
| 162 | GO:0009735: response to cytokinin | 4.72E-02 |
| 163 | GO:0009407: toxin catabolic process | 4.85E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives | 0.00E+00 |
| 2 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 3 | GO:0004740: pyruvate dehydrogenase (acetyl-transferring) kinase activity | 0.00E+00 |
| 4 | GO:0004059: aralkylamine N-acetyltransferase activity | 0.00E+00 |
| 5 | GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity | 0.00E+00 |
| 6 | GO:0045435: lycopene epsilon cyclase activity | 0.00E+00 |
| 7 | GO:0036361: racemase activity, acting on amino acids and derivatives | 0.00E+00 |
| 8 | GO:0050613: delta14-sterol reductase activity | 0.00E+00 |
| 9 | GO:0052832: inositol monophosphate 3-phosphatase activity | 3.83E-06 |
| 10 | GO:0008934: inositol monophosphate 1-phosphatase activity | 3.83E-06 |
| 11 | GO:0052833: inositol monophosphate 4-phosphatase activity | 3.83E-06 |
| 12 | GO:0016851: magnesium chelatase activity | 3.07E-05 |
| 13 | GO:0000293: ferric-chelate reductase activity | 1.27E-04 |
| 14 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 1.74E-04 |
| 15 | GO:0016491: oxidoreductase activity | 2.40E-04 |
| 16 | GO:0004328: formamidase activity | 2.89E-04 |
| 17 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 2.89E-04 |
| 18 | GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity | 2.89E-04 |
| 19 | GO:0080132: fatty acid alpha-hydroxylase activity | 2.89E-04 |
| 20 | GO:0042586: peptide deformylase activity | 2.89E-04 |
| 21 | GO:0031957: very long-chain fatty acid-CoA ligase activity | 2.89E-04 |
| 22 | GO:0016788: hydrolase activity, acting on ester bonds | 5.66E-04 |
| 23 | GO:0008728: GTP diphosphokinase activity | 6.34E-04 |
| 24 | GO:0050017: L-3-cyanoalanine synthase activity | 6.34E-04 |
| 25 | GO:0042389: omega-3 fatty acid desaturase activity | 6.34E-04 |
| 26 | GO:0004617: phosphoglycerate dehydrogenase activity | 6.34E-04 |
| 27 | GO:0004766: spermidine synthase activity | 6.34E-04 |
| 28 | GO:0015173: aromatic amino acid transmembrane transporter activity | 6.34E-04 |
| 29 | GO:0043024: ribosomal small subunit binding | 6.34E-04 |
| 30 | GO:0005464: UDP-xylose transmembrane transporter activity | 6.34E-04 |
| 31 | GO:0004751: ribose-5-phosphate isomerase activity | 1.03E-03 |
| 32 | GO:0030267: glyoxylate reductase (NADP) activity | 1.03E-03 |
| 33 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 1.03E-03 |
| 34 | GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity | 1.03E-03 |
| 35 | GO:0008864: formyltetrahydrofolate deformylase activity | 1.03E-03 |
| 36 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 1.03E-03 |
| 37 | GO:0050734: hydroxycinnamoyltransferase activity | 1.03E-03 |
| 38 | GO:0005504: fatty acid binding | 1.03E-03 |
| 39 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 1.03E-03 |
| 40 | GO:0003993: acid phosphatase activity | 1.16E-03 |
| 41 | GO:0009882: blue light photoreceptor activity | 1.47E-03 |
| 42 | GO:0035198: miRNA binding | 1.47E-03 |
| 43 | GO:0048027: mRNA 5'-UTR binding | 1.47E-03 |
| 44 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 1.47E-03 |
| 45 | GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 1.47E-03 |
| 46 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.84E-03 |
| 47 | GO:0051287: NAD binding | 1.92E-03 |
| 48 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.97E-03 |
| 49 | GO:0070628: proteasome binding | 1.97E-03 |
| 50 | GO:0045430: chalcone isomerase activity | 1.97E-03 |
| 51 | GO:0003727: single-stranded RNA binding | 2.12E-03 |
| 52 | GO:0005275: amine transmembrane transporter activity | 2.52E-03 |
| 53 | GO:0008080: N-acetyltransferase activity | 2.67E-03 |
| 54 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 3.11E-03 |
| 55 | GO:0004332: fructose-bisphosphate aldolase activity | 3.11E-03 |
| 56 | GO:0031593: polyubiquitin binding | 3.11E-03 |
| 57 | GO:0035673: oligopeptide transmembrane transporter activity | 3.11E-03 |
| 58 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 3.11E-03 |
| 59 | GO:0048038: quinone binding | 3.30E-03 |
| 60 | GO:0016887: ATPase activity | 3.42E-03 |
| 61 | GO:0004124: cysteine synthase activity | 3.74E-03 |
| 62 | GO:0102391: decanoate--CoA ligase activity | 3.74E-03 |
| 63 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 3.74E-03 |
| 64 | GO:0009927: histidine phosphotransfer kinase activity | 3.74E-03 |
| 65 | GO:0004467: long-chain fatty acid-CoA ligase activity | 4.41E-03 |
| 66 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 5.87E-03 |
| 67 | GO:0008173: RNA methyltransferase activity | 5.87E-03 |
| 68 | GO:0016844: strictosidine synthase activity | 7.48E-03 |
| 69 | GO:0047372: acylglycerol lipase activity | 9.22E-03 |
| 70 | GO:0042802: identical protein binding | 9.40E-03 |
| 71 | GO:0004364: glutathione transferase activity | 9.77E-03 |
| 72 | GO:0015198: oligopeptide transporter activity | 1.01E-02 |
| 73 | GO:0035091: phosphatidylinositol binding | 1.10E-02 |
| 74 | GO:0000155: phosphorelay sensor kinase activity | 1.11E-02 |
| 75 | GO:0019888: protein phosphatase regulator activity | 1.11E-02 |
| 76 | GO:0004565: beta-galactosidase activity | 1.11E-02 |
| 77 | GO:0003725: double-stranded RNA binding | 1.11E-02 |
| 78 | GO:0008081: phosphoric diester hydrolase activity | 1.11E-02 |
| 79 | GO:0003774: motor activity | 1.21E-02 |
| 80 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 1.21E-02 |
| 81 | GO:0008146: sulfotransferase activity | 1.31E-02 |
| 82 | GO:0043130: ubiquitin binding | 1.52E-02 |
| 83 | GO:0005528: FK506 binding | 1.52E-02 |
| 84 | GO:0051087: chaperone binding | 1.63E-02 |
| 85 | GO:0052689: carboxylic ester hydrolase activity | 1.80E-02 |
| 86 | GO:0030570: pectate lyase activity | 1.98E-02 |
| 87 | GO:0042803: protein homodimerization activity | 2.12E-02 |
| 88 | GO:0010181: FMN binding | 2.61E-02 |
| 89 | GO:0050662: coenzyme binding | 2.61E-02 |
| 90 | GO:0008565: protein transporter activity | 2.94E-02 |
| 91 | GO:0004518: nuclease activity | 3.02E-02 |
| 92 | GO:0000156: phosphorelay response regulator activity | 3.16E-02 |
| 93 | GO:0003684: damaged DNA binding | 3.31E-02 |
| 94 | GO:0016791: phosphatase activity | 3.31E-02 |
| 95 | GO:0008017: microtubule binding | 3.55E-02 |
| 96 | GO:0016597: amino acid binding | 3.60E-02 |
| 97 | GO:0005506: iron ion binding | 4.31E-02 |
| 98 | GO:0008236: serine-type peptidase activity | 4.37E-02 |
| 99 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 4.37E-02 |
| 100 | GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding | 4.37E-02 |